Literature DB >> 32193223

The Evolutionary Origins of Recurrent Pancreatic Cancer.

Hitomi Sakamoto1, Marc A Attiyeh1, Jeffrey M Gerold2,3, Alvin P Makohon-Moore1,4, Akimasa Hayashi1, Jungeui Hong1, Rajya Kappagantula1,5, Lance Zhang1, Jerry P Melchor1, Johannes G Reiter6, Alexander Heyde2,3, Craig M Bielski7, Alexander V Penson4,8, Mithat Gönen8, Debyani Chakravarty7, Eileen M O'Reilly4,9, Laura D Wood10,11, Ralph H Hruban10,11, Martin A Nowak2,3, Nicholas D Socci12,13, Barry S Taylor4,7,8, Christine A Iacobuzio-Donahue14,5,13.   

Abstract

Surgery is the only curative option for stage I/II pancreatic cancer; nonetheless, most patients will experience a recurrence after surgery and die of their disease. To identify novel opportunities for management of recurrent pancreatic cancer, we performed whole-exome or targeted sequencing of 10 resected primary cancers and matched intrapancreatic recurrences or distant metastases. We identified that recurrent disease after adjuvant or first-line platinum therapy corresponds to an increased mutational burden. Recurrent disease is enriched for genetic alterations predicted to activate MAPK/ERK and PI3K-AKT signaling and develops from a monophyletic or polyphyletic origin. Treatment-induced genetic bottlenecks lead to a modified genetic landscape and subclonal heterogeneity for driver gene alterations in part due to intermetastatic seeding. In 1 patient what was believed to be recurrent disease was an independent (second) primary tumor. These findings suggest routine post-treatment sampling may have value in the management of recurrent pancreatic cancer. SIGNIFICANCE: The biological features or clinical vulnerabilities of recurrent pancreatic cancer after pancreaticoduodenectomy are unknown. Using whole-exome sequencing we find that recurrent disease has a distinct genomic landscape, intermetastatic genetic heterogeneity, diverse clonal origins, and higher mutational burden than found for treatment-naïve disease.See related commentary by Bednar and Pasca di Magliano, p. 762.This article is highlighted in the In This Issue feature, p. 747. ©2020 American Association for Cancer Research.

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Year:  2020        PMID: 32193223      PMCID: PMC7323937          DOI: 10.1158/2159-8290.CD-19-1508

Source DB:  PubMed          Journal:  Cancer Discov        ISSN: 2159-8274            Impact factor:   38.272


  49 in total

1.  Accumulation of driver and passenger mutations during tumor progression.

Authors:  Ivana Bozic; Tibor Antal; Hisashi Ohtsuki; Hannah Carter; Dewey Kim; Sining Chen; Rachel Karchin; Kenneth W Kinzler; Bert Vogelstein; Martin A Nowak
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-27       Impact factor: 11.205

2.  Intraductal Papillary Mucinous Neoplasms Arise From Multiple Independent Clones, Each With Distinct Mutations.

Authors:  Catherine G Fischer; Violeta Beleva Guthrie; Alicia M Braxton; Lily Zheng; Pei Wang; Qianqian Song; James F Griffin; Peter E Chianchiano; Waki Hosoda; Noushin Niknafs; Simeon Springer; Marco Dal Molin; David Masica; Robert B Scharpf; Elizabeth D Thompson; Jin He; Christopher L Wolfgang; Ralph H Hruban; Nicholas J Roberts; Anne Marie Lennon; Yuchen Jiao; Rachel Karchin; Laura D Wood
Journal:  Gastroenterology       Date:  2019-06-05       Impact factor: 22.682

3.  TRIP12 and UBR5 suppress spreading of chromatin ubiquitylation at damaged chromosomes.

Authors:  Thorkell Gudjonsson; Matthias Altmeyer; Velibor Savic; Luis Toledo; Christoffel Dinant; Merete Grøfte; Jirina Bartkova; Maria Poulsen; Yasuyoshi Oka; Simon Bekker-Jensen; Niels Mailand; Beate Neumann; Jean-Karim Heriche; Robert Shearer; Darren Saunders; Jiri Bartek; Jiri Lukas; Claudia Lukas
Journal:  Cell       Date:  2012-08-09       Impact factor: 41.582

4.  Evaluating Mismatch Repair Deficiency in Pancreatic Adenocarcinoma: Challenges and Recommendations.

Authors:  Zishuo I Hu; Jinru Shia; Zsofia K Stadler; Anna M Varghese; Marinela Capanu; Erin Salo-Mullen; Maeve A Lowery; Luis A Diaz; Diana Mandelker; Kenneth H Yu; Alice Zervoudakis; David P Kelsen; Christine A Iacobuzio-Donahue; David S Klimstra; Leonard B Saltz; Ibrahim H Sahin; Eileen M O'Reilly
Journal:  Clin Cancer Res       Date:  2018-01-24       Impact factor: 12.531

5.  Pak1 regulates multiple c-Kit mediated Ras-MAPK gain-in-function phenotypes in Nf1+/- mast cells.

Authors:  Andrew S McDaniel; Jayme D Allen; Su-Jung Park; Zahara M Jaffer; Elizabeth G Michels; Sarah J Burgin; Shi Chen; Waylan K Bessler; Clemens Hofmann; David A Ingram; Jonathan Chernoff; D Wade Clapp
Journal:  Blood       Date:  2008-09-02       Impact factor: 22.113

6.  Clonal status of actionable driver events and the timing of mutational processes in cancer evolution.

Authors:  Nicholas McGranahan; Francesco Favero; Elza C de Bruin; Nicolai Juul Birkbak; Zoltan Szallasi; Charles Swanton
Journal:  Sci Transl Med       Date:  2015-04-15       Impact factor: 17.956

7.  Association of Distinct Mutational Signatures With Correlates of Increased Immune Activity in Pancreatic Ductal Adenocarcinoma.

Authors:  Ashton A Connor; Robert E Denroche; Gun Ho Jang; Lee Timms; Sangeetha N Kalimuthu; Iris Selander; Treasa McPherson; Gavin W Wilson; Michelle A Chan-Seng-Yue; Ivan Borozan; Vincent Ferretti; Robert C Grant; Ilinca M Lungu; Eithne Costello; William Greenhalf; Daniel Palmer; Paula Ghaneh; John P Neoptolemos; Markus Buchler; Gloria Petersen; Sarah Thayer; Michael A Hollingsworth; Alana Sherker; Daniel Durocher; Neesha Dhani; David Hedley; Stefano Serra; Aaron Pollett; Michael H A Roehrl; Prashant Bavi; John M S Bartlett; Sean Cleary; Julie M Wilson; Ludmil B Alexandrov; Malcolm Moore; Bradly G Wouters; John D McPherson; Faiyaz Notta; Lincoln D Stein; Steven Gallinger
Journal:  JAMA Oncol       Date:  2017-06-01       Impact factor: 31.777

8.  A comprehensive survey of the mutagenic impact of common cancer cytotoxics.

Authors:  Bernadett Szikriszt; Ádám Póti; Orsolya Pipek; Marcin Krzystanek; Nnennaya Kanu; János Molnár; Dezső Ribli; Zoltán Szeltner; Gábor E Tusnády; István Csabai; Zoltan Szallasi; Charles Swanton; Dávid Szüts
Journal:  Genome Biol       Date:  2016-05-09       Impact factor: 13.583

9.  PRKCI promotes immune suppression in ovarian cancer.

Authors:  Sharmistha Sarkar; Christopher A Bristow; Prasenjit Dey; Kunal Rai; Ruth Perets; Alejandra Ramirez-Cardenas; Shruti Malasi; Emmet Huang-Hobbs; Monika Haemmerle; Sherry Y Wu; Michael McGuire; Alexei Protopopov; Shan Jiang; Joyce F Liu; Michelle S Hirsch; Qing Chang; Alexander J Lazar; Anil K Sood; Ronny Drapkin; Ronald DePinho; Giulio Draetta; Lynda Chin
Journal:  Genes Dev       Date:  2017-07-11       Impact factor: 11.361

10.  Integrated analysis of gene expression and copy number identified potential cancer driver genes with amplification-dependent overexpression in 1,454 solid tumors.

Authors:  Keiichi Ohshima; Keiichi Hatakeyama; Takeshi Nagashima; Yuko Watanabe; Kaori Kanto; Yuki Doi; Tomomi Ide; Yuji Shimoda; Tomoe Tanabe; Sumiko Ohnami; Shumpei Ohnami; Masakuni Serizawa; Koji Maruyama; Yasuto Akiyama; Kenichi Urakami; Masatoshi Kusuhara; Tohru Mochizuki; Ken Yamaguchi
Journal:  Sci Rep       Date:  2017-04-04       Impact factor: 4.379

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  29 in total

Review 1.  The pancreatic cancer genome revisited.

Authors:  Akimasa Hayashi; Jungeui Hong; Christine A Iacobuzio-Donahue
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2021-06-04       Impact factor: 46.802

2.  The genomic landscape of recurrent pancreatic cancer is modified by treatment.

Authors:  Irene Y Xie; Steven Gallinger
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2020-07       Impact factor: 46.802

3.  Identification of prognostic genes in the pancreatic adenocarcinoma immune microenvironment by integrated bioinformatics analysis.

Authors:  Haolan Wang; Liqing Lu; Xujun Liang; Yongheng Chen
Journal:  Cancer Immunol Immunother       Date:  2021-12-02       Impact factor: 6.968

Review 4.  Pancreatic cancer evolution and heterogeneity: integrating omics and clinical data.

Authors:  Ashton A Connor; Steven Gallinger
Journal:  Nat Rev Cancer       Date:  2021-11-17       Impact factor: 60.716

5.  Intact SMAD-4 is a predictor of increased locoregional recurrence in upfront resected pancreas cancer receiving adjuvant therapy.

Authors:  Hunter C Gits; Amy H Tang; William S Harmsen; William R Bamlet; Rondell P Graham; Gloria M Petersen; Thomas C Smyrk; Amit Mahipal; Roman O Kowalchuk; Jonathan B Ashman; William G Rule; Dawn Owen; Michelle A Neben Wittich; Robert R McWilliams; Thorvardur Halfdanarson; Wen Wee Ma; Terence T Sio; Sean P Cleary; Mark J Truty; Michael G Haddock; Christopher L Hallemeier; Kenneth W Merrell
Journal:  J Gastrointest Oncol       Date:  2021-10

6.  Determinants of anti-PD-1 response and resistance in clear cell renal cell carcinoma.

Authors:  Lewis Au; Emine Hatipoglu; Marc Robert de Massy; Kevin Litchfield; Gordon Beattie; Andrew Rowan; Desiree Schnidrig; Rachael Thompson; Fiona Byrne; Stuart Horswell; Nicos Fotiadis; Steve Hazell; David Nicol; Scott T C Shepherd; Annika Fendler; Robert Mason; Lyra Del Rosario; Kim Edmonds; Karla Lingard; Sarah Sarker; Mary Mangwende; Eleanor Carlyle; Jan Attig; Kroopa Joshi; Imran Uddin; Pablo D Becker; Mariana Werner Sunderland; Ayse Akarca; Ignazio Puccio; William W Yang; Tom Lund; Kim Dhillon; Marcos Duran Vasquez; Ehsan Ghorani; Hang Xu; Charlotte Spencer; José I López; Anna Green; Ula Mahadeva; Elaine Borg; Miriam Mitchison; David A Moore; Ian Proctor; Mary Falzon; Lisa Pickering; Andrew J S Furness; James L Reading; Roberto Salgado; Teresa Marafioti; Mariam Jamal-Hanjani; George Kassiotis; Benny Chain; James Larkin; Charles Swanton; Sergio A Quezada; Samra Turajlic
Journal:  Cancer Cell       Date:  2021-10-28       Impact factor: 31.743

7.  G-protein subunit gamma-4 expression has potential for detection, prediction and therapeutic targeting in liver metastasis of gastric cancer.

Authors:  Haruyoshi Tanaka; Mitsuro Kanda; Takashi Miwa; Shinichi Umeda; Koichi Sawaki; Chie Tanaka; Daisuke Kobayashi; Masamichi Hayashi; Suguru Yamada; Goro Nakayama; Masahiko Koike; Yasuhiro Kodera
Journal:  Br J Cancer       Date:  2021-04-14       Impact factor: 7.640

8.  Comparison of 4- and 4 plus-courses S-1 administration as adjuvant chemotherapy for pancreatic ductal adenocarcinoma.

Authors:  Bo Li; Shuo Shen; Siting You; Guoxiao Zhang; Suizhi Gao; Xiaohan Shi; Huan Wang; Xiaoyi Yin; Xiongfei Xu; Shiwei Guo; Gang Jin
Journal:  BMC Cancer       Date:  2021-05-26       Impact factor: 4.430

Review 9.  The genetics of ductal adenocarcinoma of the pancreas in the year 2020: dramatic progress, but far to go.

Authors:  Elizabeth D Thompson; Nicholas J Roberts; Laura D Wood; James R Eshleman; Michael G Goggins; Scott E Kern; Alison P Klein; Ralph H Hruban
Journal:  Mod Pathol       Date:  2020-07-23       Impact factor: 7.842

10.  Development and Validation of a Nomogram Based on Nutritional Indicators and Tumor Markers for Prognosis Prediction of Pancreatic Ductal Adenocarcinoma.

Authors:  Haoran Li; Fang Zhou; Zhifei Cao; Yuchen Tang; Yujie Huang; Ye Li; Bin Yi; Jian Yang; Peng Du; Dongming Zhu; Jian Zhou
Journal:  Front Oncol       Date:  2021-05-31       Impact factor: 6.244

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