| Literature DB >> 32249705 |
Mustafa Durgun1, Cüneyt Türkeş2, Mesut Işık3, Yeliz Demir4, Ali Saklı1, Ali Kuru1,5, Abdussamat Güzel6, Şükrü Beydemir7, Suleyman Akocak8, Sameh M Osman9, Zeid AlOthman9, Claudiu T Supuran10.
Abstract
SulphonamidesEntities:
Keywords: Acetylcholinesterase; carbonic anhydrase; molecular docking; sulphonamide; synthesis
Mesh:
Substances:
Year: 2020 PMID: 32249705 PMCID: PMC7170330 DOI: 10.1080/14756366.2020.1746784
Source DB: PubMed Journal: J Enzyme Inhib Med Chem ISSN: 1475-6366 Impact factor: 5.051
Scheme 1.General synthetic procedure for target analogues (1–8).
KI values of hCA I, II and AChE with derivatives 1–8, AAZ and TAC as standard inhibitors.
| Compounds | AChE | |||||
|---|---|---|---|---|---|---|
| 59.7 ± 0.1 | 0.9993 | 16.4 ± 0.7 | 0.9995 | 24.3 ± 1.0 | 0.9995 | |
| 66.5 ± 0.9 | 0.9991 | 13.8 ± 0.1 | 0.9999 | 21.00 ± 0.9 | 0.9994 | |
| 80.5 ± 1.5 | 0.9991 | 26.3 ± 0.09 | 0.9999 | 34.9 ± 1.4 | 0.9996 | |
| 40.1 ± 0.6 | 0.9988 | 79.3 ± 0.2 | 0.9999 | 27.9 ± 1.3 | 0.9994 | |
| 52.1 ± 0.7 | 0.9992 | 19.8 ± 1.2 | 0.9993 | 61.2 ± 4.0 | 0.9993 | |
| 100.6 ± 1.9 | 0.9984 | 29.1 ± 0.3 | 0.9999 | 25.7 ± 1.0 | 0.9995 | |
| 62.32 ± 1.3 | 0.9981 | 10.1 ± 0.03 | 0.9999 | 77.0 ± 9.3 | 0.9984 | |
| 32.1 ± 0.4 | 0.9991 | 61.9 ± 0.2 | 0.9999 | 31.4 ± 1.2 | 0.9996 | |
| AAZ | 436.2 ± 12.2 | 0.9982 | 93.5 ± 1.2 | 0.9996 | – | – |
| TACb | – | – | – | – | 109.75 ± 2.39 | 0.9999 |
aAcetazolamide. bTacrine.
Selectivity index values for KI values of the compounds 1–8.
| Compounds | ||||
|---|---|---|---|---|
| 0.27 | 7.31 | 5.72 | 4.52 | |
| 0.21 | 6.55 | 6.77 | 5.23 | |
| 0.33 | 5.42 | 3.55 | 3.14 | |
| 1.98 | 10.89 | 1.18 | 3.93 | |
| 0.38 | 8.37 | 4.72 | 1.79 | |
| 0.29 | 4.34 | 3.22 | 4.28 | |
| 0.16 | 7.00 | 9.22 | 1.42 | |
| 1.93 | 13.57 | 1.51 | 3.50 |
aAcetazolamide.
bTacrine.
The radical scavenging and metal reduction activity of synthesised compounds (1–8).
| Compounds | DPPH | ABTS | Fe3+ reducing ability | Cu2+ reducing ability |
|---|---|---|---|---|
| 18.7 ± 1.5 | 18.4 ± 2.0 | 0.15 ± 0.03 | 0.22 ± 0.02 | |
| 8.2 ± 0.4 | 15.1 ± 1.4 | 0.27 ± 0.02 | 0.26 ± 0.04 | |
| 5.9 ± 0.4 | 7.3 ± 0.6 | 0.11 ± 0.01 | 0.28 ± 0.04 | |
| 12.7 ± 0.9 | 14.7 ± 0.9 | 0.33 ± 0.02 | 0.24 ± 0.05 | |
| 1.9 ± 0.09 | 76.8 ± 8.1 | 0.33 ± 0.03 | 0.99 ± 0.07 | |
| 9.2 ± 0.6 | 77.7 ± 7.9 | 0.47 ± 0.06 | 0.93 ± 0.07 | |
| 4.2 ± 0.4 | 74.5 ± 6.4 | 0.39 ± 0.04 | 1.15 ± 0.08 | |
| 3.2 ± 0.6 | 78.4 ± 7.7 | 0.33 ± 0.07 | 0.80 ± 0.05 | |
| BHT | 47.0 ± 5.2 | 98.9 ± 9.1 | 0.67 ± 0.01 | 2.00 ± 0.11 |
| BHA | 21.7 ± 1.9 | 79.5 ± 6.1 | 1.23 ± 0.20 | 2.28 ± 0.13 |
| Trolox | 57.8 ± 6.8 | 94.4 ± 9.0 | 1.27 ± 0.12 | 1.81 ± 0.05 |
Data are mean ± standard deviation (n = 3). BHA: butylated hydroxyanisole; BHT: butylated hydroxytoluene.
aThe percent (%) of ABTS and DPPH radical scavenging activity.
bThe values were expressed as absorbance. High absorbance indicates high metal ions (Fe3+ and Cu2+) reducing ability.
cStandard antioxidant.
ADMET–related parameters of the derivatives (1–8).
| Principal descriptors | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | Standard |
|---|---|---|---|---|---|---|---|---|---|
| QPlogPw | 13.47 | 13.46 | 13.47 | 13.46 | 14.84 | 14.83 | 14.83 | 14.82 | 4 to 45 |
| QPlogPo/w | 1.50 | 1.43 | 1.50 | 1.43 | 1.26 | 1.16 | 1.36 | 1.24 | −2.0 to 6.5 |
| QPlogS | −3.45 | −3.35 | −3.46 | −3.36 | −3.33 | −3.17 | −3.42 | −3.26 | −6.5 to 1.5 |
| QPlogKp | −3.38 | −3.39 | −3.39 | −3.40 | −3.43 | −3.44 | −3.42 | −3.43 | −8.0 to −1.0 |
| QPlogBB | −1.42 | −1.43 | −1.42 | −1.44 | −1.41 | −1.43 | −1.40 | −1.42 | −3.0 to 1.2 |
| QPlogKhsa | −0.36 | −0.38 | −0.36 | −0.38 | −0.39 | −0.40 | −0.39 | −0.40 | −1.5 to 1.5 |
| QPlogHERG | −5.63 | −5.60 | −5.64 | −5.61 | −5.56 | −5.53 | −5.55 | −5.52 | <−5 |
| HOA | 75.69 | 75.13 | 75.66 | 75.09 | 74.33 | 73.60 | 75.03 | 74.22 | <25 poor, great >500 |
| PSA | 95.15 | 95.19 | 95.20 | 95.23 | 98.30 | 98.31 | 97.98 | 98.06 | 7 to 200 |
| Rule of Five | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | max. 4 |
| Rule of Three | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | max. 3 |
Various computational pharmacodynamic and pharmacokinetic parameters of synthesised compounds in this research were predicted such as water/gas partition coefficient (QPlogPw), octanol/water partition coefficient (QPlogPo/w), aqueous solubility (QPlogS), skin permeability (QPlogKp), brain/blood partition coefficient (QPlogBB), prediction of binding to human serum albumin (QPlogKhsa), IC50 value for blockage of HERG K+ channels (QPlogHERG), human oral absorption (HOA), van der Waals surface area of polar nitrogen and oxygen atoms (PSA), number of violations of Lipinski’s rule of five and number of violations of Jorgensen’s rule of three.
Figure 1.Interaction of the ligands with the key amino acids within the active site of hCA I (PDB ID: 4WUP). (A) Docking pose of the native ligand 3UF (4-[(2-hydroxyethyl)sulfanyl]benzenesulfonamide, PubChem CID: 4269754). (B) Docking pose of compound 8 (4-((3-chloro-2-hydroxybenzyl)amino)benzenesulfonamide).
Figure 2.Interaction of the ligands with the key amino acids within the active site of hCA II (PDB ID: 4HT0). (A) Docking pose of the native ligand V50 (4-[(4,6-dimethylpyrimidin-2-yl)thio]-2,3,5,6-tetrafluorobenzenesulfonamide, PubChem CID: 71299336). (B) Docking pose of compound 7 (4-((3-bromo-2-hydroxybenzyl)amino)benzenesulfonamide).
Figure 3.Interaction of the ligands with the key amino acids within the active site of AChE (PDB ID: 4EY7). (A) Docking pose of the native ligand E20 (1-benzyl-4-[(5,6-dimethoxy-1-indanon-2-yl)methyl]piperidine, PubChem CID: 1150567). (B) Docking pose of compound 2 (3-((3-chloro-2-hydroxybenzylidene)amino)benzenesulfonamide).