Literature DB >> 32276545

Current perspectives on the cellular and molecular features of epigenetic ageing.

Kenneth Raj1, Steve Horvath2.   

Abstract

IMPACT STATEMENT: The field of epigenetic ageing is relatively new, and the speed of its expansion presents a challenge in keeping abreast with new discoveries and their implications. Several reviews have already addressed the great number of pathologies, health conditions, life-style, and external stressors that are associated with changes to the rate of epigenetic ageing. While these associations highlight and affirm the ability of epigenetic clock to capture biologically meaningful changes associated with age, they do not inform us about the underlying mechanisms. In this very early period since the development of the clock, there have been rather limited experimental research that are aimed at uncovering the mechanism. Hence, the perspective that we proffer is derived from available but nevertheless limited lines of evidence that together provide a seemingly coherent narrative that can be tested. This, we believe would be helpful towards uncovering the workings of the epigenetic clock.

Keywords:  DNA methylation; Epigenetics; ageing

Year:  2020        PMID: 32276545      PMCID: PMC7787550          DOI: 10.1177/1535370220918329

Source DB:  PubMed          Journal:  Exp Biol Med (Maywood)        ISSN: 1535-3699


  114 in total

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Authors:  Carl Hirschie Johnson; Jeffrey A Elliott; Russell Foster
Journal:  Chronobiol Int       Date:  2003-09       Impact factor: 2.877

2.  Age-dependent DNA methylation of genes that are suppressed in stem cells is a hallmark of cancer.

Authors:  Andrew E Teschendorff; Usha Menon; Aleksandra Gentry-Maharaj; Susan J Ramus; Daniel J Weisenberger; Hui Shen; Mihaela Campan; Houtan Noushmehr; Christopher G Bell; A Peter Maxwell; David A Savage; Elisabeth Mueller-Holzner; Christian Marth; Gabrijela Kocjan; Simon A Gayther; Allison Jones; Stephan Beck; Wolfgang Wagner; Peter W Laird; Ian J Jacobs; Martin Widschwendter
Journal:  Genome Res       Date:  2010-03-10       Impact factor: 9.043

Review 3.  Hypoxia signalling through mTOR and the unfolded protein response in cancer.

Authors:  Bradly G Wouters; Marianne Koritzinsky
Journal:  Nat Rev Cancer       Date:  2008-10-10       Impact factor: 60.716

4.  Regulation of mTOR function in response to hypoxia by REDD1 and the TSC1/TSC2 tumor suppressor complex.

Authors:  James Brugarolas; Kui Lei; Rebecca L Hurley; Brendan D Manning; Jan H Reiling; Ernst Hafen; Lee A Witters; Leif W Ellisen; William G Kaelin
Journal:  Genes Dev       Date:  2004-11-15       Impact factor: 11.361

5.  Calorie restriction regulates circadian clock gene expression through BMAL1 dependent and independent mechanisms.

Authors:  Sonal A Patel; Nikkhil Velingkaar; Kuldeep Makwana; Amol Chaudhari; Roman Kondratov
Journal:  Sci Rep       Date:  2016-05-12       Impact factor: 4.379

6.  Multi-tissue DNA methylation age predictor in mouse.

Authors:  Thomas M Stubbs; Marc Jan Bonder; Anne-Katrien Stark; Felix Krueger; Ferdinand von Meyenn; Oliver Stegle; Wolf Reik
Journal:  Genome Biol       Date:  2017-04-11       Impact factor: 13.583

Review 7.  mTOR Signaling, Translational Control, and the Circadian Clock.

Authors:  Ruifeng Cao
Journal:  Front Genet       Date:  2018-09-10       Impact factor: 4.599

8.  mTOR kinase structure, mechanism and regulation.

Authors:  Haijuan Yang; Derek G Rudge; Joseph D Koos; Bhamini Vaidialingam; Hyo J Yang; Nikola P Pavletich
Journal:  Nature       Date:  2013-05-01       Impact factor: 49.962

9.  Epigenetic clock for skin and blood cells applied to Hutchinson Gilford Progeria Syndrome and ex vivo studies.

Authors:  Steve Horvath; Junko Oshima; George M Martin; Ake T Lu; Austin Quach; Howard Cohen; Sarah Felton; Mieko Matsuyama; Donna Lowe; Sylwia Kabacik; James G Wilson; Alex P Reiner; Anna Maierhofer; Julia Flunkert; Abraham Aviv; Lifang Hou; Andrea A Baccarelli; Yun Li; James D Stewart; Eric A Whitsel; Luigi Ferrucci; Shigemi Matsuyama; Kenneth Raj
Journal:  Aging (Albany NY)       Date:  2018-07-26       Impact factor: 5.682

10.  DNA methylation GrimAge strongly predicts lifespan and healthspan.

Authors:  Ake T Lu; Austin Quach; James G Wilson; Alex P Reiner; Abraham Aviv; Kenneth Raj; Lifang Hou; Andrea A Baccarelli; Yun Li; James D Stewart; Eric A Whitsel; Themistocles L Assimes; Luigi Ferrucci; Steve Horvath
Journal:  Aging (Albany NY)       Date:  2019-01-21       Impact factor: 5.682

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  12 in total

1.  Mechanisms of aging, age-associated diseases, and lifespan determination.

Authors:  Shigemi Matsuyama
Journal:  Exp Biol Med (Maywood)       Date:  2020-09-09

2.  Cortisol trajectories measured prospectively across thirty years of female development following exposure to childhood sexual abuse: Moderation by epigenetic age acceleration at midlife.

Authors:  Chad E Shenk; John M Felt; Nilam Ram; Kieran J O'Donnell; Martin J Sliwinski; Irina Pokhvisneva; Lizbeth Benson; Michael J Meaney; Frank W Putnam; Jennie G Noll
Journal:  Psychoneuroendocrinology       Date:  2021-11-26       Impact factor: 4.905

Review 3.  Aging and cancer epigenetics: Where do the paths fork?

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Review 4.  No Time to Age: Uncoupling Aging from Chronological Time.

Authors:  Dana Larocca; Jieun Lee; Michael D West; Ivan Labat; Hal Sternberg
Journal:  Genes (Basel)       Date:  2021-04-21       Impact factor: 4.096

5.  Socioeconomic Disadvantage and the Pace of Biological Aging in Children.

Authors:  Laurel Raffington; Daniel W Belsky; Meeraj Kothari; Margherita Malanchini; Elliot M Tucker-Drob; K Paige Harden
Journal:  Pediatrics       Date:  2021-05-17       Impact factor: 9.703

Review 6.  Aging biomarkers and the brain.

Authors:  Albert T Higgins-Chen; Kyra L Thrush; Morgan E Levine
Journal:  Semin Cell Dev Biol       Date:  2021-01-25       Impact factor: 7.499

7.  DNA methylation aging and transcriptomic studies in horses.

Authors:  Steve Horvath; Amin Haghani; Sichong Peng; Erin N Hales; Joseph A Zoller; Ken Raj; Brenda Larison; Todd R Robeck; Jessica L Petersen; Rebecca R Bellone; Carrie J Finno
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8.  Exposure to ionizing radiation disrupts normal epigenetic aging in Japanese medaka.

Authors:  Emily M Bertucci; Marilyn W Mason; Olin E Rhodes; Benjamin B Parrott
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9.  Disentangling tumorigenesis-associated DNA methylation changes in colorectal tissues from those associated with ageing.

Authors:  Stephany Orjuela; Hannah R Parker; Sija Sajibu; Fabrizio Cereatti; Matthias Sauter; Federico Buffoli; Mark D Robinson; Giancarlo Marra
Journal:  Epigenetics       Date:  2021-08-09       Impact factor: 4.861

10.  Aging and rejuvenation - a modular epigenome model.

Authors:  Priscila Chiavellini; Martina Canatelli-Mallat; Marianne Lehmann; Maria D Gallardo; Claudia B Herenu; Jose L Cordeiro; James Clement; Rodolfo G Goya
Journal:  Aging (Albany NY)       Date:  2021-02-24       Impact factor: 5.682

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