Literature DB >> 32275153

Impact of Cyanine Conformational Restraint in the Near-Infrared Range.

Siddharth S Matikonda1, Gabrielle Hammersley1, Nikita Kumari2, Lennart Grabenhorst3, Viktorija Glembockyte3, Philip Tinnefeld3, Joseph Ivanic4, Marcia Levitus2, Martin J Schnermann1.   

Abstract

Appending conformationally restraining ring systems to the cyanine chromophore creates exceptionally bright fluorophores in the visible range. Here, we report the application of this strategy in the near-infrared range through the preparation of the first restrained heptamethine indocyanine. Time-resolved absorption spectroscopy and fluorescence correlation spectroscopy verify that, unlike the corresponding parent unrestrained variant, the restrained molecule is not subject to photoisomerization. Notably, however, the room-temperature emission efficiency and the fluorescence lifetime of the restrained cyanine are not extended relative to the parent cyanine, even in viscous solvents. Thus, in contrast to prior reports, the photoisomerization of heptamethine cyanines does not contribute significantly to the excited-state chemistry of these molecules. We also find that the fluorescence lifetime of the restrained heptamethine cyanine is temperature-insensitive and significantly extended at moderately elevated temperatures relative to the parent cyanine. Finally, computational studies have been used to evaluate the impact of the conformational restraint on atomic and orbital structure across the cyanine series. These studies clarify the role of photoisomerization in the heptamethine cyanine scaffold and demonstrate the dramatic effect of restraint on the temperature sensitivity of these dyes.

Entities:  

Year:  2020        PMID: 32275153     DOI: 10.1021/acs.joc.0c00236

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  8 in total

1.  Establishing design principles for emissive organic SWIR chromophores from energy gap laws.

Authors:  Hannah C Friedman; Emily D Cosco; Timothy L Atallah; Shang Jia; Ellen M Sletten; Justin R Caram
Journal:  Chem       Date:  2021-09-23       Impact factor: 22.804

Review 2.  Extending optical chemical tools and technologies to mice by shifting to the shortwave infrared region.

Authors:  Kelly C Y Wong; Ellen M Sletten
Journal:  Curr Opin Chem Biol       Date:  2022-03-30       Impact factor: 8.972

Review 3.  FRET-based dynamic structural biology: Challenges, perspectives and an appeal for open-science practices.

Authors:  Eitan Lerner; Anders Barth; Jelle Hendrix; Benjamin Ambrose; Victoria Birkedal; Scott C Blanchard; Richard Börner; Hoi Sung Chung; Thorben Cordes; Timothy D Craggs; Ashok A Deniz; Jiajie Diao; Jingyi Fei; Ruben L Gonzalez; Irina V Gopich; Taekjip Ha; Christian A Hanke; Gilad Haran; Nikos S Hatzakis; Sungchul Hohng; Seok-Cheol Hong; Thorsten Hugel; Antonino Ingargiola; Chirlmin Joo; Achillefs N Kapanidis; Harold D Kim; Ted Laurence; Nam Ki Lee; Tae-Hee Lee; Edward A Lemke; Emmanuel Margeat; Jens Michaelis; Xavier Michalet; Sua Myong; Daniel Nettels; Thomas-Otavio Peulen; Evelyn Ploetz; Yair Razvag; Nicole C Robb; Benjamin Schuler; Hamid Soleimaninejad; Chun Tang; Reza Vafabakhsh; Don C Lamb; Claus Am Seidel; Shimon Weiss
Journal:  Elife       Date:  2021-03-29       Impact factor: 8.140

4.  Bright Chromenylium Polymethine Dyes Enable Fast, Four-Color In Vivo Imaging with Shortwave Infrared Detection.

Authors:  Emily D Cosco; Bernardo A Arús; Anthony L Spearman; Timothy L Atallah; Irene Lim; Olivia S Leland; Justin R Caram; Thomas S Bischof; Oliver T Bruns; Ellen M Sletten
Journal:  J Am Chem Soc       Date:  2021-05-03       Impact factor: 15.419

5.  Targetable Conformationally Restricted Cyanines Enable Photon-Count-Limited Applications*.

Authors:  Patrick Eiring; Ryan McLaughlin; Siddharth S Matikonda; Zhongying Han; Lennart Grabenhorst; Dominic A Helmerich; Mara Meub; Gerti Beliu; Michael Luciano; Venu Bandi; Niels Zijlstra; Zhen-Dan Shi; Sergey G Tarasov; Rolf Swenson; Philip Tinnefeld; Viktorija Glembockyte; Thorben Cordes; Markus Sauer; Martin J Schnermann
Journal:  Angew Chem Int Ed Engl       Date:  2021-11-17       Impact factor: 16.823

6.  Highly Fluorescent Dyes Containing Conformationally Restrained Pyrazolylpyrene (Pyrazoolympicene) Chromophore.

Authors:  Anna Wrona-Piotrowicz; Anna Makal; Janusz Zakrzewski
Journal:  Molecules       Date:  2022-02-14       Impact factor: 4.411

7.  Computational Design, Synthesis, and Photochemistry of Cy7-PPG, an Efficient NIR-Activated Photolabile Protecting Group for Therapeutic Applications.

Authors:  Georgios Alachouzos; Albert M Schulte; Anirban Mondal; Wiktor Szymanski; Ben L Feringa
Journal:  Angew Chem Int Ed Engl       Date:  2022-03-10       Impact factor: 16.823

Review 8.  Explorations into the Effect of meso-Substituents in Tricarbocyanine Dyes: A Path to Diverse Biomolecular Probes and Materials.

Authors:  Rüdiger M Exner; Fernando Cortezon-Tamarit; Sofia I Pascu
Journal:  Angew Chem Int Ed Engl       Date:  2020-12-28       Impact factor: 15.336

  8 in total

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