| Literature DB >> 32033462 |
Atif Mehmood1, Muazzam Maqsood2, Muzaffar Bashir3, Yang Shuyuan1.
Abstract
Alzheimer's disease (AD) may cause damage to the memory cells permanently, which results in the form of dementia. The diagnosis of Alzheimer's disease at an early stage is a problematic task for researchers. For this, machine learning and deep convolutional neural network (CNN) based approaches are readily available to solve various problems related to brain image data analysis. In clinical research, magnetic resonance imaging (MRI) is used to diagnose AD. For accurate classification of dementia stages, we need highly discriminative features obtained from MRI images. Recently advanced deep CNN-based models successfully proved their accuracy. However, due to a smaller number of image samples available in the datasets, there exist problems of over-fitting hindering the performance of deep learning approaches. In this research, we developed a Siamese convolutional neural network (SCNN) model inspired by VGG-16 (also called Oxford Net) to classify dementia stages. In our approach, we extend the insufficient and imbalanced data by using augmentation approaches. Experiments are performed on a publicly available dataset open access series of imaging studies (OASIS), by using the proposed approach, an excellent test accuracy of 99.05% is achieved for the classification of dementia stages. We compared our model with the state-of-the-art models and discovered that the proposed model outperformed the state-of-the-art models in terms of performance, efficiency, and accuracy.Entities:
Keywords: Alzheimer’s disease; batch normalization; classification; convolutional neural network; deep learning; dementia
Year: 2020 PMID: 32033462 PMCID: PMC7071616 DOI: 10.3390/brainsci10020084
Source DB: PubMed Journal: Brain Sci ISSN: 2076-3425
Feature extraction and classification layers in the proposed SCNN model.
| Layer No. | Layer Name | Kernel Size | Pool Size | No. of Filters |
|---|---|---|---|---|
|
| Conv1 + ReLU | 3 | 64 | |
| Batch Normalization | ||||
|
| Conv2 + ReLU | 3 | 64 | |
| Maxpooling1 | 2 | |||
|
| Conv3 + ReLU | 3 | 128 | |
| Gaussian Noise | ||||
| Batch Normalization | ||||
|
| Conv4 + ReLU | 3 | 128 | |
| Maxpooling2 | 2 | |||
|
| Conv5 + ReLU | 3 | 256 | |
| Batch Normalization | ||||
|
| Conv6 + ReLU | 3 | 256 | |
|
| Conv7 + ReLU | 3 | 256 | |
| Gaussian Noise | ||||
|
| Conv8 + ReLU | 3 | 256 | |
| Maxpooling3 | 2 | |||
|
| Conv9 + ReLU | 3 | 512 | |
|
| Conv10 + ReLU | 3 | 512 | |
|
| Conv11 + ReLU | 3 | 512 | |
| Maxpooling4 | 2 | |||
|
| Conv12 + ReLU | 3 | 512 | |
| Gaussian Noise | ||||
|
| Conv13 + ReLU | 3 | 512 | |
|
| Conv14 + ReLU | 3 | 512 | |
| Maxpooling5 | 2 | |||
|
| Flatten1 | |||
|
| Flatten2 | |||
|
| Concatenate | |||
|
| FC1 + ReLU 4096 | |||
|
| FC2 + ReLU 4096 | |||
|
| Softmax |
Figure 1Proposed siamese convolutional neural network (SCNN) model for the Classification of Alzheimer’s Stages.
Summary of the global clinical dementia rating (CDR).
| Clinical Dementia Rate (RATE) | No. of Samples |
|---|---|
| CDR-0 (No Dementia) | 167 |
| CDR-0.5 (Very Mild Dementia) | 87 |
| CDR-1 (Mild-Dementia) | 105 |
| CDR-2 (Moderate AD) | 23 |
Data augmentation.
| Rotation Range | 10 Degree |
|---|---|
| Width shift range | 0.1 Degree |
| Height shift range | 0.1 Degree |
| Shear range | 0.15 Degree |
| Zoom range | 0.5, 1.5 |
| Channel shift range | 150.0 |
Figure 2Proposed model data flow chat.
Proposed model confusion matrix on the OASIS data.
| Actual Class | Predicted | Class | ||
|---|---|---|---|---|
| ND | VMD | MD | MAD | |
| No Dementia (ND) | 334 | 0 | 0 | 0 |
| Very Mild Dementia (VMD) | 0 | 170 | 4 | 0 |
| Mild Dementia (MD) | 0 | 3 | 207 | 0 |
| Moderate AD (MAD) | 0 | 0 | 0 | 46 |
Figure 3Proposed model training and validation accuracy.
Figure 4Proposed model training and validation loss.
Figure 5Training loss results with three normalization techniques on the AD dataset.
Figure 6Validation accuracy with three normalization techniques applied to the AD dataset.
Comparison of accuracy values with state-of-the-art techniques applied to diagnose Alzheimer’s disease stages.
| Paper | Method | Dataset | Accuracy |
|---|---|---|---|
| Islam et al. [ | ResNet, CNN | OASIS (MRI) | 93.18% |
| Hosseini et al. [ | 3D-DSA-CNN | ADNI (MRI) | 97.60% |
| Evign et al. [ | 3D-CNN | ADNI (MRI) | 98.01% |
| Farooq et al. [ | GoogLeNet | OASIS (MRI) | 98.88% |
| Khan et al. [ | VGG | ADNI (MRI) | 99.36% |
| Proposed Method | SCNN | OASIS (MRI) | 99.05% |