| Literature DB >> 32024039 |
Maroun M Sfeir1,2, Cristina Jiménez-Ortigosa3, Maria N Gamaletsou4, Audrey N Schuetz5, Rosemary Soave1,6, Koen Van Besien7, Catherine B Small1,6, David S Perlin3, Thomas J Walsh1,6,8.
Abstract
BACKGROUND: Candida tropicalis is a virulent fungal pathogen for which echinocandins are the primary therapy. Emergence of resistance to echinocandins of C. tropicalis carries potentially ominous therapeutic implications.Entities:
Keywords: Candida tropicalis; FKS1 gene; candidemia; echinocandin resistance
Year: 2020 PMID: 32024039 PMCID: PMC7151208 DOI: 10.3390/jof6010020
Source DB: PubMed Journal: J Fungi (Basel) ISSN: 2309-608X
Oligonucleotides used for FKS1 PCR and sequencing.
| Organism | Hot Spot 1 Forward Primer | Hot Spot 1 Reverse Primer | Hot Spot 2 Forward Primer | Hot Spot 2 Forward Primer |
|---|---|---|---|---|
|
| AATGGGCTGGTGCTCAACAT | CCTTCAATTTCAGATGGAACTTGATG | AAGATTGGTGCTGGTATGGG | TAATGGTGCTTGCCAATGAG |
* primers used for sequencing.
Characteristics of the cases of echinocandin-resistant Candida tropicalis infections.
| Published Case, Year of Publication | Age | Sex | Underlying Condition | Source | Antifungal Treatment in the Previous 3 Months | ANF | CAS | MCF | FLU | ITR MIC | VOR MIC | POS MIC | AMP MIC | 5FC MIC | FKS1 Hot Spot Sequence Analysis | Antifungal Treatment | Outcome |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Grosset M. et al., | 37 | M | Tuberculosis | blood | caspofungin then voriconazole | 0.5 | 4 | 0.5 | 0.5 | NA | 0.06 | 0.06 | 0.06 | 0.124 | FKS1-S645P | liposomal amphotericin B and flucytosine then voriconazole | survived |
| Jensen R. et al., | 51 | F | ALL | blood | voriconazole then caspofungin | 0.25 | >32 | 1 | 0.5 | ≤0.03 | ≤0.03 | ≤0.03 | 0.5 | NA | FKS1-S80S/P | amphotericin B | survived |
| Garcia-Effron G. et al., | 84 | M | ALL | blood | caspofungin | 2 | 4 | 2 | 8 | 0.5 | 1 | 0.25 | NA | NA | FKS1- S645P | voriconazole | survived |
| Garcia-Effron G. et al., | 59 | M | Large-cell lymphoma-allo-HSCT | blood | caspofungin | 1 | 4 | 2 | 32 | 1 | 2 | 1 | NA | NA | FKS1- F641L | liposomal amphotericin B | survived |
| Garcia-Effron G. et al., | 45 | M | Hodgkin lymphoma, renal cell carcinoma, esophageal cancer | blood | caspofungin | 0.5 | 1 | 0.5 | 0.5 | 0.125 | 0.03 | 0.06 | NA | NA | FKS1- S645P | fluconazole | died |
| Garcia-Effron G. et al., | 28 | F | AML | blood | caspofungin | 1 | 4 | 1 | 1 | NA | NA | NA | NA | NA | FKS1-F641S | fluconazole | survived |
| Pfeiffer CD et al., | 65 | F | Bilateral lung transplant recipient | blood | micafungin | 4, 2 | 8, 4 | 2,2 | NA | NA | NA | NA | NA | NA | FKS1- S80S/P | amphotericin B lipid complex | died |
| Pfeiffer CD et al., | 45 | F | Ventral hernia | blood, pleural fluid | micafungin | 0.12 | 0.25 | 0.06 | NA | NA | NA | NA | NA | NA | None | amphotericin B lipid complex | died |
| Kofteridids D. et al., | 60 | M | Large B cell lymphoma-HSCT | blood | voriconazole | NA | 8 | NA | 32 | NA | 1 | 2 | 0.5 | NA | NA | liposomal amphotericin + voriconazole | survived |
| Kofteridids D. et al., | 66 | F | AML- HSCT | blood | voriconazole | NA | 16 | NA | 1 | NA | 0.2 | 0.06 | 0.5 | NA | NA | voriconazole | survived |
| Kofteridids D. et al., | 84 | M | ALL, prostate cancer | blood | caspofungin | NA | 8 | NA | 8 | NA | 0.25 | 0.2 | 0.5 | NA | NA | caspofungin + voriconazole | survived |
| Khan Z. et al., | 34 | F | Multiple sclerosis on natalizumab | endotracheal secretions (two | caspofungin | 1; 1 * | 16; 32 * | 0.5; 075 * | 1; 0.5* | 0.031; 0.063 * | 0.063; 0.125 * | 0.063; 0.016 * | 0.25; 0.25* | NA; NA* | FKS1-S654P | caspofungin | died |
| Xiao M. et al., Inf | 69 | F | Asthma, pulmonary infection, coronary artery disease, multiple organ dysfunction | chest drainage | micafungin x18 days | 2 | 4 | 2 | 2 | 0.25 | 0.125 | 0.25 | 0.5 | ≤0.06 | FKS1-S80P | voriconazole | died |
| Index case #1 | 87 | M | Urothelial carcinoma | blood | micafungin | 1 | 4 | 2 | 128 | NA | 8 | 0.5 | 1 | 0.12 | FKS1-S654P | liposomal amphotericin B | survived |
| Index case #2. | 41 | F | AML | blood | micafungin | 2 | 16 | 4 | 1 | NA | 0.12 | 0.12 | 0.5 | 0.12 | FKS1-S654P | voriconazole | died |
Abbreviations: NA: not available; ALL: acute lymphoblastic leukemia; AML: acute myeloblastic leukemia; allo-HSCT: allogeneic hematopoietic stem cell transplant; ANF: anidulafungin; CAS: caspofungin; MCF: micafungin; FLU: fluconazole; ITR: itraconazole; VOR: voriconazole; POS: posaconazole; AMP: amphotericin B; 5FC: flucytosine; MIC: minimum inhibitory concentration in µg/mL; M: male; F: female; TPN, total parenteral nutrition. * Correspond to MIC of second C. tropicalis isolate.
Demographics and clinical characteristics of patients with echinocandin-resistant Candida tropicalis bloodstream infections.
| Characteristic | |
|---|---|
| Age, years, median ± SD | 59.5 ± 18.7 |
| Gender | |
| Male | 7 (47) |
| Female | 8 (53) |
| Comorbidities | |
| ALL * | 3 (20) |
| AML | 2 (13) |
| Lymphoma * | 3 (20) |
| Urothelial cancer | 1 (7) |
| Multiple sclerosis | 1 (7) |
| COPD/ | 1 (7) |
| Prior exposure to echinocandins | 13 (87) |
| Echinocandin resistance occurrence | |
| Breakthrough resistance while on echinocandin | 12 (80) |
| 2 (13) | |
| Outcome | |
| Recovery | 9 (60) |
| Death | 6 (40) |
Abbreviations: ALL: acute lymphoblastic leukemia; AML: acute myeloblastic leukemia. * One patient had prostate cancer in addition to ALL and another patient had renal cell carcinoma and esophageal malignancy concomitantly with lymphoma.
FKS1 Hot Spot1 sequencing of the Candida tropicalis isolates.
| DNA Sequence | Protein | |
|---|---|---|
| ATCC 750 Ref strain | TTCTTGACTTTGTCTTTAAGAGATCCA | FLTLSLRDP |
| BL37986 | TTCTTGACTTTGTCTTTAAGAGATCCA | FLTLSLRDP |
| BL38734 | TTCTTGACTTTG | FLTL |
| Isolate 2 | TTCTTGACTTTG | FLTL |
The red letters designate the mutations at the nucleotide and amino acid level.
Figure 1DNA sequencing chromatograms for Candida tropicalis BL37986 and BL38734 isolates identified in blood of Index case #1. Hot spot 1 region sequence is shown in black in the reference strain ATCC750 used as control. The red box indicates the T-to-C mutation.
Figure 2DNA sequencing chromatograms for Candida tropicalis isolate 2 strain isolated from blood of Index case # 2. HS1 sequence is shown in black in the reference strain ATCC750 used as control. The red box indicates the T-to-C mutation.