| Literature DB >> 31996696 |
Anisha Rastogi1, Carlos E Vargas-Irwin2,3,4, Francis R Willett5,6,7, Jessica Abreu1,8, Douglas C Crowder1,8, Brian A Murphy1,8, William D Memberg1,8, Jonathan P Miller8,9,10, Jennifer A Sweet8,9,10, Benjamin L Walter8,11, Sydney S Cash12,13, Paymon G Rezaii5, Brian Franco14, Jad Saab3,15,4, Sergey D Stavisky5,6,7, Krishna V Shenoy6,7,16,17,18, Jaimie M Henderson5,7,19, Leigh R Hochberg15,12,4,13, Robert F Kirsch1,8, A Bolu Ajiboye20,21.
Abstract
Hybrid kinetic and kinematic intracortical brain-computer interfaces (iBCIs) have the potential to restore functional grasping and object interaction capabilities in individuals with tetraplegia. This requires an understanding of how kinetic information is represented in neural activity, and how this representation is affected by non-motor parameters such as volitional state (VoS), namely, whether one observes, imagines, or attempts an action. To this end, this work investigates how motor cortical neural activity changes when three human participants with tetraplegia observe, imagine, and attempt to produce three discrete hand grasping forces with the dominant hand. We show that force representation follows the same VoS-related trends as previously shown for directional arm movements; namely, that attempted force production recruits more neural activity compared to observed or imagined force production. Additionally, VoS-modulated neural activity to a greater extent than grasping force. Neural representation of forces was lower than expected, possibly due to compromised somatosensory pathways in individuals with tetraplegia, which have been shown to influence motor cortical activity. Nevertheless, attempted forces (but not always observed or imagined forces) could be decoded significantly above chance, thereby potentially providing relevant information towards the development of a hybrid kinetic and kinematic iBCI.Entities:
Mesh:
Year: 2020 PMID: 31996696 PMCID: PMC6989675 DOI: 10.1038/s41598-020-58097-1
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Figure 1(A) Experimental setup. Prior to the current study, participants were implanted with two 96-channel microelectrode arrays in motor cortex as a part of the BrainGate2 Pilot Clinical Trial. The microelectrode arrays recorded neural activity while participants completed a force task. Two neural features (threshold crossings, spike band powers) were extracted from each channel in the arrays. (B) Experimental session architecture. Each session consisted of 12–21 blocks, each of which contained ~20 trials (see Supplementary Table S1). In each trial, participants observed, imagined, or attempted to generate one of three cued forces with either a power grasp or a closed pincer grasp; to perform a wiggling finger movement; or to rest. Trial types were presented in a pseudorandom order. Each trial contained a preparatory (prep) phase, a go phase where forces were actively embodied, and a stop phase where neural activity was allowed to return to baseline. Participants were prompted with both audio and visual cues, in which a researcher squeezed an object associated with each force level. Visual cues were presented with a third person, frontal view, in which the researcher faced the participants while squeezing the objects. Lateral views are shown here for visual clarity, but were not displayed as such to the participants.
Figure 2Single features are tuned to force and volitional state. Rows: Average per-condition activity (PSTH) of five exemplary TC and SBP features tuned to force only (session 1), volitional state (VoS) only (session 4), neither factor (session 1), both factors (session 4), and an interaction between both factors (session 4) in participant T8 (2-way Welch ANOVA, corrected p < 0.05, Benjamini-Hochberg method). Neural activity was smoothed with a 100-ms Gaussian kernel prior to trial averaging to aid in visualization. Statistically significant p-values for force modulation, VoS modulation, and interaction are indicated with asterisks. Neural activity in Column 1 is averaged over all volitional states, such that observable differences in modulation are due to force alone (~50–90 trials per force level, depending on session number). Similarly, Column 2 depicts the activity of individual features during distinct volitional states, averaged over all force levels (~50–90 trials per volitional state, depending on session number). Simple main effects are represented graphically in Column 3 via normalized mean neural deviations from baseline activity during force trials within each of the three volitional states. Modulation depths were computed over the go phase of each trial, and then averaged within each force-VoS pair. Error bars indicate 95% confidence intervals.
Figure 3Overall Tuning of Neural Features. (A) Fraction of neural features significantly tuned (2-way Welch-ANOVA, corrected p < 0.05) to force and/or volitional state during the go phase of force production. For participant T8, results are averaged across multiple sessions. Error bars indicate standard deviation. (B) Fraction of total features exhibiting a statistically significant interaction (2-way Welch-ANOVA, p < 0.05) between force and volitional state, subdivided into force-tuned features during observation (O), imagination (I), and attempt (A). Force tuning within each volitional state was determined via one-way Welch-ANOVA (corrected p < 0.05). Error bars indicate standard deviation. Results show that features with an interaction between force and VoS are more likely to have force tuning in the attempt condition than in the observed or imagined conditions.
Figure 4Feature population activity patterns. (A) Two-dimensional CSIM plots for a representative session from each participant-grasp pair. Each point represents the activity of the entire population of simultaneously-extracted features during a single trial. The distance between points indicates the degree of similarity between single trials. Clustering of similar symbols denotes similarity between trials with the same intended force level, while clustering of similar colors indicates similarity of trials within the same volitional state. In all panels, the distribution of distances for pairs of trials within the same VoS displayed a significantly smaller median than distances between trials in different VoS categories (Kruskall-Wallis p < 0.00001). Analyzing pair-wise distances for trials within and between force conditions produced different results across sessions. Asterisks in the top left corner denote sessions with significantly smaller within-force than across-force distances (*p < 0.05 **p < 0.01, and ***p < 0.0001) within each VoS, as indicated by the color of the asterisks. (B) Distribution of pairwise distances within and between categories for VoS (upper left) and and observed, imagined, and attempted force. Distances were normalized and pooled across all sessions shown. Triangles on the X-axis denote medians for each distribution. Overall, VoS had a stronger effect on trial similarity than even the attempted force condition.
Figure 5Feature ensemble CSIM force and volitional state decoding accuracies as a function of window length. Offline decoding accuracies were computed using an LDA classifier implemented within a 10-dimensional CSIM representation of the neural feature data, using 10-fold cross-validation. 10-dimensional CSIM data of window lengths ranging from 100 ms to 3000 ms were passed to the LDA, as described in the Methods. Each window began at the start of the go phase and ended at the time point indicated on the x-axis. For participant T8, each panel shows session-averaged decoding performances from each participant-grasp pair. The T8 power and pincer panels were averaged over 5 and 3 sessions, respectively. Standard deviations across T8 sessions are indicated by the dotted lines. Gray line indicates the upper boundary of the 95% empirical confidence interval of the chance distribution, estimated using 10,000 random shuffles of the trial labels.
Figure 6Time-dependent feature ensemble CSIM force and volitional state decoding accuracies. Offline decoding accuracies were computed using an LDA classifier implemented within a 10-dimensional CSIM representation of the neural feature data, using 10-fold cross-validation. The LDA was applied to a 400 ms sliding window, stepped in 100 ms increments. Each panel shows decoding performance for a representative session from each participant-grasp pair, where time = 0 indicates the start of the active “go” phase of the trial. The gray line indicates the upper boundary of the 95% empirical confidence interval of the chance distribution, estimated using 10,000 random shuffles of the trial labels.
Figure 7Feature ensemble volitional state go-phase confusion matrices. Offline decoding accuracies were computed using an LDA classifier implemented within a 10-dimensional CSIM representation of the neural feature data, using 10-fold cross-validation, over a 400 ms sliding window stepped down in 100 ms increments. Classification accuracies for individual volitional states were averaged over all time points within the go phase of the trial, resulting in a confusion matrices of true vs. predicted (P) observed (O), imagined (I), and attempted (A) volitional states. Note that the attempted volitional state is classified with a high accuracy rate across all sessions, while observed trials are classified with high accuracy during sessions 1, 7, and 11.