| Literature DB >> 32075136 |
Concetta Imperatore1,2, Roberto Gimmelli3, Marco Persico1,2, Marcello Casertano1,2, Alessandra Guidi3, Fulvio Saccoccia3, Giovina Ruberti3, Paolo Luciano1, Anna Aiello1,2, Silvia Parapini4, Sibel Avunduk5, Nicoletta Basilico6, Caterina Fattorusso1,2, Marialuisa Menna1,2.
Abstract
The chemical analysis of the sponge Dysidea avara afforded the known sesquiterpene quinone avarone, along with its reduced form avarol. To further explore the role of the thiazinoquinone scaffold as an antiplasmodial, antileishmanial and antischistosomal agent, we converted the quinone avarone into the thiazinoquinone derivative thiazoavarone. The semisynthetic compound, as well as the natural metabolites avarone and avarol, were pharmacologically investigated in order to assess their antiparasitic properties against sexual and asexual stages of Plasmodium falciparum, larval and adult developmental stages of Schistosoma mansoni (eggs included), and also against promastigotes and amastigotes of Leishmania infantum and Leishmania tropica. Furthermore, in depth computational studies including density functional theory (DFT) calculations were performed. A toxic semiquinone radical species which can be produced starting both from quinone- and hydroquinone-based compounds could mediate the anti-parasitic effects of the tested compounds.Entities:
Keywords: 3D-SAR analysis; DFT studies; Dysidea avara; Leishmania spp.; Plasmodium falciparum; Schistosoma mansoni; avarone/avarol; dioxothiazinoquinone; quinones and hydroquinones; redox-active compounds
Mesh:
Substances:
Year: 2020 PMID: 32075136 PMCID: PMC7074381 DOI: 10.3390/md18020112
Source DB: PubMed Journal: Mar Drugs ISSN: 1660-3397 Impact factor: 5.118
Figure 1Structures of aplidinones A, B and of thiazinoquinone derivatives.
Figure 2Structure of avarone (1), the semisynthetic thiazoavarone (2) and avarol (3).
Scheme 1Coupling of avarone (1) with hypotaurine via nucleophilic addition reaction.
Figure 3Key 1H-13C HMBC correlations of thiazoavarone (2).
1H (700 MHz) and 13C (125 MHz) NMR data of thiazoavarone (2) in CDCl3.
| Pos. | δC | δH, mult. ( | Pos. | δC | δH, mult. ( |
|---|---|---|---|---|---|
|
| - | - |
| 143.7 | - |
|
| 48.8 | 3.30, m |
| 38.3 | - |
|
| 39.8 | 4.05, m |
| 35.8 | 1.03 a, 1.64 a |
|
| - | 6.41, br s |
| 27.3 | 1.38 a |
|
| 143.2 | - |
| 37.1 | 1.25 a |
|
| 179.3 | - |
| 43.7 | - |
|
| 131.8 | 6.50, s |
| 47.5 | 1.03 a |
|
| 152.8 | - |
| 17.9 | 1.53, s |
|
| 177.1 | - |
| 20.0 | 0.99, s |
|
| 111.6 | - |
| 16.7 | 0.96, d, (6.2) |
|
| 19.3 | 1.50 a, 1.85, dd, (6.7, 13.2) |
| 17.7 | 0.85, s |
|
| 26.3 | 1.93 a, 2.04 a |
| 35.6 | 2.50, d, (13.1) |
|
| 120.9 | 5.2, br s |
| 2.70, d, (13.1) |
a Overlapped by other signals.
In vitro antimalarial activity against asexual P. falciparum parasites from D10 (CQ-sensitive) and W2 (CQ-resistant) strains a and against stage V P. falciparum gametocytes from a 3D7 transgenic line.
| Compounds | D10 (μM) b | W2 (μM) b | |
|---|---|---|---|
| Avarone ( | 2.74 ± 0.51 | 2.09 ± 0.52 | 15.53 ± 5.26 |
| Thiazoavarone ( | 0.38 ± 0.15 | 0.21 ± 0.03 | 15.01 ± 3.19 |
| Avarol ( | 0.96 ± 0.24 | 1.10 ± 0.15 | 9.30 ± 1.90 |
| Methylene blue | - | - | 0.155 ± 0.05 |
a Chloroquine (CQ) has been used as positive control (D10 IC50 = 0.04 ± 0.01; W2 IC50 = 0.54 ± 0.28). b The results are the mean ± SD of IC50 of three independent experiments performed in duplicate.
IC50 against HMEC-1 (human microvascular endothelial cells) and THP-1 (human acute monocytic leukemia cells) and Selectivity Index (SI) of the compounds 1–3.
| Compounds | HMEC-1 IC50 (μM) a,b | THP-1 IC50 (μM) a,c | SI d | |
|---|---|---|---|---|
| D10 | W2 | |||
| Avarone ( | 62.19 ± 1.98 | >100 | 22.7 | 29.8 |
| Thiazoavarone ( | 3.31 ± 1.53 | 7.41 | 8.7 | 15.8 |
| Avarol ( | 36.85 ± 5.79 | 31.75 | 38.4 | 33.5 |
a Camptothecin has been used as positive control (IC50 (μM) = 0.018 ± 0.008 on HMEC-1). b Data are expressed as mean ± SD of three different experiments performed in duplicate. c Data are the mean of two different experiments in duplicate. d SI = IC50 HMEC-1/IC50 P. falciparum strain.
Activity of compounds 1–3 against promastigote stage of L. infantum and L. tropica and against amastigote stage of L. infantum.
| Compounds | SIp c | SIp c | SIa d | |||
|---|---|---|---|---|---|---|
| Avarone ( | 28.21 ± 0.32 | 2.2 | 20.28 ± 3.56 | 3.1 | 7.64 | 8.1 |
| Thiazoavarone ( | 8.78 ± 0.26 | 0.38 | 9.52 ± 0.32 | 0.35 | 4.99 | 0.67 |
| Avarol ( | 7.42 ± 0.27 | 5.0 | 7.08 ± 1.91 | 5.2 | 3.19 | 11.6 |
| Amphotericin B | 0.20 ± 0.03 | 0.17 ± 0.04 | 0.189 |
a Data are expressed as mean ± SD of three different experiments performed in duplicate. b Data are the mean of two different experiments in triplicate. c SIp = IC50 HMEC-1/IC50 L. infantum (L. tropica) promastigotes. d SIa = IC50 HMEC-1/IC50 L. infantum amastigotes.
Activity of compounds 1–3 against S. mansoni schistosomula.
| Compounds | LC50 (μM) a |
|---|---|
| Avarone ( | 42.77 ± 1.90 |
| Thiazoavarone ( | 5.90 ± 2.59 |
| Avarol ( | 33.97± 5.52 |
a Data are expressed as mean ± SD of three different experiments.
Figure 4Compounds 1–3 impair adult S. mansoni viability. Worm pairs were incubated with DMSO (vehicle) (black circle) or the indicated compounds at 50 μM (yellow triangle), or 20 μM (green, square) as described in material and methods. Phenotype analysis was recorded for 7 days and % viability represents the mean ± SEM of three independent experiments.
Figure 5Thiazoavarone (2) impairs egg viability and maturation. Representative pictures of IVLEs treated with vehicle (DMSO) (a) or compound 2 at 5 μM (b) and 20 μM (c) for 72 h. Filled red arrows indicate viable eggs at stages III–V (intermediate/developed); filled red triangle indicate viable eggs at stages I–II (immature); red-edged arrows indicate damaged eggs at stages III–V; red-edged triangle indicate damaged eggs at stages I–II. Bar, 200 μm.
ΔEGM values (kcal/mol) and torsion angle values (degrees) of the DFT conformers of 2.
| Conformer a | ΔEGM (kcal/mol) | Torsion Angles (°) | |
|---|---|---|---|
| τ1 b | τ2 c | ||
|
| 0.00 | 100.38 | 60.20 |
|
| 0.50 | −110.21 | 55.83 |
|
| 1.04 | 110.37 | −72.73 |
|
| 1.25 | −102.31 | 179.90 |
|
| 2.03 | 87.13 | 158.72 |
|
| 3.02 | −84.08 | −54.03 |
a Only the conformational enantiomers with the value of τflip ~60° are reported. b τ1 torsion angle is defined by e, f, g, and h atoms. c τ2 torsion angle is calculated considering f, g, h, and i atoms.
ΔEGM values (kcal/mol) and torsion angle values (degrees) of the DFT conformers of 1.
| Conformer | ΔEGM | Torsion Angles | |
|---|---|---|---|
| (kcal/mol) | (°) | ||
| τ1 a | τ2 b | ||
|
| 0.00 | −91.95 | 64.65 |
|
| 0.01 | 101.16 | 60.62 |
|
| 1.20 | −92.79 | 169.87 |
|
| 1.25 | 96.73 | −58.29 |
|
| 2.33 | 84.62 | 173.14 |
|
| 2.64 | −81.09 | −54.96 |
a τ1 torsion angle is defined by a, b, c, and d atoms. b τ2 torsion angle is calculated considering b, c, d, and e atoms.
Figure 6Density functional theory DFT conformers of compounds 1–3 superimposed by the carbon atoms of the quinone/hydroquinone ring. Carbon atoms are colored according to conformer classification (I = green, II = magenta, III = pink, IV = light blue, V = orange, and VI = Yellow); heteroatoms are colored by atom type (H = white, O = red, N = blue, S = orange). Hydrogens are omitted for sake of clarity, with the exception of those of the first methylene group of the R′ substituent, whose intramolecular distances from the nearby oxygen atom of the quinone are reported.
Figure 7(A): DFT global minimum energy conformer (GM) structure of 1 (Q), DFT conformer I of 3 (QH2) and their semiquinone radical (QH•). (B) DFT GM structure of 2 (Q) together with its one- and two-electron reduced species QH• and QH2. Atoms possibly involved in an intramolecular radical shift are evidenced with red dashed lines. The LUMO of 1 and 2, and the HOMO of 3 are visualized using GaussView with an isosurface value of 0.02 e−/a.u.3 The NBO spin density isosurface of the QH• species is displayed using GaussView with an isosurface value of 0.01 e−/a.u.3. The blue surface (positive spin density) corresponds to an excess of α-electron density.
DFT calculated parameters and standard redox potentials (E°; Q/Q•−) of compounds 1–3.
| Cmp. | Conf. | ELUMO a | ESOMO a | ESOMO a | ΔG°red, aq a | E° b | ΔG°H+ a |
|---|---|---|---|---|---|---|---|
| (Q) | (Q•−) | (QH•) | (Q/Q•−) | (Q/Q•−) | (Q•−/QH•) | ||
|
| I | −10.62 | −143.34 | −106.45 | −94.58 | −328.57 | −279.60 |
|
| II | −10.68 | −143.42 | −106.60 | −95.13 | −304.65 | −279.87 |
|
| I | −17.76 | −148.69 | −158.60 | −95.29 | −297.63 | −272.91 |
|
| II | −17.83 | −148.72 | −159.93 | −95.66 | −281.68 | −273.03 |
a kcal/mol. b mV.
DFT calculated parameters and standard redox potentials (E°; QH•/QH−) of compounds 1–3.
| Cmp. | Conf. | ΔG°red,aq a | E° b | ΔG°H+ a | IP a | EHOMO a |
|---|---|---|---|---|---|---|
| (QH•/QH−) | (QH•/QH−) | (QH−/QH2) | (QH−) | (QH2) | ||
|
| I | −91.67 | −454.64 | −295.41 | 61.09 | −158.06 |
|
| II | −89.95 | −529.31 | −296.77 | 60.83 | −156.34 |
|
| I | −95.22 | −300.60 | −290.49 | 130.87 | −158.18 |
|
| II | −95.24 | −299.70 | −289.55 | 130.94 | −159.27 |
a kcal/mol. b mV.
Scheme 2Born–Haber cycle for a generic one-electron transfer reaction in vacuo and in aqueous solution.