| Literature DB >> 31964947 |
Marco A Ponce-Gallegos1, Gloria Pérez-Rubio1, Enrique Ambrocio-Ortiz1, Neftali Partida-Zavala1, Rafael Hernández-Zenteno2, Fernando Flores-Trujillo2, Leonor García-Gómez2, Andrea Hernández-Pérez2, Alejandra Ramírez-Venegas3, Ramcés Falfán-Valencia4.
Abstract
IL-17A is an important pro-inflammatory cytokine involved in the inflammatory response in chronic obstructive pulmonary disease (COPD). To evaluate the role played by single nucleotide polymorphisms of IL17A and protein levels in susceptibility to COPD, 1,807 subjects were included in a case-control study; 436 had COPD related to tobacco smoking (COPD-S) and 190 had COPD related to biomass burning (COPD-BB). Six hundred fifty-seven smokers without COPD (SWOC) and 183 biomass burning-exposed subjects (BBES) served as the respective control groups. The CC genotype and C allele of rs8193036 were associated with COPD (COPD-S vs. SWOC: p < 0.05; OR = 3.01, and OR = 1.28, respectively), as well as a recessive model (p < 0.01; OR = 2.91). Significant differences in serum levels were identified between COPD-S vs. SWOC, COPD-S vs. COPD-BB, and SWOC vs. BBES (p < 0.01). By comparing genotypes in the COPD-BB group TT vs. CC and TC vs. CC (p < 0.05), we found lower levels for the CC genotype. Logistic regression analysis by co-variables was performed, keeping the associations between COPD-S vs. SWOC with both polymorphisms evaluated (p < 0.05), as well as in COPD-BB vs. BBES but with a reduced risk of exacerbation (p < 0.05). In conclusion, polymorphisms in IL17A are associated with COPD. Serum levels of IL-17A were higher in smokers with and without COPD.Entities:
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Year: 2020 PMID: 31964947 PMCID: PMC6972744 DOI: 10.1038/s41598-020-57606-6
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Figure 1IL17A gene and characteristics of selected SNPs. MAF: minor allele frequency. MXL: Mexican from Los Angeles.
Demographic variables and pulmonary function data from all five groups.
| Variables | COPD-S (n = 439) | SWOC (n = 657) | COPD-BB (n = 190) | BBES (n = 183) | HS (n = 341) | ||
|---|---|---|---|---|---|---|---|
| Age, years | 67 (40–93) | 53 (38–90) | <0.01 | 73 (51–97 | 63 (41–85) | <0.01 | 55 (21–80) |
| Female (%) | 26.38 | 51.60 | <0.01 | 89.47 | 98.92 | <0.01 | 76.19 |
| Hours per day exposed | 7 (1–24) | 5 (1–12) | <0.01 | ||||
| Years exposed | 40 (3–82) | 46 (5–80) | 0.12 | ||||
| Biomass Exposure Index | 255 (36–960) | 272 (12–864) | 0.23 | ||||
| Years of smoking | 43 (10–73) | 31 (10–60) | <0.01 | ||||
| Cigarettes per day | 20 (3–80) | 20 (8–80) | 0.03 | ||||
| Packs-year history | 40 (5–200) | 27 (5–168) | <0.01 | ||||
| Onset of smoking | 16 (6–65) | 17 (5–49) | 0.98 | ||||
| FVC (%) post | 83 (18–151) | 95 (29–156) | <0.01 | 86 (57–131) | 101 (62–193) | <0.01 | |
| FEV1 (%) post | 54 (15–119) | 98 (37–160) | <0.01 | 61 (30–114) | 104 (60–187) | <0.01 | |
| FEV1/FVC (%) post | 54 (19–69) | 82 (70–113) | <0.01 | 55 (31–69) | 80 (71–121) | <0.01 | |
COPD-S: Patients with COPD related to tobacco smoking, SWOC: Smokers without COPD, COPD-BB: Patients with COPD related to biomass burning, BBES: Biomass burning-exposed subjects, HS: Healthy subjects.
All values are measures of pulmonary function post-bronchodilator use. A p-value < 0.05 was significant. We used the median test to make comparisons between groups and data are shown as the minimum and maximum values.
Demographic variables among COPD patients FE-S, NEX-S, FE-BB and NEX-BB.
| Variables | FE-S (n = 71) | NEX-S (n = 149) | FE-BB (n = 50) | NEX-BB (n = 85) | ||
|---|---|---|---|---|---|---|
| Age, years | 68 (51–93) | 67 (42–93) | 0.85 | 70 (58–90) | 76 (51–97) | 0.10 |
| Female (%) | 21.13 | 22.82 | 0.86 | 88.24 | 90.59 | 0.66 |
| Hours per day exposed | 6 (2–18) | 7 (1–24) | 0.54 | |||
| Years exposed | 40 (8–75) | 40 (7–80) | 0.89 | |||
| Biomass Exposure Index | 225 (60–800) | 205 (48–960) | 0.98 | |||
| Years of smoking | 45 (15–65) | 42 (10–64) | 0.36 | |||
| Cigarettes per day | 20 (4–80) | 20 (5–80) | 0.99 | |||
| Packs-year history | 40 (8–200) | 40 (5–200) | 0.19 | |||
| Onset of smoking | 15 (6–25) | 17 (7–60) | 0.01 | |||
| G1 (I - II) [%] | 31.15 | 65.71 | <0.01 | 70.59 | 68.67 | 0.88 |
| G2 (III - IV) [%] | 68.85 | 34.29 | 29.41 | 31.33 | ||
| FVC (%) post | 80 (42–139) | 86 (18–155) | 0.04 | 95 (57–178) | 87 (61–131) | 0.61 |
| FEV1 (%) post | 42 (18–108) | 57 (18–123) | <0.01 | 65 (34–130) | 65 (30–114) | 0.83 |
| FEV1/FVC (%) post | 44 (24–69) | 54 (19–69) | 0.01 | 56 (31–69) | 58 (36–69) | 0.90 |
FE-S = Patients with COPD related to tobacco smoking frequent exacerbators, NEX-S = Patients with COPD related to tobacco smoking non-exacerbators, FE-BB = Patients with COPD related to biomass burning frequent exacerbators, NEX-BB = Patients with COPD related to biomass burning non-exacerbators. G1 = GOLD I and GOLD II stages, G2 = GOLD III and GOLD IV stages. All values are measures of pulmonary function post-bronchodilator use. A p-value < 0.05 was significant. We used median and Mann-Whitney U tests to make comparisons between groups. Data are shown as the minimum and maximum values.
Analysis of the association of alleles and genotypes in co-dominant, dominant and recessive models.
| SNP/Model | COPD-S | SWOC | COPD-BB | BBES | HS | OR | 95% CI | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| n = 436 | F (%) | n = 657 | F (%) | n = 190 | F (%) | n = 183 | F (%) | n = 344 | F (%) | ||||
| Co-dominant | |||||||||||||
| GG | 275 | 63.07 | 423 | 64.38 | 133 | 70 | 134 | 73.22 | 243 | 71.3 | 1 | ||
| GA | 141 | 32.34 | 210 | 31.96 | 56 | 29.47 | 46 | 25.14 | 93 | 27.3 | <0.01† | 1.33 | 0.97–1.83 |
| AA | 20 | 4.59 | 24 | 3.65 | 1 | 0.53 | 3 | 1.64 | 5 | 1.47 | 3.53 | 1.30–9.56 | |
| Alleles | |||||||||||||
| G | 691 | 79.24 | 1056 | 80.37 | 322 | 84.74 | 314 | 85.79 | 579 | 84.90 | <0.01† | 1.47 | 1.12–1.92 |
| A | 181 | 20.76 | 258 | 19.63 | 58 | 15.26 | 52 | 14.21 | 103 | 15.10 | |||
| Dominant | |||||||||||||
| GG | 275 | 63.07 | 423 | 64.38 | 133 | 70 | 134 | 73.22 | 243 | 71.26 | 0.02† | 1.45 | 1.07–1.96 |
| GA + AA | 161 | 36.93 | 234 | 35.62 | 57 | 30 | 49 | 26.78 | 98 | 28.74 | |||
| Recessive | |||||||||||||
| GG + GA | 416 | 95.41 | 633 | 96.35 | 189 | 99.47 | 180 | 98.36 | 336 | 98.53 | 0.01† | 3.23 | 1.19–8.69 |
| AA | 20 | 4.59 | 24 | 3.65 | 1 | 0.53 | 3 | 1.64 | 5 | 1.47 | |||
| Co-dominant | |||||||||||||
| TT | 259 | 59.40 | 420 | 63.93 | 118 | 62.11 | 115 | 62.16 | 199 | 57.9 | 1 | ||
| TC | 151 | 34.63 | 223 | 33.94 | 67 | 35.26 | 63 | 34.05 | 125 | 36.3 | 0.02§ | 1.09 | 0.84–1.42 |
| CC | 26 | 5.96 | 14 | 2.13 | 5 | 2.63 | 7 | 3.78 | 20 | 5.81 | 3.01 | 1.54–5.87 | |
| Alleles | |||||||||||||
| T | 669 | 76.72 | 1063 | 80.90 | 303 | 79.74 | 293 | 79.19 | 523 | 76 | 0.02§ | 1.28 | 1.04–1.59 |
| C | 203 | 23.28 | 251 | 19.10 | 77 | 20.26 | 77 | 20.81 | 165 | 24 | |||
| Dominant | |||||||||||||
| TT | 259 | 59.40 | 420 | 63.93 | 118 | 62.11 | 115 | 62.16 | 199 | 57.85 | NS | ||
| TC + CC | 177 | 40.60 | 237 | 36.07 | 72 | 37.89 | 70 | 37.84 | 145 | 42.15 | |||
| Recessive | |||||||||||||
| TT + TC | 410 | 94.04 | 643 | 97.87 | 185 | 97.37 | 178 | 96.22 | 324 | 94.19 | <0.01§ | 2.91 | 1.50–5.64 |
| CC | 26 | 5.96 | 14 | 2.13 | 5 | 2.63 | 7 | 3.78 | 20 | 5.81 | |||
†When comparing COPD-S versus HS. §When comparing COPD-S versus SWOC. COPD-S: Patients with COPD related to tobacco smoking, SWOC: Smokers without COPD, COPD-BB: Patients with COPD related to biomass burning, BBES: Biomass burning-exposed subjects, HS: Healthy subjects, F: Frequency, NS: Nonsignificant.
Analysis of the association of alleles and genotypes in co-dominant, dominant and recessive models between frequent exacerbators and non-exacerbators.
| Gene/SNP | Model | Genotype/Allele | FE-S | NEX-S | p-value | OR | 95% CI | FE-BB | NEX-BB | p-value | OR | 95% CI | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| n = 71 | F (%) | n = 149 | F (%) | n = 50 | F (%) | n = 85 | F (%) | |||||||||
| rs2275913 | Co-dominant | GG | 40 | 56.34 | 97 | 65.10 | 1 | 37 | 74 | 56 | 65.88 | |||||
| GA | 28 | 39.44 | 47 | 31.54 | 0.24 | 1.44 | 0.79–2.62 | 13 | 26 | 29 | 34.12 | NA | ||||
| AA | 3 | 4.23 | 5 | 3.36 | 1.45 | 0.33–6.37 | 0 | 0 | 0 | 0 | ||||||
| Alleles | G | 108 | 72.97 | 241 | 80.87 | 0.07 | 1.56 | 0.98–2.48 | 87 | 87 | 141 | 82.94 | 0.49 | 0.72 | 0.36–1.45 | |
| A | 40 | 27.03 | 57 | 19.13 | 13 | 13 | 29 | 17.06 | ||||||||
| Dominant | GG | 40 | 56.34 | 97 | 65.10 | 0.24 | 1.44 | 0.81–2.57 | 37 | 74 | 56 | 65.88 | 0.34 | 0.67 | 0.31–1.47 | |
| GA + AA | 31 | 43.66 | 52 | 34.90 | 13 | 26 | 29 | 34.12 | ||||||||
| Recessive | GA + GG | 68 | 95.77 | 144 | 96.64 | 0.71 | 1.27 | 0.29–5.47 | 50 | 100 | 85 | 100 | NA | |||
| AA | 3 | 4.23 | 5 | 3.36 | 0 | 0 | 0 | 0 | ||||||||
| n = 51 | F (%) | n = 84 | F (%) | |||||||||||||
| rs8193036 | Co-dominant | TT | 44 | 61.97 | 95 | 63.76 | 1 | 25 | 49.02 | 55 | 65.48 | |||||
| TC | 22 | 30.99 | 45 | 30.20 | 0.75 | 1.05 | 0.56–1.96 | 26 | 50.98 | 27 | 32.14 | NA | ||||
| CC | 5 | 7.04 | 9 | 6.04 | 1.19 | 0.37–3.78 | 0 | 0 | 2 | 2.38 | ||||||
| Alleles | T | 110 | 75.86 | 325 | 78.86 | 0.47 | 1.18 | 0.74–1.90 | 76 | 74.51 | 137 | 81.55 | 0.22 | 1.51 | 0.83–2.73 | |
| C | 35 | 24.14 | 73 | 21.14 | 26 | 25.49 | 31 | 18.45 | ||||||||
| Dominant | TT | 44 | 61.97 | 95 | 63.76 | 0.88 | 1.07 | 0.60–1.93 | 25 | 49.02 | 55 | 65.48 | 0.07 | 1.9 | 0.96–4.01 | |
| TC + CC | 27 | 38.03 | 54 | 36.24 | 26 | 50.98 | 29 | 34.52 | ||||||||
| Recessive | TT + TC | 66 | 92.96 | 140 | 93.96 | 0.77 | 1.17 | 0.38–3.65 | 51 | 100 | 57 | 67.86 | NA | |||
| CC | 5 | 7.04 | 9 | 6.04 | 0 | 0 | 27 | 32.14 | ||||||||
COPD-S (FE) = Patients with COPD related to smoking frequent exacerbators, COPD-S (NEX) = Patients with COPD related to tobacco smoking non-exacerbators; NA: Not applicable due to null values (0).
Figure 2IL-17A serum levels in COPD groups and controls. COPD-S: COPD related to tobacco smoking; SWOC: smokers without COPD; COPD-BB: COPD related to biomass burning exposure; BBES: biomass burning-exposed subjects.
Figure 3IL-17A serum levels between genotypes of rs8193036 in the COPD-BB group; COPD-BB: COPD related to biomass burning exposure.