Literature DB >> 32217482

A Comprehensive Survey on Graph Neural Networks.

Zonghan Wu, Shirui Pan, Fengwen Chen, Guodong Long, Chengqi Zhang, Philip S Yu.   

Abstract

Deep learning has revolutionized many machine learning tasks in recent years, ranging from image classification and video processing to speech recognition and natural language understanding. The data in these tasks are typically represented in the Euclidean space. However, there is an increasing number of applications, where data are generated from non-Euclidean domains and are represented as graphs with complex relationships and interdependency between objects. The complexity of graph data has imposed significant challenges on the existing machine learning algorithms. Recently, many studies on extending deep learning approaches for graph data have emerged. In this article, we provide a comprehensive overview of graph neural networks (GNNs) in data mining and machine learning fields. We propose a new taxonomy to divide the state-of-the-art GNNs into four categories, namely, recurrent GNNs, convolutional GNNs, graph autoencoders, and spatial-temporal GNNs. We further discuss the applications of GNNs across various domains and summarize the open-source codes, benchmark data sets, and model evaluation of GNNs. Finally, we propose potential research directions in this rapidly growing field.

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Year:  2021        PMID: 32217482     DOI: 10.1109/TNNLS.2020.2978386

Source DB:  PubMed          Journal:  IEEE Trans Neural Netw Learn Syst        ISSN: 2162-237X            Impact factor:   10.451


  122 in total

1.  Interpretation of Brain Morphology in Association to Alzheimer's Disease Dementia Classification Using Graph Convolutional Networks on Triangulated Meshes.

Authors:  Emanuel Azcona; Pierre Besson; Yunan Wu; Arjun Punjabi; Adam Martersteck; Amil Dravid; Todd B Parrish; S Kathleen Bandt; Aggelos K Katsaggelos
Journal:  Shape Med Imaging (2020)       Date:  2020-10-03

Review 2.  Multimodal deep learning for biomedical data fusion: a review.

Authors:  Sören Richard Stahlschmidt; Benjamin Ulfenborg; Jane Synnergren
Journal:  Brief Bioinform       Date:  2022-03-10       Impact factor: 11.622

3.  Accurate Physical Property Predictions via Deep Learning.

Authors:  Yuanyuan Hou; Shiyu Wang; Bing Bai; H C Stephen Chan; Shuguang Yuan
Journal:  Molecules       Date:  2022-03-03       Impact factor: 4.411

4.  Outcome Prediction from Behaviour Change Intervention Evaluations using a Combination of Node and Word Embedding.

Authors:  Debasis Ganguly; Martin Gleize; Yufang Hou; Charles Jochim; Francesca Bonin; Alessandra Pascale; Pierpaolo Tommasi; Pol Mac Aonghusa; Robert West; Marie Johnston; Mike Kelly; Susan Michie
Journal:  AMIA Annu Symp Proc       Date:  2022-02-21

5.  A Graph Convolutional Network-Based Deep Reinforcement Learning Approach for Resource Allocation in a Cognitive Radio Network.

Authors:  Di Zhao; Hao Qin; Bin Song; Beichen Han; Xiaojiang Du; Mohsen Guizani
Journal:  Sensors (Basel)       Date:  2020-09-13       Impact factor: 3.576

6.  Utilizing graph machine learning within drug discovery and development.

Authors:  Thomas Gaudelet; Ben Day; Arian R Jamasb; Jyothish Soman; Cristian Regep; Gertrude Liu; Jeremy B R Hayter; Richard Vickers; Charles Roberts; Jian Tang; David Roblin; Tom L Blundell; Michael M Bronstein; Jake P Taylor-King
Journal:  Brief Bioinform       Date:  2021-11-05       Impact factor: 11.622

Review 7.  Deep learning powers cancer diagnosis in digital pathology.

Authors:  Yunjie He; Hong Zhao; Stephen T C Wong
Journal:  Comput Med Imaging Graph       Date:  2020-12-11       Impact factor: 4.790

8.  MedGCN: Medication recommendation and lab test imputation via graph convolutional networks.

Authors:  Chengsheng Mao; Liang Yao; Yuan Luo
Journal:  J Biomed Inform       Date:  2022-01-29       Impact factor: 6.317

9.  Sex Differences of Cerebellum and Cerebrum: Evidence from Graph Convolutional Network.

Authors:  Yang Gao; Yan Tang; Hao Zhang; Yuan Yang; Tingting Dong; Qiaolan Jia
Journal:  Interdiscip Sci       Date:  2022-02-01       Impact factor: 2.233

10.  Combining graph neural networks and spatio-temporal disease models to improve the prediction of weekly COVID-19 cases in Germany.

Authors:  Cornelius Fritz; Emilio Dorigatti; David Rügamer
Journal:  Sci Rep       Date:  2022-03-10       Impact factor: 4.379

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