Literature DB >> 32051563

Conserved chromosomal functions of RNA interference.

Michael J Gutbrod1, Robert A Martienssen2,3.   

Abstract

RNA interference (RNAi), a cellular process through which small RNAs target and regulate complementary RNA transcripts, has well-characterized roles in post-transcriptional gene regulation and transposon repression. Recent studies have revealed additional conserved roles for RNAi proteins, such as Argonaute and Dicer, in chromosome function. By guiding chromatin modification, RNAi components promote chromosome segregation during both mitosis and meiosis and regulate chromosomal and genomic dosage response. Small RNAs and the RNAi machinery also participate in the resolution of DNA damage. Interestingly, many of these lesser-studied functions seem to be more strongly conserved across eukaryotes than are well-characterized functions such as the processing of microRNAs. These findings have implications for the evolution of RNAi since the last eukaryotic common ancestor, and they provide a more complete view of the functions of RNAi.

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Year:  2020        PMID: 32051563      PMCID: PMC9478574          DOI: 10.1038/s41576-019-0203-6

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   59.581


  217 in total

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Journal:  Cell       Date:  2004-12-17       Impact factor: 41.582

2.  RNA interference guides histone modification during the S phase of chromosomal replication.

Authors:  Anna Kloc; Mikel Zaratiegui; Elphege Nora; Rob Martienssen
Journal:  Curr Biol       Date:  2008-04-08       Impact factor: 10.834

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Authors:  Reina Komiya; Hajime Ohyanagi; Mitsuru Niihama; Toshiaki Watanabe; Mutsuko Nakano; Nori Kurata; Ken-Ichi Nonomura
Journal:  Plant J       Date:  2014-04-15       Impact factor: 6.417

4.  Accurate Chromosome Segregation at First Meiotic Division Requires AGO4, a Protein Involved in RNA-Dependent DNA Methylation in Arabidopsis thaliana.

Authors:  Cecilia Oliver; Juan Luis Santos; Mónica Pradillo
Journal:  Genetics       Date:  2016-07-27       Impact factor: 4.562

5.  RNAi-dependent H3K27 methylation is required for heterochromatin formation and DNA elimination in Tetrahymena.

Authors:  Yifan Liu; Sean D Taverna; Tara L Muratore; Jeffrey Shabanowitz; Donald F Hunt; C David Allis
Journal:  Genes Dev       Date:  2007-06-15       Impact factor: 11.361

6.  Requirement for the ERI/DICER complex in endogenous RNA interference and sperm development in Caenorhabditis elegans.

Authors:  Derek M Pavelec; Jennifer Lachowiec; Thomas F Duchaine; Harold E Smith; Scott Kennedy
Journal:  Genetics       Date:  2009-09-21       Impact factor: 4.562

7.  Local effect of enhancer of zeste-like reveals cooperation of epigenetic and cis-acting determinants for zygotic genome rearrangements.

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Journal:  PLoS Genet       Date:  2014-09-25       Impact factor: 5.917

8.  Chromatin That Guides Dosage Compensation Is Modulated by the siRNA Pathway in Drosophila melanogaster.

Authors:  Nikita Deshpande; Victoria H Meller
Journal:  Genetics       Date:  2018-06-19       Impact factor: 4.562

Review 9.  Whats, hows and whys of programmed DNA elimination in Tetrahymena.

Authors:  Tomoko Noto; Kazufumi Mochizuki
Journal:  Open Biol       Date:  2017-10       Impact factor: 6.411

10.  Hidden sequence specificity in loading of single-stranded RNAs onto Drosophila Argonautes.

Authors:  Eling Goh; Katsutomo Okamura
Journal:  Nucleic Acids Res       Date:  2019-04-08       Impact factor: 16.971

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  20 in total

Review 1.  Gene repression in S. cerevisiae-looking beyond Sir-dependent gene silencing.

Authors:  Safia Mahabub Sauty; Kholoud Shaban; Krassimir Yankulov
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Journal:  PLoS Biol       Date:  2022-06-29       Impact factor: 9.593

Review 3.  Evolution of eukaryotic centromeres by drive and suppression of selfish genetic elements.

Authors:  Tomohiro Kumon; Michael A Lampson
Journal:  Semin Cell Dev Biol       Date:  2022-03-26       Impact factor: 7.499

4.  How does epigenetics influence the course of evolution?

Authors:  Alyson Ashe; Vincent Colot; Benjamin P Oldroyd
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2021-04-19       Impact factor: 6.671

Review 5.  Advances in RNAi-Assisted Strain Engineering in Saccharomyces cerevisiae.

Authors:  Yongcan Chen; Erpeng Guo; Jianzhi Zhang; Tong Si
Journal:  Front Bioeng Biotechnol       Date:  2020-07-02

Review 6.  Mobility connects: transposable elements wire new transcriptional networks by transferring transcription factor binding motifs.

Authors:  Yichun Qiu; Claudia Köhler
Journal:  Biochem Soc Trans       Date:  2020-06-30       Impact factor: 5.407

Review 7.  The interface between coronaviruses and host cell RNA biology: Novel potential insights for future therapeutic intervention.

Authors:  David G Maranon; John R Anderson; Abril G Maranon; Jeffrey Wilusz
Journal:  Wiley Interdiscip Rev RNA       Date:  2020-07-07       Impact factor: 9.957

Review 8.  Emerging role of RNA methyltransferase METTL3 in gastrointestinal cancer.

Authors:  Qiang Wang; Wei Geng; Huimin Guo; Zhangding Wang; Kaiyue Xu; Chen Chen; Shouyu Wang
Journal:  J Hematol Oncol       Date:  2020-05-19       Impact factor: 17.388

9.  Environmental RNA interference in two-spotted spider mite, Tetranychus urticae, reveals dsRNA processing requirements for efficient RNAi response.

Authors:  Nicolas Bensoussan; Sameer Dixit; Midori Tabara; David Letwin; Maja Milojevic; Michele Antonacci; Pengyu Jin; Yuka Arai; Kristie Bruinsma; Takeshi Suzuki; Toshiyuki Fukuhara; Vladimir Zhurov; Sven Geibel; Ralf Nauen; Miodrag Grbic; Vojislava Grbic
Journal:  Sci Rep       Date:  2020-11-05       Impact factor: 4.379

10.  RNAi-Related Dicer and Argonaute Proteins Play Critical Roles for Meiocyte Formation, Chromosome-Axes Lengths and Crossover Patterning in the Fungus Sordaria macrospora.

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Journal:  Front Cell Dev Biol       Date:  2021-06-28
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