Literature DB >> 33706239

Opportunity knocks for uncovering the new function of an understudied nucleosome remodeling complex member, the bromodomain PHD finger transcription factor, BPTF.

Huda Zahid1, Noelle M Olson1, William C K Pomerantz2.   

Abstract

Nucleosome remodeling provides access to genomic DNA for recruitment of the transcriptional machinery to mediate gene expression. The aberrant function of nucleosome remodeling complexes has been correlated to human cancer, making them emerging therapeutic targets. The bromodomain PHD finger transcription factor, BPTF, is the largest member of the human nucleosome remodeling factor NURF. Over the last five years, BPTF has become increasingly identified as a protumorigenic factor, prompting investigations into the molecular mechanisms associated with BPTF function. Despite a druggable bromodomain, small molecule discovery is at an early stage. Here we highlight recent investigations into the biology being discovered for BPTF, chemical biology approaches used to study its function, and small molecule inhibitors being designed as future chemical probes and therapeutics.
Copyright © 2021 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  BPTF; Bromodomain; Chemical epigenetics; Chemical probe; NURF

Mesh:

Substances:

Year:  2021        PMID: 33706239      PMCID: PMC8384639          DOI: 10.1016/j.cbpa.2021.02.003

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.972


  72 in total

Review 1.  The bromodomain interaction module.

Authors:  Panagis Filippakopoulos; Stefan Knapp
Journal:  FEBS Lett       Date:  2012-05-03       Impact factor: 4.124

2.  Diverse epigenetic strategies interact to control epidermal differentiation.

Authors:  Klaas W Mulder; Xin Wang; Carles Escriu; Yoko Ito; Roland F Schwarz; Jesse Gillis; Gábor Sirokmány; Giacomo Donati; Santiago Uribe-Lewis; Paul Pavlidis; Adele Murrell; Florian Markowetz; Fiona M Watt
Journal:  Nat Cell Biol       Date:  2012-06-24       Impact factor: 28.824

3.  Functional interactions between NURF and Ctcf regulate gene expression.

Authors:  Zhijun Qiu; Carolyn Song; Navid Malakouti; Daniel Murray; Aymen Hariz; Mark Zimmerman; Derek Gygax; Aiman Alhazmi; Joseph W Landry
Journal:  Mol Cell Biol       Date:  2014-10-27       Impact factor: 4.272

4.  Evaluating the Advantages of Using 3D-Enriched Fragments for Targeting BET Bromodomains.

Authors:  Jorden A Johnson; Christos A Nicolaou; Steven E Kirberger; Anil K Pandey; Haitao Hu; William C K Pomerantz
Journal:  ACS Med Chem Lett       Date:  2019-11-22       Impact factor: 4.345

5.  Chromatin boundaries require functional collaboration between the hSET1 and NURF complexes.

Authors:  Xingguo Li; Shaohua Wang; Ying Li; Changwang Deng; Laurie A Steiner; Hua Xiao; Carl Wu; Jörg Bungert; Patrick G Gallagher; Gary Felsenfeld; Yi Qiu; Suming Huang
Journal:  Blood       Date:  2011-06-08       Impact factor: 22.113

6.  Quantifying the Selectivity of Protein-Protein and Small Molecule Interactions with Fluorinated Tandem Bromodomain Reader Proteins.

Authors:  Prakriti Kalra; Logan McGraw; Jennifer R Kimbrough; Anil K Pandey; Jonathan Solberg; Huarui Cui; Anand Divakaran; Kristen John; Jon E Hawkinson; William C K Pomerantz
Journal:  ACS Chem Biol       Date:  2020-11-03       Impact factor: 5.100

7.  Histone recognition and large-scale structural analysis of the human bromodomain family.

Authors:  Panagis Filippakopoulos; Sarah Picaud; Maria Mangos; Tracy Keates; Jean-Philippe Lambert; Dalia Barsyte-Lovejoy; Ildiko Felletar; Rudolf Volkmer; Susanne Müller; Tony Pawson; Anne-Claude Gingras; Cheryl H Arrowsmith; Stefan Knapp
Journal:  Cell       Date:  2012-03-30       Impact factor: 41.582

8.  Selective inhibition of BET bromodomains.

Authors:  Panagis Filippakopoulos; Jun Qi; Sarah Picaud; Yao Shen; William B Smith; Oleg Fedorov; Elizabeth M Morse; Tracey Keates; Tyler T Hickman; Ildiko Felletar; Martin Philpott; Shonagh Munro; Michael R McKeown; Yuchuan Wang; Amanda L Christie; Nathan West; Michael J Cameron; Brian Schwartz; Tom D Heightman; Nicholas La Thangue; Christopher A French; Olaf Wiest; Andrew L Kung; Stefan Knapp; James E Bradner
Journal:  Nature       Date:  2010-09-24       Impact factor: 49.962

9.  Gene dysregulation by histone variant H2A.Z in bladder cancer.

Authors:  Kyunghwan Kim; Vasu Punj; Jongkyu Choi; Kyu Heo; Jin-Man Kim; Peter W Laird; Woojin An
Journal:  Epigenetics Chromatin       Date:  2013-10-16       Impact factor: 4.954

10.  Accelerated chromatin biochemistry using DNA-barcoded nucleosome libraries.

Authors:  Uyen T T Nguyen; Lenka Bittova; Manuel M Müller; Beat Fierz; Yael David; Brian Houck-Loomis; Vanessa Feng; Geoffrey P Dann; Tom W Muir
Journal:  Nat Methods       Date:  2014-07-06       Impact factor: 28.547

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  2 in total

1.  New Design Rules for Developing Potent Cell-Active Inhibitors of the Nucleosome Remodeling Factor (NURF) via BPTF Bromodomain Inhibition.

Authors:  Huda Zahid; Caroline R Buchholz; Manjulata Singh; Michael F Ciccone; Alice Chan; Stanley Nithianantham; Ke Shi; Hideki Aihara; Marcus Fischer; Ernst Schönbrunn; Camila O Dos Santos; Joseph W Landry; William C K Pomerantz
Journal:  J Med Chem       Date:  2021-09-13       Impact factor: 8.039

2.  1-L Transcription in Alzheimer's Disease.

Authors:  Jozef Nahalka
Journal:  Curr Issues Mol Biol       Date:  2022-08-09       Impact factor: 2.976

  2 in total

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