Literature DB >> 10529221

Protein folding as a diffusional process.

M Jacob1, F X Schmid.   

Abstract

A protein chain must move relative to the solvent molecules and explore many conformations when it folds from the extended unfolded state to the compact native state. Experimental and theoretical approaches suggest that diffusional processes in fact contribute to the kinetics of protein folding. We describe here how variations of the solvent viscosity can be employed to uncover the diffusional contributions to a folding reaction and assess the use of transition state theory and Kramers' rate theory for the analysis of protein folding reactions.

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Year:  1999        PMID: 10529221     DOI: 10.1021/bi991503o

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  22 in total

1.  Cytochrome c folds through a smooth funnel.

Authors:  M Panda; M G Benavides-Garcia; M M Pierce; B T Nall
Journal:  Protein Sci       Date:  2000-03       Impact factor: 6.725

2.  Nonglassy kinetics in the folding of a simple single-domain protein.

Authors:  B Gillespie; K W Plaxco
Journal:  Proc Natl Acad Sci U S A       Date:  2000-10-24       Impact factor: 11.205

3.  Fast-folding protein kinetics, hidden intermediates, and the sequential stabilization model.

Authors:  S Banu Ozkan; Ken A Dill; Ivet Bahar
Journal:  Protein Sci       Date:  2002-08       Impact factor: 6.725

4.  Experimental evaluation of topological parameters determining protein-folding rates.

Authors:  Erik J Miller; Kael F Fischer; Susan Marqusee
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-29       Impact factor: 11.205

5.  Folding lambda-repressor at its speed limit.

Authors:  Wei Yuan Yang; Martin Gruebele
Journal:  Biophys J       Date:  2004-07       Impact factor: 4.033

6.  Pressure-jump-induced kinetics reveals a hydration dependent folding/unfolding mechanism of ribonuclease A.

Authors:  J Font; J Torrent; M Ribó; D V Laurents; C Balny; M Vilanova; R Lange
Journal:  Biophys J       Date:  2006-06-23       Impact factor: 4.033

Review 7.  Single-molecule fluorescence studies of protein folding and conformational dynamics.

Authors:  Xavier Michalet; Shimon Weiss; Marcus Jäger
Journal:  Chem Rev       Date:  2006-05       Impact factor: 60.622

8.  High viscosity and anisotropy characterize the cytoplasm of fungal dormant stress-resistant spores.

Authors:  J Dijksterhuis; J Nijsse; F A Hoekstra; E A Golovina
Journal:  Eukaryot Cell       Date:  2006-11-10

9.  Capture of monomeric refolding intermediate of human muscle creatine kinase.

Authors:  Sen Li; Ji-Hong Bai; Yong-Doo Park; Hai-Meng Zhou
Journal:  Protein Sci       Date:  2006-01       Impact factor: 6.725

10.  Trehalose-enzyme interactions result in structure stabilization and activity inhibition. The role of viscosity.

Authors:  José G Sampedro; Salvador Uribe
Journal:  Mol Cell Biochem       Date:  2004 Jan-Feb       Impact factor: 3.396

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