Literature DB >> 32161209

Genetic basis of myelodysplastic syndromes.

Seishi Ogawa1.   

Abstract

During the past decade, substantial progress has been made in the field of the genetics of myelodysplastic syndromes (MDS). These comprise a group of chronic myeloid neoplasms with abnormal cell morphology and progression to acute myeloid leukemia (AML), where revolutionary sequencing technologies have played a major role. Through extensive sequencing of a large number of MDS genomes, a comprehensive registry of driver mutations involved in the pathogenesis of MDS has been revealed, along with their impacts on clinical phenotype and prognosis. The most frequently affected molecules are involved in DNA methylations, chromatin modification, RNA splicing, transcription, signal transduction, cohesin regulation, and DNA repair. These mutations show strong positive and negative correlations with each other, suggesting the presence of functional interactions between mutations, which dictate disease progression. Because these mutations are associated with disease phenotype, drug response, and clinical outcomes, it is essential to be familiar with MDS genetics not only for better understanding of MDS pathogenesis but also for management of patients.

Entities:  

Keywords:  cohesin; myelodysplastic syndromes (MDS); next-generation sequencing; secondary acute myeloid leukemia (sAML); splicing factors

Mesh:

Substances:

Year:  2020        PMID: 32161209      PMCID: PMC7167367          DOI: 10.2183/pjab.96.009

Source DB:  PubMed          Journal:  Proc Jpn Acad Ser B Phys Biol Sci        ISSN: 0386-2208            Impact factor:   3.493


  68 in total

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Authors:  Seth J Corey; Mark D Minden; Dwayne L Barber; Hagop Kantarjian; Jean C Y Wang; Aaron D Schimmer
Journal:  Nat Rev Cancer       Date:  2007-02       Impact factor: 60.716

2.  Novel CUX1 missense mutation in association with 7q- at leukemic transformation of MPN.

Authors:  Nils H Thoennissen; Terra Lasho; Gabriela B Thoennissen; Seishi Ogawa; Ayalew Tefferi; H Phillip Koeffler
Journal:  Am J Hematol       Date:  2011-06-14       Impact factor: 10.047

3.  The origin and evolution of mutations in acute myeloid leukemia.

Authors:  John S Welch; Timothy J Ley; Daniel C Link; Christopher A Miller; David E Larson; Daniel C Koboldt; Lukas D Wartman; Tamara L Lamprecht; Fulu Liu; Jun Xia; Cyriac Kandoth; Robert S Fulton; Michael D McLellan; David J Dooling; John W Wallis; Ken Chen; Christopher C Harris; Heather K Schmidt; Joelle M Kalicki-Veizer; Charles Lu; Qunyuan Zhang; Ling Lin; Michelle D O'Laughlin; Joshua F McMichael; Kim D Delehaunty; Lucinda A Fulton; Vincent J Magrini; Sean D McGrath; Ryan T Demeter; Tammi L Vickery; Jasreet Hundal; Lisa L Cook; Gary W Swift; Jerry P Reed; Patricia A Alldredge; Todd N Wylie; Jason R Walker; Mark A Watson; Sharon E Heath; William D Shannon; Nobish Varghese; Rakesh Nagarajan; Jacqueline E Payton; Jack D Baty; Shashikant Kulkarni; Jeffery M Klco; Michael H Tomasson; Peter Westervelt; Matthew J Walter; Timothy A Graubert; John F DiPersio; Li Ding; Elaine R Mardis; Richard K Wilson
Journal:  Cell       Date:  2012-07-20       Impact factor: 41.582

4.  Clinical effect of point mutations in myelodysplastic syndromes.

Authors:  Rafael Bejar; Kristen Stevenson; Omar Abdel-Wahab; Naomi Galili; Björn Nilsson; Guillermo Garcia-Manero; Hagop Kantarjian; Azra Raza; Ross L Levine; Donna Neuberg; Benjamin L Ebert
Journal:  N Engl J Med       Date:  2011-06-30       Impact factor: 91.245

5.  Efficacy of lenalidomide in myelodysplastic syndromes.

Authors:  Alan List; Sandy Kurtin; Denise J Roe; Andrew Buresh; Daruka Mahadevan; Deborah Fuchs; Lisa Rimsza; Ruth Heaton; Robert Knight; Jerome B Zeldis
Journal:  N Engl J Med       Date:  2005-02-10       Impact factor: 91.245

6.  Mechanisms for U2AF to define 3' splice sites and regulate alternative splicing in the human genome.

Authors:  Changwei Shao; Bo Yang; Tongbin Wu; Jie Huang; Peng Tang; Yu Zhou; Jie Zhou; Jinsong Qiu; Li Jiang; Hairi Li; Geng Chen; Hui Sun; Yi Zhang; Alain Denise; Dong-Er Zhang; Xiang-Dong Fu
Journal:  Nat Struct Mol Biol       Date:  2014-10-19       Impact factor: 15.369

7.  Efficacy of azacitidine compared with that of conventional care regimens in the treatment of higher-risk myelodysplastic syndromes: a randomised, open-label, phase III study.

Authors:  Pierre Fenaux; Ghulam J Mufti; Eva Hellstrom-Lindberg; Valeria Santini; Carlo Finelli; Aristoteles Giagounidis; Robert Schoch; Norbert Gattermann; Guillermo Sanz; Alan List; Steven D Gore; John F Seymour; John M Bennett; John Byrd; Jay Backstrom; Linda Zimmerman; David McKenzie; Cl Beach; Lewis R Silverman
Journal:  Lancet Oncol       Date:  2009-02-21       Impact factor: 41.316

8.  Architectural protein subclasses shape 3D organization of genomes during lineage commitment.

Authors:  Jennifer E Phillips-Cremins; Michael E G Sauria; Amartya Sanyal; Tatiana I Gerasimova; Bryan R Lajoie; Joshua S K Bell; Chin-Tong Ong; Tracy A Hookway; Changying Guo; Yuhua Sun; Michael J Bland; William Wagstaff; Stephen Dalton; Todd C McDevitt; Ranjan Sen; Job Dekker; James Taylor; Victor G Corces
Journal:  Cell       Date:  2013-05-23       Impact factor: 41.582

9.  A point mutation at codon 13 of the N-ras oncogene in myelodysplastic syndrome.

Authors:  H Hirai; Y Kobayashi; H Mano; K Hagiwara; Y Maru; M Omine; H Mizoguchi; J Nishida; F Takaku
Journal:  Nature       Date:  1987 Jun 4-10       Impact factor: 49.962

10.  Novel recurrent mutations in the RAS-like GTP-binding gene RIT1 in myeloid malignancies.

Authors:  I Gómez-Seguí; H Makishima; A Jerez; K Yoshida; B Przychodzen; S Miyano; Y Shiraishi; H D Husseinzadeh; K Guinta; M Clemente; N Hosono; M A McDevitt; A R Moliterno; M A Sekeres; S Ogawa; J P Maciejewski
Journal:  Leukemia       Date:  2013-06-14       Impact factor: 11.528

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  3 in total

1.  Global Proteomics Analysis of Bone Marrow: Establishing Talin-1 and Centrosomal Protein of 55 kDa as Potential Molecular Signatures for Myelodysplastic Syndromes.

Authors:  Arlindo A Moura; Maria Julia B Bezerra; Aline M A Martins; Daniela P Borges; Roberta T G Oliveira; Raphaela M Oliveira; Kaio M Farias; Arabela G Viana; Guilherme G C Carvalho; Carlos R K Paier; Marcelo V Sousa; Wagner Fontes; Carlos A O Ricart; Maria Elisabete A Moraes; Silvia M M Magalhães; Cristiana L M Furtado; Manoel O Moraes-Filho; Claudia Pessoa; Ronald F Pinheiro
Journal:  Front Oncol       Date:  2022-06-22       Impact factor: 5.738

2.  Epigenetic traits inscribed in chromatin accessibility in aged hematopoietic stem cells.

Authors:  Naoki Itokawa; Motohiko Oshima; Shuhei Koide; Naoya Takayama; Wakako Kuribayashi; Yaeko Nakajima-Takagi; Kazumasa Aoyama; Satoshi Yamazaki; Kiyoshi Yamaguchi; Yoichi Furukawa; Koji Eto; Atsushi Iwama
Journal:  Nat Commun       Date:  2022-05-16       Impact factor: 17.694

3.  A machine learning model of response to hypomethylating agents in myelodysplastic syndromes.

Authors:  Nathan Radakovich; David A Sallman; Rena Buckstein; Andrew Brunner; Amy Dezern; Sudipto Mukerjee; Rami Komrokji; Najla Al-Ali; Jacob Shreve; Yazan Rouphail; Anne Parmentier; Alexandre Mamedov; Mohammed Siddiqui; Yihong Guan; Teodora Kuzmanovic; Metis Hasipek; Babal Jha; Jaroslaw P Maciejewski; Mikkael A Sekeres; Aziz Nazha
Journal:  iScience       Date:  2022-08-12
  3 in total

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