Literature DB >> 32107512

Engineering bromodomains with a photoactive amino acid by engaging 'Privileged' tRNA synthetases.

Shana Wagner1, Babu Sudhamalla1, Philip Mannes1, Sushma Sappa1, Sam Kavoosi1, Debasis Dey1, Sinan Wang1, Kabirul Islam1.   

Abstract

Site-specific placement of unnatural amino acids, particularly those responsive to light, offers an elegant approach to control protein function and capture their fleeting 'interactome'. Herein, we have resurrected 4-(trifluoromethyldiazirinyl)-phenylalanine, an underutilized photo-crosslinker, by introducing several key features including easy synthetic access, site-specific incorporation by 'privileged' synthetases and superior crosslinking efficiency, to develop photo-crosslinkable bromodomains suitable for 'interactome' profiling.

Entities:  

Year:  2020        PMID: 32107512     DOI: 10.1039/c9cc09891g

Source DB:  PubMed          Journal:  Chem Commun (Camb)        ISSN: 1359-7345            Impact factor:   6.222


  4 in total

Review 1.  Beyond the marks: reader-effectors as drivers of epigenetics and chromatin engineering.

Authors:  Kierra A Franklin; Cara E Shields; Karmella A Haynes
Journal:  Trends Biochem Sci       Date:  2022-05       Impact factor: 14.264

2.  Engineering a methyllysine reader with photoactive amino acid in mammalian cells.

Authors:  Simran Arora; Sushma Sappa; Kathryn Hinkelman; Kabirul Islam
Journal:  Chem Commun (Camb)       Date:  2020-09-14       Impact factor: 6.222

Review 3.  Opportunity knocks for uncovering the new function of an understudied nucleosome remodeling complex member, the bromodomain PHD finger transcription factor, BPTF.

Authors:  Huda Zahid; Noelle M Olson; William C K Pomerantz
Journal:  Curr Opin Chem Biol       Date:  2021-03-08       Impact factor: 8.972

4.  Hydrophobic cavity-directed azide-acetyllysine photochemistry for profiling non-histone interacting partners of bromodomain protein 1.

Authors:  Jordan Kuwik; Shana Wagner; Babu Sudhamalla; Ronald Debiec; Kabirul Islam
Journal:  RSC Chem Biol       Date:  2022-06-14
  4 in total

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