Literature DB >> 32191862

Friction-Limited Folding of Disulfide-Reduced Monomeric SOD1.

Noah R Cohen1, Can Kayatekin2, Jill A Zitzewitz1, Osman Bilsel1, C R Matthews3.   

Abstract

The folding reaction of a stable monomeric variant of Cu/Zn superoxide dismutase (mSOD1), an enzyme responsible for the conversion of superoxide free radicals into hydrogen peroxide and oxygen, is known to be among the slowest folding processes that adhere to two-state behavior. The long lifetime, ∼10 s, of the unfolded state presents ample opportunities for the polypeptide chain to transiently sample nonnative structures before the formation of the productive folding transition state. We recently observed the formation of a nonnative structure in a peptide model of the C-terminus of SOD1, a sequence that might serve as a potential source of internal chain friction-limited folding. To test for friction-limited folding, we performed a comprehensive thermodynamic and kinetic analysis of the folding mechanism of mSOD1 in the presence of the viscogens glycerol and glucose. Using a, to our knowledge, novel analysis of the folding reactions, we found the disulfide-reduced form of the protein that exposes the C-terminal sequence, but not its disulfide-oxidized counterpart that protects it, experiences internal chain friction during folding. The sensitivity of the internal friction to the disulfide bond status suggests that one or both of the cross-linked regions play a critical role in driving the friction-limited folding. We speculate that the molecular mechanisms giving rise to the internal friction of disulfide-reduced mSOD1 might play a role in the amyotrophic lateral sclerosis-linked aggregation of SOD1. Published by Elsevier Inc.

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Year:  2020        PMID: 32191862      PMCID: PMC7175461          DOI: 10.1016/j.bpj.2020.02.028

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  54 in total

Review 1.  Protein folding as a diffusional process.

Authors:  M Jacob; F X Schmid
Journal:  Biochemistry       Date:  1999-10-19       Impact factor: 3.162

2.  Internal friction controls the speed of protein folding from a compact configuration.

Authors:  Suzette A Pabit; Heinrich Roder; Stephen J Hagen
Journal:  Biochemistry       Date:  2004-10-05       Impact factor: 3.162

3.  Intramolecular diffusion controls aggregation of the PAPf39 peptide.

Authors:  Kinshuk R Srivastava; Kinsley C French; Franco O Tzul; George I Makhatadze; Lisa J Lapidus
Journal:  Biophys Chem       Date:  2016-06-29       Impact factor: 2.352

4.  Diffusional barrier in the unfolding of a small protein.

Authors:  Lovy Pradeep; Jayant B Udgaonkar
Journal:  J Mol Biol       Date:  2006-12-01       Impact factor: 5.469

5.  Unfolding and folding internal friction of β-hairpins is smaller than that of α-helices.

Authors:  Julius C F Schulz; Markus S Miettinen; R R Netz
Journal:  J Phys Chem B       Date:  2015-03-18       Impact factor: 2.991

6.  Disulfide-reduced ALS variants of Cu, Zn superoxide dismutase exhibit increased populations of unfolded species.

Authors:  Can Kayatekin; Jill A Zitzewitz; C Robert Matthews
Journal:  J Mol Biol       Date:  2010-02-23       Impact factor: 5.469

7.  Mutation-dependent polymorphism of Cu,Zn-superoxide dismutase aggregates in the familial form of amyotrophic lateral sclerosis.

Authors:  Yoshiaki Furukawa; Kumi Kaneko; Koji Yamanaka; Nobuyuki Nukina
Journal:  J Biol Chem       Date:  2010-04-19       Impact factor: 5.157

8.  Folding of human superoxide dismutase: disulfide reduction prevents dimerization and produces marginally stable monomers.

Authors:  Mikael J Lindberg; Johanna Normark; Arne Holmgren; Mikael Oliveberg
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-02       Impact factor: 11.205

9.  Metal-free ALS variants of dimeric human Cu,Zn-superoxide dismutase have enhanced populations of monomeric species.

Authors:  Anna-Karin E Svensson; Osman Bilsel; Can Kayatekin; Jessica A Adefusika; Jill A Zitzewitz; C Robert Matthews
Journal:  PLoS One       Date:  2010-04-09       Impact factor: 3.240

Review 10.  Understanding protein aggregation from the view of monomer dynamics.

Authors:  Lisa J Lapidus
Journal:  Mol Biosyst       Date:  2012-10-26
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  2 in total

Review 1.  Prionoids in amyotrophic lateral sclerosis.

Authors:  Philippe Gosset; William Camu; Cedric Raoul; Alexandre Mezghrani
Journal:  Brain Commun       Date:  2022-06-09

Review 2.  Protein Aggregation in the Pathogenesis of Ischemic Stroke.

Authors:  Shusheng Wu; Longfei Du
Journal:  Cell Mol Neurobiol       Date:  2020-06-11       Impact factor: 5.046

  2 in total

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