Literature DB >> 32007071

FCHL revisited: Faster and more accurate quantum machine learning.

Anders S Christensen1, Lars A Bratholm2, Felix A Faber1, O Anatole von Lilienfeld1.   

Abstract

We introduce the FCHL19 representation for atomic environments in molecules or condensed-phase systems. Machine learning models based on FCHL19 are able to yield predictions of atomic forces and energies of query compounds with chemical accuracy on the scale of milliseconds. FCHL19 is a revision of our previous work [F. A. Faber et al., J. Chem. Phys. 148, 241717 (2018)] where the representation is discretized and the individual features are rigorously optimized using Monte Carlo optimization. Combined with a Gaussian kernel function that incorporates elemental screening, chemical accuracy is reached for energy learning on the QM7b and QM9 datasets after training for minutes and hours, respectively. The model also shows good performance for non-bonded interactions in the condensed phase for a set of water clusters with a mean absolute error (MAE) binding energy error of less than 0.1 kcal/mol/molecule after training on 3200 samples. For force learning on the MD17 dataset, our optimized model similarly displays state-of-the-art accuracy with a regressor based on Gaussian process regression. When the revised FCHL19 representation is combined with the operator quantum machine learning regressor, forces and energies can be predicted in only a few milliseconds per atom. The model presented herein is fast and lightweight enough for use in general chemistry problems as well as molecular dynamics simulations.

Year:  2020        PMID: 32007071     DOI: 10.1063/1.5126701

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  23 in total

1.  Machine Learning for Electronically Excited States of Molecules.

Authors:  Julia Westermayr; Philipp Marquetand
Journal:  Chem Rev       Date:  2020-11-19       Impact factor: 60.622

2.  Informing geometric deep learning with electronic interactions to accelerate quantum chemistry.

Authors:  Zhuoran Qiao; Anders S Christensen; Matthew Welborn; Frederick R Manby; Anima Anandkumar; Thomas F Miller
Journal:  Proc Natl Acad Sci U S A       Date:  2022-07-28       Impact factor: 12.779

3.  NewtonNet: a Newtonian message passing network for deep learning of interatomic potentials and forces.

Authors:  Mojtaba Haghighatlari; Jie Li; Xingyi Guan; Oufan Zhang; Akshaya Das; Christopher J Stein; Farnaz Heidar-Zadeh; Meili Liu; Martin Head-Gordon; Luke Bertels; Hongxia Hao; Itai Leven; Teresa Head-Gordon
Journal:  Digit Discov       Date:  2022-04-27

4.  Learning to Make Chemical Predictions: the Interplay of Feature Representation, Data, and Machine Learning Methods.

Authors:  Mojtaba Haghighatlari; Jie Li; Farnaz Heidar-Zadeh; Yuchen Liu; Xingyi Guan; Teresa Head-Gordon
Journal:  Chem       Date:  2020-06-16       Impact factor: 22.804

Review 5.  Ab Initio Machine Learning in Chemical Compound Space.

Authors:  Bing Huang; O Anatole von Lilienfeld
Journal:  Chem Rev       Date:  2021-08-13       Impact factor: 60.622

6.  Machine Learning Force Fields.

Authors:  Oliver T Unke; Stefan Chmiela; Huziel E Sauceda; Michael Gastegger; Igor Poltavsky; Kristof T Schütt; Alexandre Tkatchenko; Klaus-Robert Müller
Journal:  Chem Rev       Date:  2021-03-11       Impact factor: 60.622

7.  Combining Machine Learning and Computational Chemistry for Predictive Insights Into Chemical Systems.

Authors:  John A Keith; Valentin Vassilev-Galindo; Bingqing Cheng; Stefan Chmiela; Michael Gastegger; Klaus-Robert Müller; Alexandre Tkatchenko
Journal:  Chem Rev       Date:  2021-07-07       Impact factor: 60.622

8.  BonDNet: a graph neural network for the prediction of bond dissociation energies for charged molecules.

Authors:  Mingjian Wen; Samuel M Blau; Evan Walter Clark Spotte-Smith; Shyam Dwaraknath; Kristin A Persson
Journal:  Chem Sci       Date:  2020-12-08       Impact factor: 9.825

9.  Machine learning based energy-free structure predictions of molecules, transition states, and solids.

Authors:  Dominik Lemm; Guido Falk von Rudorff; O Anatole von Lilienfeld
Journal:  Nat Commun       Date:  2021-07-22       Impact factor: 14.919

10.  A community-powered search of machine learning strategy space to find NMR property prediction models.

Authors:  Lars A Bratholm; Will Gerrard; Brandon Anderson; Shaojie Bai; Sunghwan Choi; Lam Dang; Pavel Hanchar; Addison Howard; Sanghoon Kim; Zico Kolter; Risi Kondor; Mordechai Kornbluth; Youhan Lee; Youngsoo Lee; Jonathan P Mailoa; Thanh Tu Nguyen; Milos Popovic; Goran Rakocevic; Walter Reade; Wonho Song; Luka Stojanovic; Erik H Thiede; Nebojsa Tijanic; Andres Torrubia; Devin Willmott; Craig P Butts; David R Glowacki
Journal:  PLoS One       Date:  2021-07-20       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.