| Literature DB >> 32019283 |
Yujun Park1, Jiwon Koh2, Hee Young Na1, Yoonjin Kwak2, Keun-Wook Lee3, Sang-Hoon Ahn4, Do Joong Park4, Hyung-Ho Kim4, Hye Seung Lee1.
Abstract
PURPOSE: We provide a comparison between 22C3 pharmDx and SP263 assay, for evaluating programmed death ligand 1 (PD-L1) expression in advanced gastric cancer (GC) patients.Entities:
Keywords: 22C3 pharmDx; Gastric neoplasms; Immunohistochemistry; Programmed cell death ligand 1; SP263 assay
Mesh:
Substances:
Year: 2020 PMID: 32019283 PMCID: PMC7373862 DOI: 10.4143/crt.2019.718
Source DB: PubMed Journal: Cancer Res Treat ISSN: 1598-2998 Impact factor: 4.679
Fig. 1.Representative tumor microarray core stained with the 22C3 pharmDx and SP 263 assay according to the combined positive score (CPS) distribution (core magnification, ×50; inlet, ×200).
Fig. 2.Correlation between the 22C3 pharmDx and SP263 assay for the combined positive score (CPS) (A) and tumor proportion score (TPS) (B) at the center of the tumor and invasive margin in gastric cancer samples.
Fig. 3.Programmed death ligand 1 expression distribution of the 22C3 pharmDx and SP263 assay for the combined positive score (CPS) (A, B) and tumor proportion score (TPS) (C, D) at the center of the tumor (CT) and invasive margin (IM) by intervals.
The number of PD-L1–positive gastric cancer cases
| 22C3 (n=379) | SP263 (n=379) | |||||||
|---|---|---|---|---|---|---|---|---|
| CT | IM | CT | IM | |||||
| Positive | Negative | Positive | Negative | Positive | Negative | Positive | Negative | |
| CPS ≥ 1 | 219 (57.8) | 160 (42.2) | 170 (44.9) | 209 (55.1) | 231 (60.9) | 148 (39.1) | 175 (46.2) | 204 (53.8) |
| CPS ≥ 10 | 37 (9.8) | 342 (90.2) | 50 (13.2) | 329 (86.8) | 36 (9.5) | 343 (90.5) | 49 (12.9) | 330 (87.1) |
| TPS ≥ 1% | 118 (31.1) | 261 (68.9) | 104 (27.4) | 275 (72.6) | 125 (33.0) | 254 (67.0) | 115 (30.3) | 264 (69.7) |
| TPS ≥ 10% | 28 (7.4) | 351 (92.6) | 30 (7.9) | 349 (92.1) | 29 (7.7) | 350 (92.3) | 34 (9.0) | 345 (91.0) |
Values are presented as number (%). PD-L1, programmed death ligand 1; CT, center of tumor; IM, invasive margin; CPS, combined positive score; TPS, tumor proportion score.
Agreement and Cohen’s kappa values between center of tumor and invasive margin
| 22C3 | SP263 | |||
|---|---|---|---|---|
| Agreement (%) | Cohen's kappa (lower 95% CI) | Agreement (%) | Cohen's kappa (lower 95% CI) | |
| CPS ≥ 1 | 77.6 | 0.559 (47.8) | 77.8 | 0.564 (48.5) |
| CPS ≥ 10 | 92.9 | 0.650 (52.9) | 91.8 | 0.590 (46.0) |
| TPS ≥ 1% | 84.7 | 0.631 (54.6) | 85.8 | 0.671 (59.0) |
| TPS ≥ 10% | 94.7 | 0.623 (47.5) | 94.5 | 0.637 (49.3) |
CI, confidence interval; CPS, combined positive score; TPS, tumor proportion score.
OPA, PPA, and NPA between 22C3 pharmDx and SP263 assay
| OPA (lower 95% CI, %) | PPA (lower 95% CI, %) | NPA (lower 95% CI, %) | ||||
|---|---|---|---|---|---|---|
| CT | IM | CT | IM | CT | IM | |
| CPS ≥ 1 | 94.7 (92.0) | 94.5 (91.7) | 98.2 (95.4) | 95.3 (90.9) | 90.0 (84.3) | 93.8 (89.6) |
| CPS ≥ 10 | 99.2 (97.7) | 98.7 (97.0) | 94.6 (81.8) | 94.0 (83.5) | 99.7 (98.4) | 99.4 (97.8) |
| TPS ≥ 1% | 97.1 (94.9) | 96.6 (94.2) | 98.3 (94.0) | 99.0 (94.8) | 96.6 (93.6) | 95.6 (92.5) |
| TPS ≥ 10% | 99.7 (98.5) | 98.4 (96.6) | 100 (87.7) | 96.7 (82.8) | 99.7 (98.4) | 98.6 (96.7) |
OPA, overall percent agreement; PPA, positive percent agreement; NPA, negative percent agreement; CI, confidence interval; CT, center of tumor; IM, invasive margin; CPS, combined positive score; TPS, tumor proportion score.
Interobserver variation between five pathologists by 22C3 pharmDx and SP263 assay
| Intraclass correlation coefficient (lower 95% CI) | Fleiss' Kappa (lower 95% CI) | |||
|---|---|---|---|---|
| CPS | TPS | CPS ≥ 1 | CPS ≥ 10 | |
| 22C3 | 0.387 (20.9) | 0.596 (40.5) | 0.389 (26.4) | 0.224 (8.0) |
| SP263 | 0.349 (13.5) | 0.710 (57.2) | 0.256 (15.6) | 0.140 (2.4) |
CI, confidence interval; CPS, combined positive score; TPS, tumor proportion score.
OPA, PPA, NPA, and Cohen’s kappa values between 22C3 pharmDx and SP263 assay (55 samples)
| OPA (lower 95% CI, %) | PPA (lower 95% CI, %) | NPA (lower 95% CI, %) | Cohen's kappa (lower 95% CI) | |
|---|---|---|---|---|
| A | 90.9 (80.1) | 100 (91.0) | 68.8 (41.3) | 0.757 (55.4) |
| B | 87.3 (75.5) | 100 (92.5) | 12.5 (0.3) | 0.196 (–14.5) |
| C | 98.2 (90.3) | 100 (93.4) | 0 | -[ |
| D | 76.4 (63.0) | 96.7 (82.8) | 52.0 (31.3) | 0.505 (28.5) |
| E | 98.2 (90.3) | 100 (89.4) | 95.5 (77.2) | 0.962 (88.5) |
| A | 90.9 (80.1) | 100 (86.8) | 82.8 (64.2) | 0.819 (66.6) |
| B | 87.3 (75.5) | 100 (92.5) | 12.5 (0.3) | 0.196 (–14.5) |
| C | 80.0 (67.0) | 88.6 (73.3) | 65.0 (40.8) | 0.554 (31.5) |
| D | 90.9 (80.1) | 88.9 (51.8) | 91.3 (79.2) | 0.707 (46.1) |
| E | 100 (93.5) | 100 (66.4) | 100 (92.3) | 100 (100) |
OPA, overall percent agreement; PPA, positive percent agreement; NPA, negative percent agreement; CI, confidence interval; CPS, combined positive score.
In all samples, SP263 CPS 1 is positive.