Literature DB >> 26656879

Genome-Wide Association Study Suggested the PTPRD Polymorphisms Were Associated With Weight Gain Effects of Atypical Antipsychotic Medications.

Hao Yu, Lifang Wang1, Luxian Lv2, Cuicui Ma3, Bo Du4, Tianlan Lu1, Chao Jin3, Hao Yan1, Yongfeng Yang2, Wenqiang Li2, Yanyan Ruan1, Hongyan Zhang1, Hongxing Zhang2, Weifeng Mi1, Bryan Mowry5, Wenbin Ma3, Keqing Li4, Dai Zhang6, Weihua Yue7.   

Abstract

BACKGROUND: Antipsychotic-induced weight gain (AIWG) is a serious concern in therapy with antipsychotic medications. To identify single nucleotide polymorphisms (SNPs) associated with AIWG, we conducted a genome-wide association study (GWAS) for antipsychotic treatment.
METHODS: The discovery cohort consisted of 534 patients with schizophrenia, who underwent 8-week treatment with antipsychotics and were genotyped using the Illumina Human 610-Quad BeadChip. The independent replication cohort consisted of 547 patients with schizophrenia, treated with similar antipsychotics, and genotyped using the Sequenom MassARRAY platform. Two hundred and thirty-six drug-naive patients treated with risperidone or quetiapine were analyzed independently. Additionally, we conducted pathway and expression analyses using several public bioinformatics databases.
RESULTS: After correction for age and gender, the top 2 genome-wide significant SNPs with AIWG were located in the PTPRD gene (protein tyrosine phosphatase, receptor type D, 9p24-p23; rs10977144, P GWAS = 9.26E-09; rs10977154, P GWAS = 4.53E-08). The third most significant SNP was in the GFPT2 gene (glutamine-fructose-6-phosphate amidotransferase 2, 5q35.3; rs12386481, P GWAS = 1.98E-07). These results were validated in the replication cohort (rs10977144, P Replication = 4.30E-03; rs10977154, P Replication = 6.33E-03; rs12386481, P Replication =7.65E-03). These results were also verified in those patients initially exposed to risperidone and quetiapine (rs10977144, P = 1.97E-05; rs10977154, P = 2.04E-05; rs12386481, P = 1.97E-04). Pathway analyses showed that AIWG may involve in multiple pathways related to metabolic processes. Moreover, PTPRD mRNA might be highly expressed in brain regions, and the SNPs (rs10977144, rs1097154) also showed significant expression quantitative trait locus effects.
CONCLUSIONS: Our findings indicate that PTPRD polymorphisms might modulate AIWG.
© The Author 2015. Published by Oxford University Press on behalf of the Maryland Psychiatric Research Center. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  D (PTPRD); antipsychotic-induced weight gain (AIWG); genome-wide association study; protein tyrosine phosphatase; receptor type; schizophrenia

Mesh:

Substances:

Year:  2015        PMID: 26656879      PMCID: PMC4838100          DOI: 10.1093/schbul/sbv179

Source DB:  PubMed          Journal:  Schizophr Bull        ISSN: 0586-7614            Impact factor:   9.306


  38 in total

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Journal:  Nat Genet       Date:  2011-10-30       Impact factor: 38.330

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Review 9.  Genomewide association studies: history, rationale, and prospects for psychiatric disorders.

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5.  Genetic validation study of protein tyrosine phosphatase receptor type D (PTPRD) gene variants and risk for antipsychotic-induced weight gain.

Authors:  Malgorzata Maciukiewicz; Ilona Gorbovskaya; Arun K Tiwari; Clement C Zai; Natalie Freeman; Herbert Y Meltzer; James L Kennedy; Daniel J Müller
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7.  Systems-Level Analysis of Genetic Variants Reveals Functional and Spatiotemporal Context in Treatment-resistant Schizophrenia.

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Review 8.  Progress in genome-wide association studies of schizophrenia in Han Chinese populations.

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