| Literature DB >> 32216101 |
Gang Peng1,2, Yishuo Tang1, Neeru Gandotra1, Gregory M Enns3, Tina M Cowan4, Hongyu Zhao1,2, Curt Scharfe1.
Abstract
Newborn screening (NBS) programmes utilise information on a variety of clinical variables such as gestational age, sex, and birth weight to reduce false-positive screens for inborn metabolic disorders. Here we study the influence of ethnicity on metabolic marker levels in a diverse newborn population. NBS data from screen-negative singleton babies (n = 100 000) were analysed, which included blood metabolic markers measured by tandem mass spectrometry and ethnicity status reported by the parents. Metabolic marker levels were compared between major ethnic groups (Asian, Black, Hispanic, White) using effect size analysis, which controlled for group size differences and influence from clinical variables. Marker level differences found between ethnic groups were correlated to NBS data from 2532 false-positive cases for four metabolic diseases: glutaric acidemia type 1 (GA-1), methylmalonic acidemia (MMA), ornithine transcarbamylase deficiency (OTCD), and very long-chain acyl-CoA dehydrogenase deficiency (VLCADD). In the result, 79% of the metabolic markers (34 of 43) had ethnicity-related differences. Compared to the other groups, Black infants had elevated GA-1 markers (C5DC, Cohen's d = .37, P < .001), Hispanics had elevated MMA markers (C3, Cohen's d = .13, P < .001, and C3/C2, Cohen's d = .27, P < .001); and Whites had elevated VLCADD markers (C14, Cohen's d = .28, P < .001, and C14:1, Cohen's d = .22, P < .001) and decreased OTCD markers (citrulline, Cohen's d = -.26, P < .001). These findings correlated with the higher false-positive rates in Black infants for GA-1, in Hispanics for MMA, and in Whites for OTCD and for VLCADD. Web-based tools are available to analyse ethnicity-related changes in newborn metabolism and to support developing methods to identify false-positives in metabolic screening.Entities:
Keywords: inborn metabolic disorders; informatics and statistics; newborn screening; paediatric clinical chemistry; racial/ethnic-disparities
Year: 2020 PMID: 32216101 PMCID: PMC7540352 DOI: 10.1002/jimd.12236
Source DB: PubMed Journal: J Inherit Metab Dis ISSN: 0141-8955 Impact factor: 4.982
Participant and sub‐group demographics
| Screen‐negative infants (%) | Screen‐positive infants (%) | |
|---|---|---|
| Variable | (n = 100 000) | (n = 2767) |
| Gestational age (wk) | ||
| >42 | 25 (0.03) | 40 (1.4) |
| 42 | 472 (0.5) | 50 (1.8) |
| 41 | 7649 (7.6) | 161 (5.8) |
| 39‐40 | 62 440 (62.4) | 890 (32.1) |
| 37‐38 | 23 813 (23.8) | 890 (32.1) |
| 28‐36 | 5553 (5.6) | 648 (23.4) |
| <28 | 73 (0.07) | 88 (3.2) |
| Birth weight (g) | ||
| >5000 | 124 (0.1) | 6 (0.2) |
| 4001‐5000 | 8246 (8.2) | 179 (6.5) |
| 3501‐4000 | 28 406 (28.4) | 507 (18.3) |
| 3001‐3500 | 41 497 (41.5) | 795 (28.7) |
| 2500‐3000 | 17 537 (17.5) | 673 (24.3) |
| 1000‐2499 | 4101 (4.1) | 507 (18.3) |
| <1000 | 89 (0.09) | 100 (3.6) |
| Sex | ||
| Male | 51 625 (51.6) | 1651 (59.7) |
| Female | 48 071 (48.1) | 1105 (39.9) |
| Unknown | 304 (0.3) | 11 (0.4) |
| Race/ethnicity | ||
| Asian | 14 320 (14.3) | 272 (9.8) |
| Black | 6668 (6.7) | 302 (10.9) |
| Hispanic | 49 627 (49.6) | 1164 (42.1) |
| White | 26 481 (26.5) | 941 (34.0) |
| Other/unknown | 2904 (2.9) | 88 (3.2) |
| Age at collection (h) | ||
| <12 | 48 (0.05) | 13 (0.5) |
| 12‐24 | 21 598 (21.6) | 466 (16.8) |
| 24‐48 | 71 562 (71.6) | 1631 (58.9) |
| 49‐168 | 6625 (6.6) | 615 (22.2) |
| >168 | 167 (0.2) | 42 (1.5) |
| TPN | ||
| No | 97 646 (97.6) | 2263 (81.8) |
| Yes | 1068 (1.1) | 392 (14.2) |
| Unknown | 1286 (1.3) | 112 (4.0) |
Abbreviation: TPN, total parenteral nutrition.
Screen‐negative (n = 463) and screen‐positive (n = 188) infants recorded outside of the indicated ranges were removed from analysis.
FIGURE 1Newborn birth weight (BW), gestational age (GA), and race/ethnicity. A, Distribution of BW for all infants (n = 99 537) and sub‐groups defined by GA. Symbols indicate the mean of BW in each of four race/ethnicity groups. Male‐to‐female BW differences remained significant as BW increased with GA in the growth curve (Table S3). B, The study cohort (n = 70 008) was divided into 25 groups defined by BW and GA. Only infants without total parenteral nutrition and age at blood collection AaC between 24 and 48 hours were included. The colour code indicates median of marker level for each group (C3 in this example) with group size in parenthesis. The central 3 × 3 area indicates the study cohort selected to identify ethnicity‐related marker level differences while controlling for the influence of GA and BW on marker levels. Race/ethnicity information was available for 58 056 infants born at term with a normal BW. Marker plots are available at https://RUSPtools.shinyapps.io/MetaDB
Correlation of marker levels between screen‐negatives and false‐positives
| Disease | NBS marker | Race/ethnicity | Gestational age | Birth weight | Sex | ||||
|---|---|---|---|---|---|---|---|---|---|
| (FP) | SN | FP | SN | FP | SN | FP | SN | FP | |
| n = 58 056 | No. (%) | n = 70 008 | No. (%) | n = 44 365 | (g) | n = 44 245 | No. (%) | ||
|
GA‐1 n = 1344 | ↑C5DC | ↑Black |
B: 100 (19.9) ( | — |
PT: 139 (17.9) ( | — |
FP: 3363 (n = 299) SN: 3443 ( | — |
M: 179 (59.9) ( |
|
MMA n = 502 | ↑C3 | ↑Hispanic |
H: 69 (71.9) ( | ↑PT |
PT: 29 (19.3) ( | ↑BW |
FP: 3539 (n = 54) SN: 3443 ( | — |
M: 23 (42.6) ( |
| ↑C3/C2 | ↑Hispanic | ↑PT | ↑BW | — | |||||
|
OTCD n = 496 | ↓CIT | ↓White |
W: 46 (37.1) ( | ↓PT |
PT: 58 (27.2) ( | — |
FP: 3398 (n = 59) SN: 3443 ( | — |
M: 39 (66.1) ( |
|
VLCADD n = 200 | ↑C14 | ↑White |
W: 40 (43.0) ( | ↑PT |
PT: 36 (19.7) ( | ↓BW |
FP: 3209 (n = 61) SN: 3443 ( | ↑Male |
M: 37 (60.7) ( |
| ↑C14:1 | ↑White | ↑PT | — | — | |||||
Abbreviations: B, Black; BW, birth weight; FP, false‐positive infants; GA, gestational age; H, Hispanic; M, male; PT, preterm birth; SN, screen‐negative controls; TPN, total parenteral nutrition; W, white. P values less than .05 are shaded grey. Only data without TPN and AaC of 24 to 48 hours were analysed.
Percentage of race/ethnicity groups in SN controls used in binomial testing was based on Table 1. GA was controlled from 37 to 41 weeks. BW was controlled from 2500 to 4000 g.
Elevated marker levels were associated with preterm birth (↑PT). Preterm birth rate of 8.3% in the general California population in 2014 was used in binomial testing.
Elevated marker levels were associated with high (↑BW) and with low (↓BW) birth weight. BW between FP and SN infants was compared using a t test. GA was controlled to 39 to 40 weeks.
SN male percentage of 50.9% was used in binomial testing. GA was controlled to 39 to 40 weeks.
FIGURE 2Newborn metabolic differences in race/ethnicity groups. A, To evaluate marker level differences between race/ethnicity groups, the group with the lowest mean marker level was defined as the reference group for each screening marker. Effect size differences for all markers between the four groups was ranked from top to bottom. 79% of the markers showed significant differences between race/ethnicity groups (Cohen's d ≥ .2), including 28 markers for 38 metabolic diseases on the RUSP (Table S5). Six markers (red label) are used to detect four metabolic disorders through elevated (GA‐1, MMA, VLCADD), or decreased (OTCD) marker levels. B, For each of the six markers, the distribution of marker levels (Log scale X‐axis) is shown for the two race/ethnicity groups with the largest Cohen's d difference. The coloured vertical lines correspond to the mean marker levels in the respective race/ethnicity group. The black dashed line indicates the screening cutoff value in the California NBS programme. Black infants had elevated C5DC, Hispanics had elevated C3 and C3/C2, and Whites had elevated C14 and C14:1, and decreased citrulline