| Literature DB >> 31964459 |
Michael L Beeton1, Xu-Sheng Zhang2, Søren A Uldum3, Cécile Bébéar4, Roger Dumke5, Karolina Gullsby6, Margareta Ieven7, Katherine Loens7, Ran Nir-Paz8, Sabine Pereyre4, O Brad Spiller9, Victoria J Chalker2.
Abstract
BackgroundMycoplasma pneumoniae is a leading cause of community-acquired pneumonia, with large epidemics previously described to occur every 4 to 7 years.AimTo better understand the diagnostic methods used to detect M. pneumoniae; to better understand M. pneumoniae testing and surveillance in use; to identify epidemics; to determine detection number per age group, age demographics for positive detections, concurrence of epidemics and annual peaks across geographical areas; and to determine the effect of geographical location on the timing of epidemics.MethodsA questionnaire was sent in May 2016 to Mycoplasma experts with national or regional responsibility within the ESCMID Study Group for Mycoplasma and Chlamydia Infections in 17 countries across Europe and Israel, retrospectively requesting details on M. pneumoniae-positive samples from January 2011 to April 2016. The Moving Epidemic Method was used to determine epidemic periods and effect of country latitude across the countries for the five periods under investigation.ResultsRepresentatives from 12 countries provided data on M. pneumoniae infections, accounting for 95,666 positive samples. Two laboratories initiated routine macrolide resistance testing since 2013. Between 2011 and 2016, three epidemics were identified: 2011/12, 2014/15 and 2015/16. The distribution of patient ages for M. pneumoniae-positive samples showed three patterns. During epidemic years, an association between country latitude and calendar week when epidemic periods began was noted.ConclusionsAn association between epidemics and latitude was observed. Differences were noted in the age distribution of positive cases and detection methods used and practice. A lack of macrolide resistance monitoring was noted.Entities:
Keywords: Mycoplasma pneumoniae; diagnostics; epidemiology; surveillance
Mesh:
Substances:
Year: 2020 PMID: 31964459 PMCID: PMC6976882 DOI: 10.2807/1560-7917.ES.2020.25.2.1900112
Source DB: PubMed Journal: Euro Surveill ISSN: 1025-496X
Mycoplasma pneumoniae detection methods, percent of positive samples and macrolide resistance monitoring by country, 11 countries in Europe and Israel, 2011–2016
| Country | Nucleic acid amplification test | Culture | Serology | Total number of positive samples | Total number of negative samples | Percent of positive samples (%) | Macrolide resistance monitoring | |||
|---|---|---|---|---|---|---|---|---|---|---|
| Performed | Number of positive detections | Performed | Number of positive detections | Performed | Number of positive detections | |||||
| Belgium | Yes | 894 | Yes | 49 | Yes | 12,047 | 21,094a | ND | NA | Only monitored when samples test positive at the NRC. No testing in sentinel laboratories. |
| Denmark | Yes | 20,081 | No | NA | No | NA | 20,081 | 264,770 | 7.0 | No routine surveillance system in place. In 2010/11, 2011/12 and 2015/16, 809 samples were examined identifying 13 macrolide resistance-associated mutations (1.5%). Samples are investigated upon physician request. |
| France | Yes | 92 | Yes | 53b | Yes | 298 | 390 | 7,463 | 5.0 | Performed on all clinical specimens detected as |
| Germany | Yes | 127 | No | NA | Yes | 316 | 443 | 10,143 | 4.2 | No comment |
| Greece | No | NA | No | NA | Yes | 140 | 140 | 1,498 | 8.5 | Information not provided |
| Hungary | Yes | 17 | No | NA | Yes | 1,117 | 1,134 | 6,109 | 15.7 | Information not provided |
| Ireland | No | NA | No | NA | Yes | 535 | 535 | 2,853 | 15.8 | Information not provided |
| Israel | Yes | 848 | No | NA | No | NA | 848 | 5,309 | 13.8 | No active monitoring. |
| Norway | Yes | 13,980 | No | NA | Yes | 10,678 | 24,658 | ND | NA | Information not provided |
| Slovenia | Yes | 1,172 | Yes | 827 | No | NA | 1,172 | 8,872 | 11.7 | Only upon physician request |
| Sweden | Yes | 9,499 | No | NA | Yes | 10,024 | 19,523 | 169,501 | 10.3 | No active monitoring. |
| United Kingdom (excluding Northern Ireland) | Yes | 385 | No | NA | Yes | 5,263 | 5,648 | ND | NA | No national system. All positive samples referred to PHE are tested. |
NA: not applicable; NAAT: Nucleic acid amplification test; ND: no data available; NRC: National Reference Centre; PHE: Public Health England.
a Method of detection not known for sentinel laboratories.
b Not included in the overall total for the purpose of de-duplication as these 53 samples were already listed in NAAT or serological counts.
Responses were received to state M. pneumoniae testing and surveillance is not in place on a national scale or case data were not available within the timespan of the survey from European Society of Clinical Microbiology and Infectious Diseases (ESCMID) Study Group for Mycoplasma Infections (ESGMI) members from Cyprus, Malta, the Netherlands, Poland, Slovakia or Spain.
Figure 1Four weekly moving average data on Mycoplasma pneumoniae infections by detection methods, 11 countries in Europe and Israel, 2011–2016
Figure 2Analysis of Mycoplasma pneumoniae epidemic periods using the Moving Epidemic Method, 11 countries in Europe and Israel, 2011–2016
Proportion of total samples positive for Mycoplasma pneumoniae during the pre-epidemic, epidemic and post-epidemic periods, 8 countries in Europe and Israel, epidemic periods 2011/12, 2014/15 and 2015/16a
| Country | 2011/12 | 2014/15 | 2015/16 | |||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Pre-epidemic | Epidemic | Post-epidemic | Total across all periods | Detection per peak week during epidemic period | Pre-epidemic | Epidemic | Post-epidemic | Total across all periods | Detection per peak week during epidemic period | Pre-epidemic | Epidemic | Post-epidemic | Total across all periods | Detection per peak week during epidemic period | ||||||||||||||||
| n/N | % | n/N | % | n/N | % | n/N | % | n/N | % | n/N | % | n/N | % | n/N | % | n/N | % | n/N | % | n/N | % | n/N | % | n/N | % | n/N | % | n/N | % | |
| Denmark | 920/7,784 | 12 | 6,932/47,522 | 15 | 804/15760 | 5 | 8,656/71,066 | 12 | 185/879 | 21 | 291/12,171 | 2 | 1,206/23,252 | 5 | 204/7,876 | 3 | 1,701/43,299 | 4 | 90/1238 | 7 | 1,120/18,340 | 6 | 5,751/52,827 | 11 | 712/16,139 | 4 | 7,583/87,306 | 9 | 546/3, 457 | 16 |
| France | 71/862 | 8 | 41/410 | 10 | 27/583 | 5 | 139/1,855 | 7 | 7/37 | 19 | 32/786 | 4 | 17/208 | 8 | 19/381 | 5 | 68/1,375 | 5 | 6/44 | 14 | 28/690 | 4 | 8/86 | 9 | 22/506 | 4 | 58/1,282 | 5 | 4/29 | 14 |
| Germany | 38/833 | 5 | 33/360 | 9 | 37/669 | 6 | 108/1,862 | 6 | 7/44 | 16 | 8/447 | 2 | 77/1,373 | 6 | 4/248 | 2 | 89/2,068 | 4 | 7/39 | 18 | 22/917 | 2 | 13/293 | 4 | 19/1,639 | 1 | 54/2,849 | 2 | 4/46 | 9 |
| Greece | NA | NA | 18/110 | 16 | 16/224 | 7 | 34/334 | 10 | 5/8 | 63 | NA | NA | 9/27 | 33 | 28/304 | 9 | 37/331 | 11 | 3/6 | 50 | 0/15 | 0 | 2/11 | 18 | 6/179 | 3 | 8/205 | 2 | 2/3 | 67 |
| Hungary | 15/154 | 10 | 32/169 | 19 | 105/942 | 11 | 152/1,265 | 12 | 7/20 | 35 | 75/442 | 17 | 186/760 | 24 | 54/367 | 15 | 315/1,569 | 20 | 5/12 | 42 | 96/570 | 17 | 50/220 | 23 | 59/544 | 11 | 205/1,334 | 15 | 10/30 | 33 |
| Ireland | 53/290 | 18 | 77/261 | 30 | 15/78 | 19 | 145/629 | 23 | 3/6 | 50 | 28/263 | 11 | 31/153 | 20 | 17/144 | 12 | 76/560 | 14 | 4/10 | 40 | 66/374 | 18 | 39/153 | 25 | 17/73 | 23 | 122/600 | 20 | 8/12 | 67 |
| Israel | 84/572 | 15 | 81/346 | 23 | NA | NA | 165/918 | 18 | 19/55 | 35 | 57/499 | 11 | 87/597 | 15 | NA | NA | 144/1,096 | 13 | 5/17 | 29 | 106/1052 | 10 | 82/687 | 12 | 3/36 | 8 | 191/1,775 | 11 | 11/45 | 24 |
| Slovenia | 32/389 | 8 | 31/349 | 9 | 12/413 | 3 | 75/1,151 | 7 | 4/18 | 22 | 166/775 | 21 | 583/1,866 | 31 | 83/1,037 | 8 | 832/3,678 | 23 | 38/78 | 49 | NA | NA | 29/469 | 6 | 28/1,447 | 2 | 57/1,916 | 3 | 5/27 | 19 |
| Sweden | 1,389/7,389 | 19 | 5,356/28,226 | 19 | 859/10,034 | 9 | 7,604/45,649 | 17 | 186/686 | 27 | 863/10,734 | 8 | 1,447/17,242 | 8 | 501/8,729 | 6 | 2,811/36,705 | 8 | 100/950 | 11 | 500/7,955 | 6 | 1,356/12,414 | 11 | 967/14,066 | 7 | 2,823/34,435 | 8 | 98/731 | 13 |
NA: not applicable.
a Only those countries reporting both positive and negative sample data are included.
Figure 3Number of Mycoplasma pneumoniae detections by age group, 10 countries in Europea and Israel, 2011–2016 (n = 70,191)
Figure 4Correlation between country latitude and epidemic week for Mycoplasma pneumoniae infections, 7 European countries and Israel, epidemic periods 2011/12, 2014/15 and 2015/16