Literature DB >> 32032513

The Canadian Rare Diseases Models and Mechanisms (RDMM) Network: Connecting Understudied Genes to Model Organisms.

Kym M Boycott1, Philippe M Campeau2, Heather E Howley3, Paul Pavlidis4, Sanja Rogic4, Christine Oriel5, Jason N Berman3, Robert M Hamilton6, Geoffrey G Hicks7, Howard D Lipshitz8, Jean-Yves Masson9, Eric A Shoubridge10, Anne Junker11, Michel R Leroux12, Christopher R McMaster13, Jaques L Michaud2, Stuart E Turvey10, David Dyment3, A Micheil Innes14, Clara D van Karnebeek15, Anna Lehman16, Ronald D Cohn17, Ian M MacDonald18, Richard A Rachubinski17, Patrick Frosk19, Anthony Vandersteen20, Richard W Wozniak21, Izabella A Pena3, Xiao-Yan Wen22, Thierry Lacaze-Masmonteil23, Catharine Rankin24, Philip Hieter25.   

Abstract

Advances in genomics have transformed our ability to identify the genetic causes of rare diseases (RDs), yet we have a limited understanding of the mechanistic roles of most genes in health and disease. When a novel RD gene is first discovered, there is minimal insight into its biological function, the pathogenic mechanisms of disease-causing variants, and how therapy might be approached. To address this gap, the Canadian Rare Diseases Models and Mechanisms (RDMM) Network was established to connect clinicians discovering new disease genes with Canadian scientists able to study equivalent genes and pathways in model organisms (MOs). The Network is built around a registry of more than 500 Canadian MO scientists, representing expertise for over 7,500 human genes. RDMM uses a committee process to identify and evaluate clinician-MO scientist collaborations and approve 25,000 Canadian dollars in catalyst funding. To date, we have made 85 clinician-MO scientist connections and funded 105 projects. These collaborations help confirm variant pathogenicity and unravel the molecular mechanisms of RD, and also test novel therapies and lead to long-term collaborations. To expand the impact and reach of this model, we made the RDMM Registry open-source, portable, and customizable, and we freely share our committee structures and processes. We are currently working with emerging networks in Europe, Australia, and Japan to link international RDMM networks and registries and enable matches across borders. We will continue to create meaningful collaborations, generate knowledge, and advance RD research locally and globally for the benefit of patients and families living with RD.
Copyright © 2020 American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  functional insight; gene discovery; model organisms; rare genetic diseases

Mesh:

Substances:

Year:  2020        PMID: 32032513      PMCID: PMC7010971          DOI: 10.1016/j.ajhg.2020.01.009

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  30 in total

1.  Mutations in ILK, encoding integrin-linked kinase, are associated with arrhythmogenic cardiomyopathy.

Authors:  Andreas Brodehl; Saman Rezazadeh; Tatjana Williams; Nicole M Munsie; Daniel Liedtke; Tracey Oh; Raechel Ferrier; Yaoqing Shen; Steven J M Jones; Amy L Stiegler; Titus J Boggon; Henry J Duff; Jan M Friedman; William T Gibson; Sarah J Childs; Brenda Gerull
Journal:  Transl Res       Date:  2019-02-15       Impact factor: 7.012

2.  Non-Synonymous variants in premelanosome protein (PMEL) cause ocular pigment dispersion and pigmentary glaucoma.

Authors:  Adrian A Lahola-Chomiak; Tim Footz; Kim Nguyen-Phuoc; Gavin J Neil; Baojian Fan; Keri F Allen; David S Greenfield; Richard K Parrish; Kevin Linkroum; Louis R Pasquale; Ralf M Leonhardt; Robert Ritch; Shari Javadiyan; Jamie E Craig; W T Allison; Ordan J Lehmann; Michael A Walter; Janey L Wiggs
Journal:  Hum Mol Genet       Date:  2019-04-15       Impact factor: 6.150

3.  The Matchmaker Exchange: a platform for rare disease gene discovery.

Authors:  Anthony A Philippakis; Danielle R Azzariti; Sergi Beltran; Anthony J Brookes; Catherine A Brownstein; Michael Brudno; Han G Brunner; Orion J Buske; Knox Carey; Cassie Doll; Sergiu Dumitriu; Stephanie O M Dyke; Johan T den Dunnen; Helen V Firth; Richard A Gibbs; Marta Girdea; Michael Gonzalez; Melissa A Haendel; Ada Hamosh; Ingrid A Holm; Lijia Huang; Matthew E Hurles; Ben Hutton; Joel B Krier; Andriy Misyura; Christopher J Mungall; Justin Paschall; Benedict Paten; Peter N Robinson; François Schiettecatte; Nara L Sobreira; Ganesh J Swaminathan; Peter E Taschner; Sharon F Terry; Nicole L Washington; Stephan Züchner; Kym M Boycott; Heidi L Rehm
Journal:  Hum Mutat       Date:  2015-10       Impact factor: 4.878

4.  The unsolved rare genetic disease atlas? An analysis of the unexplained phenotypic descriptions in OMIM®.

Authors:  Taila Hartley; Tuğçe B Balcı; Samantha K Rojas; Alison Eaton; Care Rare Canada; David A Dyment; Kym M Boycott
Journal:  Am J Med Genet C Semin Med Genet       Date:  2018-12       Impact factor: 3.908

5.  A Gain-of-Function Mutation in NALCN in a Child with Intellectual Disability, Ataxia, and Arthrogryposis.

Authors:  Kyota Aoyagi; Elsa Rossignol; Fadi F Hamdan; Ben Mulcahy; Lin Xie; Shinya Nagamatsu; Guy A Rouleau; Mei Zhen; Jacques L Michaud
Journal:  Hum Mutat       Date:  2015-06-22       Impact factor: 4.878

6.  NANS-mediated synthesis of sialic acid is required for brain and skeletal development.

Authors:  Clara D M van Karnebeek; Luisa Bonafé; Xiao-Yan Wen; Maja Tarailo-Graovac; Sara Balzano; Beryl Royer-Bertrand; Angel Ashikov; Livia Garavelli; Isabella Mammi; Licia Turolla; Catherine Breen; Dian Donnai; Valérie Cormier-Daire; Delphine Heron; Gen Nishimura; Shinichi Uchikawa; Belinda Campos-Xavier; Antonio Rossi; Thierry Hennet; Koroboshka Brand-Arzamendi; Jacob Rozmus; Keith Harshman; Brian J Stevenson; Enrico Girardi; Giulio Superti-Furga; Tammie Dewan; Alissa Collingridge; Jessie Halparin; Colin J Ross; Margot I Van Allen; Andrea Rossi; Udo F Engelke; Leo A J Kluijtmans; Ed van der Heeft; Herma Renkema; Arjan de Brouwer; Karin Huijben; Fokje Zijlstra; Torben Heise; Thomas Boltje; Wyeth W Wasserman; Carlo Rivolta; Sheila Unger; Dirk J Lefeber; Ron A Wevers; Andrea Superti-Furga
Journal:  Nat Genet       Date:  2016-05-23       Impact factor: 38.330

7.  Glutaminase Deficiency Caused by Short Tandem Repeat Expansion in GLS.

Authors:  André B P van Kuilenburg; Maja Tarailo-Graovac; Phillip A Richmond; Britt I Drögemöller; Mahmoud A Pouladi; René Leen; Koroboshka Brand-Arzamendi; Doreen Dobritzsch; Egor Dolzhenko; Michael A Eberle; Bruce Hayward; Meaghan J Jones; Farhad Karbassi; Michael S Kobor; Janet Koster; Daman Kumari; Meng Li; Julia MacIsaac; Cassandra McDonald; Judith Meijer; Charlotte Nguyen; Indhu-Shree Rajan-Babu; Stephen W Scherer; Bernice Sim; Brett Trost; Laura A Tseng; Marjolein Turkenburg; Joke J F A van Vugt; Jan H Veldink; Jagdeep S Walia; Youdong Wang; Michel van Weeghel; Galen E B Wright; Xiaohong Xu; Ryan K C Yuen; Jinqiu Zhang; Colin J Ross; Wyeth W Wasserman; Michael T Geraghty; Saikat Santra; Ronald J A Wanders; Xiao-Yan Wen; Hans R Waterham; Karen Usdin; Clara D M van Karnebeek
Journal:  N Engl J Med       Date:  2019-04-11       Impact factor: 91.245

Review 8.  Future of Rare Diseases Research 2017-2027: An IRDiRC Perspective.

Authors:  Christopher P Austin; Christine M Cutillo; Lilian P L Lau; Anneliene H Jonker; Ana Rath; Daria Julkowska; David Thomson; Sharon F Terry; Béatrice de Montleau; Diego Ardigò; Virginie Hivert; Kym M Boycott; Gareth Baynam; Petra Kaufmann; Domenica Taruscio; Hanns Lochmüller; Makoto Suematsu; Carlo Incerti; Ruxandra Draghia-Akli; Irene Norstedt; Lu Wang; Hugh J S Dawkins
Journal:  Clin Transl Sci       Date:  2017-10-23       Impact factor: 4.689

9.  International Cooperation to Enable the Diagnosis of All Rare Genetic Diseases.

Authors:  Kym M Boycott; Ana Rath; Jessica X Chong; Taila Hartley; Fowzan S Alkuraya; Gareth Baynam; Anthony J Brookes; Michael Brudno; Angel Carracedo; Johan T den Dunnen; Stephanie O M Dyke; Xavier Estivill; Jack Goldblatt; Catherine Gonthier; Stephen C Groft; Ivo Gut; Ada Hamosh; Philip Hieter; Sophie Höhn; Matthew E Hurles; Petra Kaufmann; Bartha M Knoppers; Jeffrey P Krischer; Milan Macek; Gert Matthijs; Annie Olry; Samantha Parker; Justin Paschall; Anthony A Philippakis; Heidi L Rehm; Peter N Robinson; Pak-Chung Sham; Rumen Stefanov; Domenica Taruscio; Divya Unni; Megan R Vanstone; Feng Zhang; Han Brunner; Michael J Bamshad; Hanns Lochmüller
Journal:  Am J Hum Genet       Date:  2017-05-04       Impact factor: 11.025

10.  Large-scale investigation of the reasons why potentially important genes are ignored.

Authors:  Thomas Stoeger; Martin Gerlach; Richard I Morimoto; Luís A Nunes Amaral
Journal:  PLoS Biol       Date:  2018-09-18       Impact factor: 8.029

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  16 in total

1.  Model matchmaking.

Authors:  Ellen P Neff
Journal:  Lab Anim (NY)       Date:  2021-02       Impact factor: 12.625

2.  Model Organisms: Nature's Gift to Disease Research.

Authors: 
Journal:  Genetics       Date:  2020-02       Impact factor: 4.562

3.  Functional Studies of Genetic Variants Associated with Human Diseases in Notch Signaling-Related Genes Using Drosophila.

Authors:  Sheng-An Yang; Jose L Salazar; David Li-Kroeger; Shinya Yamamoto
Journal:  Methods Mol Biol       Date:  2022

4.  Seven years since the launch of the Matchmaker Exchange: The evolution of genomic matchmaking.

Authors:  Kym M Boycott; Danielle R Azzariti; Ada Hamosh; Heidi L Rehm
Journal:  Hum Mutat       Date:  2022-05-10       Impact factor: 4.700

5.  ModelMatcher: A scientist-centric online platform to facilitate collaborations between stakeholders of rare and undiagnosed disease research.

Authors:  J Michael Harnish; Lucian Li; Sanja Rogic; Guillaume Poirier-Morency; Seon-Young Kim; Kym M Boycott; Michael F Wangler; Hugo J Bellen; Philip Hieter; Paul Pavlidis; Zhandong Liu; Shinya Yamamoto
Journal:  Hum Mutat       Date:  2022-03-24       Impact factor: 4.700

6.  Lessons learnt from multifaceted diagnostic approaches to the first 150 families in Victoria's Undiagnosed Diseases Program.

Authors:  Thomas Cloney; Lyndon Gallacher; Lynn S Pais; Natalie B Tan; Alison Yeung; Zornitza Stark; Natasha J Brown; George McGillivray; Martin B Delatycki; Michelle G de Silva; Lilian Downie; Chloe A Stutterd; Justine Elliott; Alison G Compton; Alysia Lovgren; Ralph Oertel; David Francis; Katrina M Bell; Simon Sadedin; Sze Chern Lim; Guy Helman; Cas Simons; Daniel G Macarthur; David R Thorburn; Anne H O'Donnell-Luria; John Christodoulou; Susan M White; Tiong Yang Tan
Journal:  J Med Genet       Date:  2021-11-05       Impact factor: 5.941

Review 7.  Using Drosophila to drive the diagnosis and understand the mechanisms of rare human diseases.

Authors:  Nichole Link; Hugo J Bellen
Journal:  Development       Date:  2020-09-28       Impact factor: 6.868

8.  Model organisms contribute to diagnosis and discovery in the undiagnosed diseases network: current state and a future vision.

Authors:  Dustin Baldridge; Michael F Wangler; Angela N Bowman; Shinya Yamamoto; Tim Schedl; Stephen C Pak; John H Postlethwait; Jimann Shin; Lilianna Solnica-Krezel; Hugo J Bellen; Monte Westerfield
Journal:  Orphanet J Rare Dis       Date:  2021-05-07       Impact factor: 4.123

Review 9.  Advances in mouse genetics for the study of human disease.

Authors:  Steve D M Brown
Journal:  Hum Mol Genet       Date:  2021-10-01       Impact factor: 6.150

10.  Solve-RD: systematic pan-European data sharing and collaborative analysis to solve rare diseases.

Authors:  Birte Zurek; Kornelia Ellwanger; Lisenka E L M Vissers; Rebecca Schüle; Matthis Synofzik; Ana Töpf; Richarda M de Voer; Steven Laurie; Leslie Matalonga; Christian Gilissen; Stephan Ossowski; Peter A C 't Hoen; Antonio Vitobello; Julia M Schulze-Hentrich; Olaf Riess; Han G Brunner; Anthony J Brookes; Ana Rath; Gisèle Bonne; Gulcin Gumus; Alain Verloes; Nicoline Hoogerbrugge; Teresinha Evangelista; Tina Harmuth; Morris Swertz; Dylan Spalding; Alexander Hoischen; Sergi Beltran; Holm Graessner
Journal:  Eur J Hum Genet       Date:  2021-06-01       Impact factor: 4.246

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