Literature DB >> 36246840

Deep Learning Classification of Breast Cancer Tissue from Terahertz Imaging Through Wavelet Synchro-Squeezed Transformation and Transfer Learning.

Haoyan Liu1, Nagma Vohra2, Keith Bailey3, Magda El-Shenawee2, Alexander H Nelson1.   

Abstract

Terahertz imaging and spectroscopy is an exciting technology that has the potential to provide insights in medical imaging. Prior research has leveraged statistical inference to classify tissue regions from terahertz images. To date, these approaches have shown that the segmentation problem is challenging for images of fresh tissue and for tumors that have invaded muscular regions. Artificial intelligence, particularly machine learning and deep learning, has been shown to improve performance in some medical imaging challenges. This paper builds on that literature by modifying a set of deep learning approaches to the challenge of classifying tissue regions of images captured by terahertz imaging and spectroscopy of freshly excised murine xenograft tissue. Our approach is to preprocess the images through a wavelet synchronous-squeezed transformation (WSST) to convert time-sequential terahertz data of each THz pixel to a spectrogram. Spectrograms are used as input tensors to a deep convolution neural network for pixel-wise classification. Based on the classification result of each pixel, a cancer tissue segmentation map is achieved. In experimentation, we adopt leave-one-sample-out cross-validation strategy, and evaluate our chosen networks and results using multiple metrics such as accuracy, precision, intersection, and size. The results from this experimentation demonstrate improvement in classification accuracy compared to statistical methods, an improvement to segmentation between muscle and cancerous regions in xenograft tumors, and identify areas to improve the imaging and classification methodology.

Entities:  

Keywords:  Deep learning; Signal processing; Terahertz imaging

Year:  2022        PMID: 36246840      PMCID: PMC9558445          DOI: 10.1007/s10762-021-00839-x

Source DB:  PubMed          Journal:  J Infrared Millim Terahertz Waves        ISSN: 1866-6892            Impact factor:   2.647


  28 in total

1.  Extension of breast cancer: comparison of CT and MRI.

Authors:  Hiroshi Nakahara; Kiyoshi Namba; Hideyuki Wakamatsu; Ryoji Watanabe; Hidemi Furusawa; Mitsunori Shirouzu; Takafumi Matsu; Chiaki Tanaka; Futoshi Akiyama; Hiromi Ifuku; Mayumi Nakahara; Shozo Tamura
Journal:  Radiat Med       Date:  2002 Jan-Feb

2.  Classification of terahertz-pulsed imaging data from excised breast tissue.

Authors:  Anthony J Fitzgerald; Sarah Pinder; Anand D Purushotham; Padraig O'Kelly; Philip C Ashworth; Vincent P Wallace
Journal:  J Biomed Opt       Date:  2012-01       Impact factor: 3.170

Review 3.  Machine Learning for Medical Imaging.

Authors:  Bradley J Erickson; Panagiotis Korfiatis; Zeynettin Akkus; Timothy L Kline
Journal:  Radiographics       Date:  2017-02-17       Impact factor: 5.333

4.  Unsupervised pathology detection in medical images using conditional variational autoencoders.

Authors:  Hristina Uzunova; Sandra Schultz; Heinz Handels; Jan Ehrhardt
Journal:  Int J Comput Assist Radiol Surg       Date:  2018-12-12       Impact factor: 2.924

Review 5.  Autoencoders for unsupervised anomaly segmentation in brain MR images: A comparative study.

Authors:  Christoph Baur; Stefan Denner; Benedikt Wiestler; Nassir Navab; Shadi Albarqouni
Journal:  Med Image Anal       Date:  2021-01-02       Impact factor: 8.545

6.  Analysis of time-varying signals using continuous wavelet and synchrosqueezed transforms.

Authors:  Jean Baptiste Tary; Roberto Henry Herrera; Mirko van der Baan
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2018-08-13       Impact factor: 4.226

7.  Using deep Siamese neural networks for detection of brain asymmetries associated with Alzheimer's Disease and Mild Cognitive Impairment.

Authors:  Chin-Fu Liu; Shreyas Padhy; Sandhya Ramachandran; Victor X Wang; Andrew Efimov; Alonso Bernal; Linyuan Shi; Marc Vaillant; J Tilak Ratnanather; Andreia V Faria; Brian Caffo; Marilyn Albert; Michael I Miller
Journal:  Magn Reson Imaging       Date:  2019-07-15       Impact factor: 2.546

8.  Cancer detection in excised breast tumors using terahertz imaging and spectroscopy.

Authors:  Magda El-Shenawee; Nagma Vohra; Tyler Bowman; Keith Bailey
Journal:  Biomed Spectrosc Imaging       Date:  2019-07-09

9.  Feasibility of terahertz imaging for discrimination of human hepatocellular carcinoma.

Authors:  Feng Duan; Yu-Ye Wang; De-Gang Xu; Jia Shi; Lin-Yu Chen; Li Cui; Yan-Hua Bai; Yong Xu; Jing Yuan; Chao Chang
Journal:  World J Gastrointest Oncol       Date:  2019-02-15

10.  Role of magnetic resonance imaging in breast cancer management.

Authors:  Selvi Radhakrishna; S Agarwal; Purvish M Parikh; K Kaur; Shikha Panwar; Shelly Sharma; Ashish Dey; K K Saxena; Madhavi Chandra; Seema Sud
Journal:  South Asian J Cancer       Date:  2018 Apr-Jun
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