| Literature DB >> 32187815 |
Michael C Böck1, Georg Höfner1, Klaus T Wanner1.
Abstract
Potential mGAT4 inhibitors derived from the lead substance (S)-SNAP-5114 have been synthesized and characterized for their inhibitory potency. Variations from the parent compound included the substitution of one of its aromatic 4-methoxy and 4-methoxyphenyl groups, respectively, with a more polar moiety, including a carboxylic acid, alcohol, nitrile, carboxamide, sulfonamide, aldehyde or ketone function, or amino acid partial structures. Furthermore, it was investigated how the substitution of more than one of the aromatic 4-methoxy groups affects the potency and selectivity of the resulting compounds. Among the synthesized test substances (S)-1-{2-[(4-formylphenyl)bis(4-methoxyphenyl)-methoxy]ethyl}piperidine-3-carboxylic acid, that features a carbaldehyde function in place of one of the aromatic 4-methoxy moieties of (S)-SNAP-5114, was found to have a pIC50 value of 5.89±0.07, hence constituting a slightly more potent mGAT4 inhibitor than the parent substance while showing comparable subtype selectivity.Entities:
Keywords: GABA uptake inhibitors; mGAT4; medicinal chemistry; neurochemistry; structure-activity relationships
Mesh:
Substances:
Year: 2020 PMID: 32187815 PMCID: PMC7317212 DOI: 10.1002/cmdc.201900719
Source DB: PubMed Journal: ChemMedChem ISSN: 1860-7179 Impact factor: 3.466
Binding affinities (pK i) and inhibitory potencies (pIC50) of reference compounds 1–5 from the literature.
|
| ||||||
|---|---|---|---|---|---|---|
|
Entry |
Compound |
p |
pIC50 [b] | |||
|
mGAT1 |
mGAT1 |
mGAT2 |
mGAT3 |
mGAT4 | ||
|
1 |
Tiagabine [( |
7.43±0.11 |
6.88±0.12 |
50 % |
64 % |
73 % |
|
2 |
|
– |
4.08 |
– |
4.96 |
5.64±0.05 |
|
3 |
( |
4.56±0.02 |
4.07±0.09 |
56 % |
5.29±0.04 |
5.71±0.07 |
|
4 |
DDPM‐1457 [( |
4.33±0.06 |
4.40±0.05 |
4.42±0.11 |
5.47±0.02 |
5.87±0.08 |
|
5 |
DDPM‐859 [( |
– |
4.19±0.07 |
4.12±0.08 |
4.85±0.04 |
5.78±0.03 |
[a] Results of the MS Binding Assays are given as pK i±SEM. [b] Results of the [3H]GABA uptake assays are given as pIC50±SEM. Percent values represent remaining [3H]GABA uptake in presence of 100 μM compound. [c] Reference literature [25]. [d] Reference literature [26].
Scheme 1Overview of the structural modifications of (S)‐SNAP‐5114 conducted in this study.
Scheme 2Retrosynthetic analysis for the preparation of (S)‐SNAP‐5114 analogues
Synthesis of the trityl alcohols 2 a–i.
|
| ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
|
Entry |
Aryl halide |
Metal‐ation reagent |
Electrophile |
Product |
R1 |
R2 |
R3 |
Yield [%] | ||
|
1 |
|
|
|
|
|
|
−CH(OMe)2 |
−OMe |
−OMe |
99 |
|
2 |
|
|
|
|
|
|
|
−OMe |
−OMe |
87 |
|
3 |
|
|
|
|
|
|
−SO2NMe2 |
−OMe |
−OMe |
53 |
|
4 |
|
|
|
|
|
|
|
−OMe |
−OMe |
56 |
|
5 |
|
|
|
|
|
|
−COOEt |
−OMe |
−OMe |
77 |
|
6 |
|
|
Mg |
|
|
|
−CH2OMe |
−OMe |
−OMe |
92 |
|
7 |
|
|
Mg |
|
|
|
−CN |
−OMe |
−OMe |
94 |
|
8 |
|
|
Mg |
|
|
|
−CH2OMe |
−CH2OMe |
−OMe |
70 |
|
9 |
|
|
Mg |
|
|
|
−CH2OMe |
−CH2OMe |
−CH2OMe |
85 |
Reagents and conditions: [a] entry 1–3: t‐BuLi (2.0 eq), THF, −78 °C, 2 h, 4,4′‐dimethoxybenzophenone (1.0 eq), THF, −78 °C‐rt; entry 5: i‐PrMgCl (1.0 eq), THF, −20 °C, 1.5 h, 4,4′‐dimethoxybenzophenone (1.0 eq), THF, −20 °C‐rt; entry 6: n‐BuLi (1.0 eq), diethyl ether, −78 °C, 0.5 h, 4,4′‐dimethoxybenzophenone (0.83 eq), diethyl ether, −78 °C‐rt; entry 7: magnesium (1.0 eq), THF, rt, 4‐cyanobenzoylchloride, THF, 0 °C‐rt; entry 8: magnesium (1.0 eq), THF, rt, methyl 4‐methoxybenzoate (0.89 eq), THF, reflux; entry 9: magnesium (1.0 eq), THF, rt, dimethyl carbonate (0.33 eq), THF, reflux. [b] Synthesized by N‐alkylation of 4‐bromobenzenesulfonamide with dimethyl sulfate (2.0 eq) in presence of potassium carbonate (4.0 eq) and tetrabutylammonium tetrafluoroborate (10 mol%) under reflux conditions.
Synthesis of the N‐substituted nipecotic acid ethyl esters 12 a–k and their hydrolysis to the free nipecotic acid derivatives 5 b–k.
|
| ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
|
Entry |
Starting material |
R1 |
R2 |
R3 |
Product of step a+b |
R1 |
Yield [%][f] |
Product of step d |
R1 |
Yield [%] |
|
1 |
|
|
−OMe |
−OMe |
|
|
70 |
|
|
89 |
|
2 |
|
|
−OMe |
−OMe |
|
|
50 |
|
|
86 |
|
3 |
|
|
−OMe |
−OMe |
|
|
64 |
|
|
88 |
|
4 |
|
|
−OMe |
−OMe |
|
|
48 |
|
|
80 |
|
5 |
|
|
−OMe |
−OMe |
|
|
54 |
|
|
61 |
|
6 |
|
|
−OMe |
−OMe |
|
|
44 |
|
|
81 |
|
7 |
|
|
−OMe |
−OMe |
|
|
85 |
|
|
86 |
|
8 |
|
|
−CH2OMe |
−OMe |
|
|
46 |
|
|
94 |
|
9 |
|
|
−OMe |
−CH2OMe |
|
|
42 |
|
|
90 |
|
10 |
|
|
−OMe |
−OMe |
|
|
49 |
|
|
87 |
|
11 |
|
−COOMe |
−OMe |
−OMe |
|
−COOMe |
88 |
|
−COOH |
97 |
Reagents and conditions: [a] acetyl chloride, dimethyl formamide (cat.), rt; [b] HCl, THF/H2O, reflux; [c] 1‐(2‐hydroxyethyl)nipecotic acid ethyl ester (6) (1.1 eq), potassium carbonate (2.5 eq), acetonitrile, rt; [d] barium hydroxide octahydrate (2–4 eq), methanol/water 4 : 1; carbon dioxide; [e] ethyl nipecotinate (1.1 eq), potassium carbonate (2.5 eq), potassium iodide (0.1 eq), acetonitrile, microwave, 80 °C. [f] Yield over two steps.
syntesis of the target compounds 5 m–t with amino acid derived residues substituting one of the three methoxy groups in (S)‐SNAP‐5114.
|
| ||||||
|---|---|---|---|---|---|---|
|
Entry |
Product of step a |
R1 |
Yield [%] |
Product of step b |
R2 |
Yield [%] |
|
1 |
|
−OH |
89 |
|
−OH |
69 |
|
2 |
|
|
57 |
|
|
65 |
|
3 |
|
|
42 |
|
|
74 |
|
4 |
|
|
59 |
|
|
82 |
|
5 |
|
|
64 |
|
|
92 |
|
6 |
|
|
|
|
|
47[c] |
|
7 |
|
|
40 |
|
|
84 |
|
8 |
|
|
25 |
|
|
96 |
Reagents and conditions: [a] entry 1: sodium borohydride (2.5 eq), methanol, rt; entry 2–5: sodium triacetoxyborohydride (1.4 eq), amino acid ethyl ester hydrochloride (2.0 eq), dichloromethane, rt; entry 7–8: sodium cyanoborohydride (1.4 eq), free amino acid (2.0 eq), methanol, rt. [b] barium hydroxide octahydrate (2–4 eq), methanol/water 4 : 1; carbon dioxide. [c] Yield over two steps.
Binding affinities (pK i) and inhibitory potencies (pIC50) of the N‐substituted nipecotic acids 6 a, c–u and nipecotic acid ethyl esters 12 a, c–r, t–u.
|
| |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
Entry |
Compound |
R1 |
R2 |
R3 |
R4 |
X |
p |
pIC50 [b] | |||
|
mGAT1 |
mGAT2 |
mGAT3 |
mGAT4 | ||||||||
|
1 |
|
|
OMe |
OMe |
OEt |
O |
85.4 % |
55.5 % |
4.57 |
4.90 |
55.9 % |
|
2 |
|
OMe |
OMe |
OH |
O |
4.41±0.11 |
4.17±0.08 |
66.3 % |
4.98±0.08 |
5.77±0.04 | |
|
3 |
|
OMe |
OMe |
OH |
O |
77.4 % |
4.14±0.00 |
72.6 % |
5.16±0.05 |
5.89±0.07 | |
|
4 |
|
OMe |
Ome |
OH |
O |
4.91±0.09 |
4.45±0.08 |
50.1 % |
4.47±0.05 |
4.86±0.03 | |
|
5 |
|
|
OMe |
OMe |
OEt |
O |
84.6 % |
72.9 % |
66.4 % |
55.2 % |
84.2 % |
|
6 |
|
OMe |
OMe |
OH |
O |
4.51±0.03 |
64.6 % |
64.2 % |
4.24±0.02 |
5.43±0.04 | |
|
7 |
|
|
OMe |
OMe |
OEt |
O |
93.8 % |
75.7 % |
73.2 % |
95.9 % |
94.3 % |
|
8 |
|
OMe |
OMe |
OH |
O |
62.1 % |
67.9 % |
78.0 % |
77.1 % |
82.0 % | |
|
9 |
|
|
OMe |
OMe |
OEt |
O |
77.2 % |
4.39 |
4.88 |
4.71 |
4.24 |
|
10 |
|
OMe |
OMe |
OH |
O |
4.03 |
84.9 % |
72.9 % |
81.8 % |
4.58 | |
|
11 |
|
|
OMe |
OMe |
OEt |
O |
74.8 % |
84.6 % |
87.3 % |
79.0 % |
76.1 % |
|
12 |
|
|
OMe |
OMe |
OH |
O |
71.4 % |
96.5 % |
85.2 % |
4.24 |
4.86 |
|
13 |
|
|
OMe |
OMe |
OEt |
O |
55.3 % |
66.6 % |
58.8 % |
56.9 % |
50.8 % |
|
14 |
|
OMe |
OMe |
OH |
O |
89.4 % |
67.1 % |
72.7 % |
4.51±0.08 |
5.42±0.10 | |
|
15 |
|
|
OMe |
OMe |
OEt |
O |
97.6 % |
76.6 % |
80.7 % |
63.6 % |
71.9 % |
|
16 |
|
OMe |
OMe |
OH |
O |
4.40±0.10 |
74.8 % |
82.9 % |
4.31±0.12 |
5.07±0.12 | |
|
17 |
|
|
CH2OMe |
OMe |
OEt |
O |
72.9 % |
64.9 % |
4.30 |
50.6 % |
4.05 |
|
18 |
|
CH2OMe |
OMe |
OH |
O |
74.1 % |
70.5 % |
55.2 % |
52.2 % |
4.77 | |
|
19 |
|
CH2OMe |
CH2OMe |
OEt |
O |
87.5 % |
70.3 % |
65.0 % |
4.02 |
51.4 % | |
|
20 |
|
CH2OMe |
CH2OMe |
OH |
O |
92.7 % |
90.7 % |
72.6 % |
68.3 % |
76.1 % | |
|
21 |
|
|
OMe |
OMe |
OEt |
O |
89.3 % |
57.8 % |
56.1 % |
4.10 |
60.0 % |
|
22 |
|
OMe |
OMe |
OH |
O |
87.0 % |
79.6 % |
96.1 % |
82.1 % |
65.2 % | |
|
23 |
|
−COOMe |
OMe |
OMe |
OEt |
O |
90.8 % |
89.1 % |
92.6 % |
64.1 % |
78.2 % |
|
24 |
|
−COOH |
OMe |
OMe |
OH |
O |
96.9 % |
100 % |
101 % |
94.0 % |
96.5 % |
|
25 |
|
−OH |
OMe |
OMe |
OEt |
CH 2 |
104.0 % |
79.3 % |
70.4 % |
65.0 % |
73.8 % |
|
26 |
|
−OH |
OMe |
OMe |
OH |
CH 2 |
4.49 |
69.5 % |
62.5 % |
80.7 % |
92.0 % |
|
27 |
|
|
OMe |
OMe |
OEt |
O |
75.3 % |
50.4 % |
49.3 % |
4.45 |
4.23 |
|
28 |
|
OMe |
OMe |
OH |
O |
55.0 % |
78.1 % |
91.6 % |
58.7 % |
4.90 | |
|
29 |
|
|
OMe |
OMe |
OEt |
O |
91.7 % |
51.8 % |
4.29 |
4.47 |
4.18 |
|
30 |
|
|
OMe |
OMe |
OH |
O |
86.2 % |
81.8 % |
96.1 % |
90.9 % |
72.2 % |
|
31 |
|
|
OMe |
OMe |
OEt |
O |
72.4 % |
4.59 |
4.72 |
4.63 |
4.66 |
|
32 |
|
|
OMe |
OMe |
OH |
O |
82.3 % |
94.4 % |
69.5 % |
89.1 % |
56.3 % |
|
33 |
|
|
OMe |
OMe |
OEt |
O |
95.8 % |
75.5 % |
103 % |
58.8 % |
66.1 % |
|
34 |
|
|
OMe |
OMe |
OH |
O |
58.8 % |
78.2 % |
76.0 % |
69.1 % |
4.88 |
|
35 |
|
|
OMe |
OMe |
OEt |
O |
90.9 % |
66.9 % |
67.4 % |
49.3 % |
57.4 % |
|
36 |
|
|
OMe |
OMe |
OH |
O |
77.0 % |
80.7 % |
77.0 % |
61.1 % |
4.34 |
|
37 |
|
|
OMe |
OMe |
OH |
O |
97.0 % |
76.0 % |
79.7 % |
64.2 % |
4.19 |
|
38 |
|
|
OMe |
OMe |
OEt |
O |
84.9 % |
52.4 % |
76.7 % |
59.3 % |
67.6 % |
|
39 |
|
OMe |
OMe |
OH |
O |
86.5 % |
48.5 % |
51.5 % |
4.33 |
4.13 | |
|
40 |
|
|
OMe |
OMe |
OEt |
O |
101.6 % |
52.3 % |
73.5 % |
49.7 % |
63.9 % |
|
41 |
|
OMe |
OMe |
OH |
O |
54.1 % |
99,5 % |
4,18 |
96,0 % |
50,0 % | |
[a] Results of the MS Binding Assays are given as pK i±SEM. For compounds with low pK i values only one measurement was performed, therefore no SEM can be reported. Percent values represent remaining specific NO711 binding in presence of 100 μM compound. [b] Results of the [3H]GABA uptake assays are given as pIC50±SEM. For compounds with low pIC50 values only one measurement was performed, therefore no SEM can be reported. Percent values represent remaining [3H]GABA uptake in presence of 100 μM compound.