Literature DB >> 32078766

SPLIT: Stable Protein Coacervation Using a Light Induced Transition.

Ellen H Reed1, Benjamin S Schuster2, Matthew C Good3, Daniel A Hammer1,4.   

Abstract

Protein coacervates serve as hubs to concentrate and sequester proteins and nucleotides and thus function as membraneless organelles to manipulate cell physiology. We have engineered a coacervating protein to create tunable, synthetic membraneless organelles that assemble in response to a single pulse of light. Coacervation is driven by the intrinsically disordered RGG domain from the protein LAF-1, and opto-responsiveness is coded by the protein PhoCl, which cleaves in response to 405 nm light. We developed a fusion protein containing a solubilizing maltose-binding protein domain, PhoCl, and two copies of the RGG domain. Several seconds of illumination at 405 nm is sufficient to cleave PhoCl, removing the solubilization domain and enabling RGG-driven coacervation within minutes in cellular-sized water-in-oil emulsions. An optimized version of this system displayed light-induced coacervation in Saccharomyces cerevisiae. The methods described here provide novel strategies for inducing protein phase separation using light.

Entities:  

Keywords:  PhoCl; RGG; biomolecular condensates; membraneless organelles; optogenetics; recombinant proteins

Mesh:

Substances:

Year:  2020        PMID: 32078766      PMCID: PMC7383129          DOI: 10.1021/acssynbio.9b00503

Source DB:  PubMed          Journal:  ACS Synth Biol        ISSN: 2161-5063            Impact factor:   5.110


  41 in total

1.  Engineered Ribonucleoprotein Granules Inhibit Translation in Protocells.

Authors:  Joseph R Simon; Seyed Ali Eghtesadi; Michael Dzuricky; Lingchong You; Ashutosh Chilkoti
Journal:  Mol Cell       Date:  2019-06-04       Impact factor: 17.970

Review 2.  The molecular language of membraneless organelles.

Authors:  Edward Gomes; James Shorter
Journal:  J Biol Chem       Date:  2018-07-25       Impact factor: 5.157

3.  Intracellular production of hydrogels and synthetic RNA granules by multivalent molecular interactions.

Authors:  Hideki Nakamura; Albert A Lee; Ali Sobhi Afshar; Shigeki Watanabe; Elmer Rho; Shiva Razavi; Allister Suarez; Yu-Chun Lin; Makoto Tanigawa; Brian Huang; Robert DeRose; Diana Bobb; William Hong; Sandra B Gabelli; John Goutsias; Takanari Inoue
Journal:  Nat Mater       Date:  2017-11-06       Impact factor: 43.841

4.  Lethal effects of high-intensity violet 405-nm light on Saccharomyces cerevisiae, Candida albicans, and on dormant and germinating spores of Aspergillus niger.

Authors:  L E Murdoch; K McKenzie; M Maclean; S J Macgregor; J G Anderson
Journal:  Fungal Biol       Date:  2013-05-30

Review 5.  Phase separation in biology; functional organization of a higher order.

Authors:  Diana M Mitrea; Richard W Kriwacki
Journal:  Cell Commun Signal       Date:  2016-01-05       Impact factor: 5.712

6.  Sequence heuristics to encode phase behaviour in intrinsically disordered protein polymers.

Authors:  Felipe García Quiroz; Ashutosh Chilkoti
Journal:  Nat Mater       Date:  2015-09-21       Impact factor: 43.841

7.  Measurement of Rapid Protein Diffusion in the Cytoplasm by Photo-Converted Intensity Profile Expansion.

Authors:  Rotem Gura Sadovsky; Shlomi Brielle; Daniel Kaganovich; Jeremy L England
Journal:  Cell Rep       Date:  2017-03-14       Impact factor: 9.423

8.  Temperature-Controlled Liquid-Liquid Phase Separation of Disordered Proteins.

Authors:  Gregory L Dignon; Wenwei Zheng; Young C Kim; Jeetain Mittal
Journal:  ACS Cent Sci       Date:  2019-05-01       Impact factor: 14.553

9.  Light-based control of metabolic flux through assembly of synthetic organelles.

Authors:  Evan M Zhao; Nathan Suek; Maxwell Z Wilson; Elliot Dine; Nicole L Pannucci; Zemer Gitai; José L Avalos; Jared E Toettcher
Journal:  Nat Chem Biol       Date:  2019-05-13       Impact factor: 15.040

Review 10.  Controlling compartmentalization by non-membrane-bound organelles.

Authors:  Richard J Wheeler; Anthony A Hyman
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-05-26       Impact factor: 6.237

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  7 in total

1.  Amphiphilic proteins coassemble into multiphasic condensates and act as biomolecular surfactants.

Authors:  Fleurie M Kelley; Bruna Favetta; Roshan Mammen Regy; Jeetain Mittal; Benjamin S Schuster
Journal:  Proc Natl Acad Sci U S A       Date:  2021-12-21       Impact factor: 12.779

2.  Incorporation and Assembly of a Light-Emitting Enzymatic Reaction into Model Protein Condensates.

Authors:  Muyang Guan; Mikael V Garabedian; Marcel Leutenegger; Benjamin S Schuster; Matthew C Good; Daniel A Hammer
Journal:  Biochemistry       Date:  2021-10-14       Impact factor: 3.321

Review 3.  Relevance of Electrostatic Charges in Compactness, Aggregation, and Phase Separation of Intrinsically Disordered Proteins.

Authors:  Greta Bianchi; Sonia Longhi; Rita Grandori; Stefania Brocca
Journal:  Int J Mol Sci       Date:  2020-08-27       Impact factor: 5.923

Review 4.  Modulating biomolecular condensates: a novel approach to drug discovery.

Authors:  Diana M Mitrea; Matthäus Mittasch; Beatriz Ferreira Gomes; Isaac A Klein; Mark A Murcko
Journal:  Nat Rev Drug Discov       Date:  2022-08-16       Impact factor: 112.288

5.  Photocleavable proteins that undergo fast and efficient dissociation.

Authors:  Xiaocen Lu; Yurong Wen; Shuce Zhang; Wei Zhang; Yilun Chen; Yi Shen; M Joanne Lemieux; Robert E Campbell
Journal:  Chem Sci       Date:  2021-05-31       Impact factor: 9.825

6.  Designed and biologically active protein lattices.

Authors:  Shih-Ting Wang; Brian Minevich; Jianfang Liu; Honghu Zhang; Dmytro Nykypanchuk; James Byrnes; Wu Liu; Lev Bershadsky; Qun Liu; Tong Wang; Gang Ren; Oleg Gang
Journal:  Nat Commun       Date:  2021-06-17       Impact factor: 14.919

7.  Designer membraneless organelles sequester native factors for control of cell behavior.

Authors:  Mikael V Garabedian; Wentao Wang; Jorge B Dabdoub; Michelle Tong; Reese M Caldwell; William Benman; Benjamin S Schuster; Alexander Deiters; Matthew C Good
Journal:  Nat Chem Biol       Date:  2021-08-02       Impact factor: 15.040

  7 in total

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