| Literature DB >> 32126890 |
Sophie E Ter Hark1, Stéphane Jamain2,3,4, Dick Schijven1, Bochao D Lin1, Mark K Bakker1, Anne Boland-Auge5, Jean-François Deleuze5, Réjane Troudet2,3,4, Anil K Malhotra6, Sinan Gülöksüz7,8, Christiaan H Vinkers9,10, Bjørn H Ebdrup11,12, René S Kahn13,14, Marion Leboyer2,3,4,15, Jurjen J Luykx1,13,16.
Abstract
BACKGROUND: Antipsychotic-induced weight gain is a common and debilitating side effect of antipsychotics. Although genome-wide association studies of antipsychotic-induced weight gain have been performed, few genome-wide loci have been discovered. Moreover, these genome-wide association studies have included a wide variety of antipsychotic compounds. AIMS: We aim to gain more insight in the genomic loci affecting antipsychotic-induced weight gain. Given the variable pharmacological properties of antipsychotics, we hypothesized that targeting a single antipsychotic compound would provide new clues about genomic loci affecting antipsychotic-induced weight gain.Entities:
Keywords: GWAS; Pharmacogenetics; amisulpride-induced weight gain; antipsychotics; body mass index; schizophrenia
Mesh:
Substances:
Year: 2020 PMID: 32126890 PMCID: PMC7222287 DOI: 10.1177/0269881120907972
Source DB: PubMed Journal: J Psychopharmacol ISSN: 0269-8811 Impact factor: 4.153
The baseline characteristics of the OPTiMiSE subset included in this study (n=206).
| Characteristics | |
|---|---|
| Sex, number | Male |
| Female | |
| Age, mean (years) | 26.4 ±6.3 |
| Duration of study, mean (days) | 34.6 ±5.3 |
| Dose amisulpride, mean (mg/day) | 442 ±118 |
| Baseline PANSS, mean | 79.4 ±19.9 |
| PANSS score change (%), mean | −26.2 ±19.9 |
| PANSS score change, mean | −22.2 ±18.4 |
| Baseline BMI, mean | 23.3 ±4.1 |
| BMI change per month, mean | 0.89 ±1.11 |
| Weight gain per month (kg), mean | 2.89 ±3.53 |
BMI: body mass index; OPTiMiSE: Optimization of Treatment and Management of Schizophrenia in Europe; PANSS: Positive and Negative Scale Score.
Figure1.Manhattan plot of this genome-wide association study (GWAS) showing rs78310016 exceeding the GWAS significance threshold. On the y-axis log linear p values are listed (blue line=1 × 10−05, indicating suggestive significance; red line=5 × 10−08, indicating genome-wide significance) whereas position in base pair is reported on the x-axis. Supplementary Table 4 lists all single-nucleotide polymorphisms (SNPs) p < 1 × 10−05.
The most significantly associated SNPs with BMI (Body Mass Index) increase due to amisulpride treatment; depicted are those with a p value < 5 × 10−05; the genome-wide significant SNP is shown in bold.
| SNP | BP | Annotation | Nearest gene(s) | A1 | MAF | CADD | β[ | |
|---|---|---|---|---|---|---|---|---|
|
|
|
|
|
|
|
|
| |
| rs57818938 | 5:2278069 | intergenic | Y_RNA | T | 0.0611 | 0.920 | 0.9321 | 1.254 × 10−06 |
| rs10278819 | 7:92057320 | ncRNA_intronic | TMBIM7P | C | 0.1023 | 8.766 | 0.8730 | 1.846 × 10−06 |
| rs7024062 | 9:71745073 | intronic | TJP2 | A | 0.1931 | 4.992 | −0.5885 | 2.217 × 10−06 |
| rs10070777 | 5:87424765 | intergenic | TMEM161B | A | 0.0743 | 13.98 | 0.8786 | 3.824 × 10−06 |
| rs13230004 | 7:5345350 | UTR3 | SLC29A4 | A | 0.2724 | 0.357 | 0.5336 | 4.244 × 10−06 |
| rs1048163 | 15:40543223 | UTR3 | PAK6 C15orf56 | G | 0.3383 | 2.795 | 0.4495 | 4.864 × 10−06 |
β is the regression coefficient of the linear regression analysis.
SNP: single-nucleotide polymorphism; BP: basepair; A1: Minor allele; MAF: minor allele frequencies; CADD: Combined Annotation Dependent Depletion (a measure for deleterioudness of SNPs).
Figure 2.Location of genome-wide significant rs78310016 in an intergenic region on chromosome 5 including single-nucleotide polymorphisms (SNPs) with minor allele frequencies (MAF) >0.01, created in Locuszoom (Pruim et al., 2010).
Figure 3.Boxplot of weight gain in kilograms (kg) per rs78310016 genotype. As a result of underrepresentation of the GG genotype (n=1), it was merged with the AG (n=27) genotype. G-allele carriers (n=28) gained on average 5.04 kg (SD=3.76) and the non-carrier group (n=178) 2.56 kg (SD=3.39) (FANOVA=12.49, p=5.06 × 10−04).