| Literature DB >> 22897919 |
Tomás Vega1, Jose Eugenio Lozano, Tamara Meerhoff, René Snacken, Joshua Mott, Raul Ortiz de Lejarazu, Baltazar Nunes.
Abstract
BACKGROUND: Timely influenza surveillance is important to monitor influenza epidemics.Entities:
Mesh:
Year: 2012 PMID: 22897919 PMCID: PMC5855152 DOI: 10.1111/j.1750-2659.2012.00422.x
Source DB: PubMed Journal: Influenza Other Respir Viruses ISSN: 1750-2640 Impact factor: 4.380
Characteristics of data sets by country
| Region | Seasons | Numerator | System | Nature | Denominator | Units | Average |
|---|---|---|---|---|---|---|---|
| Influenza‐like illness data | |||||||
| Belgium | 10 | ILI | Sentinel | Voluntary | Population* | ×100 000 | – |
| Castilla y Leon (Spain) | 14 | ILI | Sentinel | Voluntary | Population | ×100 000 | 40 000 |
| Greece | 6 | ILI | Sentinel | Voluntary | Consultations | ×10 000 | 6000–20 000** |
| Hungary | 7 | ILI | Sentinel | Compulsory | Population | ×100 000 | 2000 000 |
| Ireland | 10 | ILI | Sentinel | Voluntary | Population | ×100 000 | 263 235 |
| Israel | 12 | ILI | Sentinel | Voluntary | Population | ×100 000 | 1 900 000 |
| Kyrgyzstan | 5 | ILI | Nationwide | Compulsory | Population | ×100 000 | 5 383 27 |
| Norway | 6 | ILI | Sentinel | Compulsory | Population | ×100 000 | 600 000–700 000 |
| Poland | 9 | ILI | Sentinel | Voluntary | Population | ×100 000 | 1 50 000 |
| Portugal | 12 | ILI | Sentinel | Voluntary | Population | ×100 000 | 56 000 |
| Romania | 5 | ILI | Sentinel | Compulsory | Population | ×100 000 | 600 000 |
| Slovenia | 10 | ILI | Sentinel | Voluntary | Population | ×100 000 | 75 000 |
| Spain | 14 | ILI | Sentinel | Voluntary | Population | ×100 000 | 813 371 |
| Switzerland | 9 | ILI | Sentinel | Voluntary | Population* | ×100 000 | – |
| The Netherlands | 15 | ILI | Sentinel | Voluntary | Population | ×100 000 | 116 000 |
| Acute respiratory infection data | |||||||
| Albania | 7 | ARI | Nationwide | Compulsory | Population | ×100 000 | 3 161 337 |
| Kazakhstan | 5 | ARI | Sentinel/Nationwide | Compulsory | Population | ×100 000 | 16 776 539 |
| Romania | 5 | ARI | Sentinel | Compulsory | Population | ×100 000 | 600 000 |
| Russian Federation | 6 | ARI | Nationwide | Compulsory | Population | ×100 000 | 44 267 62 |
| Ukraine | 7 | ARI | Clustering*** | Compulsory | Population | ×100 000 | 98 892 550 |
*Population is estimated from the number of consultations per week. GPs have not a fixed patient list.
**Average number of consultations per week.
***Compulsory system within a sample of cities of the country.
Pre‐epidemic and post‐epidemic thresholds based on historical data until 2008‐2009, and comparison with the observed 2009–2010 season
| Region | Pre‐threshold ( | Post‐threshold ( | Length of epidemic2009–2010 (weeks) | False alerts 2009–2010 ( | Detection lag 2009–2010 (weeks) | Timeliness2009–2010 |
|---|---|---|---|---|---|---|
| Influenza‐like illness data | ||||||
| Belgium | 143 | 145 | 10 | 0 | 0 | 0 |
| Castilla y Leon | 71 | 98 | 12 | 0 | 0 | 0 |
| Greece | 149 | 152 | 10 | 4 | 0 | 5 |
| Hungar y | 150 | 92 | 12 | 0 | 0 | 0 |
| Ireland | 25 | 23 | 12 | 8 | 0 | 8 |
| Israel | 42 | 47 | 9 | 11 | 0 | 12 |
| Kyrgyzstan | 73 | 65 | 6 | 0 | 0 | 0 |
| Norway | 55 | 56 | 7 | 13 | 0 | 13 |
| Poland | 113 | 69 | 8 | 0 | 0 | 0 |
| Portugal | 25 | 24 | 10 | 1 | 0 | 6 |
| Romania | 168 | 125 | 12 | 2 | 0 | 4 |
| Slovenia | 27 | 32 | 7 | 0 | 0 | 0 |
| Spain | 79 | 72 | 10 | 0 | 0 | 0 |
| Switzerland | 69 | 73 | 9 | 0 | 0 | 0 |
| The Netherlands | 63 | 56 | 10 | 0 | 0 | 0 |
| Acute respiratory infection data | ||||||
| Albania | 457 | 402 | 18 | 0 | 2 | 2 |
| Kazakhstan | 189 | 168 | 9 | 0 | 0 | 0 |
| Romania | 762 | 774 | 8 | 3 | 0 | 4 |
| Russian Federation | 618 | 630 | 7 | 1 | 0 | 1 |
| Ukraine | 573 | 537 | 4 | 4 | 0 | 6 |
Figure 1Epidemic threshold, levels of intensity and modelled influenza‐like illness season 2009–2010 by country.
Figure 2Epidemic threshold, levels of intensity and modelled acute respiratory infection season 2009–2010 by country.
Figure 3Time series of influenza‐like illness by country, the epidemic periods modelled by MEM, and the alert week according with the pre‐epidemic threshold of each season.
Figure 4Time series of acute respiratory infection by country and the epidemic periods modelled by MEM, and the alert week according with the pre‐epidemic threshold of each season.
Indicators of the model performance to detect the beginning of an epidemic period
| Region | Sensitivity (%) | Specificity (%) | PPV (%)* | NPV (%)** | Median timeliness |
|---|---|---|---|---|---|
| All data | 71·8 | 95·5 | 91·3 | 88·6 | 1 |
| Influenza‐like Illness data | 75·7 | 96·0 | 92·4 | 90·4 | 1 |
| Belgium | 94·6 | 98·7 | 97·3 | 97·3 | 0 |
| Castilla y Leon | 77·3 | 98·4 | 96·4 | 91·5 | 0 |
| Greece | 85·5 | 93·6 | 90·6 | 95·2 | 0·5 |
| Hungary | 76·8 | 93·5 | 92·9 | 88·7 | 1 |
| Ireland | 55·4 | 96·1 | 93·9 | 83·8 | 2 |
| Israel | 72·6 | 96·4 | 93·9 | 88·1 | 1 |
| Kyrgyzstan | 80·0 | 92·0 | 81·5 | 88·1 | 1 |
| Norway | 59·6 | 91·4 | 88·4 | 81·7 | 4·5 |
| Poland | 68·4 | 94·2 | 88·9 | 90·3 | 1·5 |
| Portugal | 69·7 | 97·7 | 93·5 | 85·3 | 0 |
| Romania | 74·1 | 95·1 | 87·5 | 91·6 | 2 |
| Slovenia | 83·1 | 98·8 | 95·1 | 95·8 | 0·5 |
| Spain | 77·5 | 98·3 | 95·9 | 90·5 | 1 |
| Switzerland | 92·3 | 97·1 | 93·1 | 97·3 | 0 |
| The Netherlands | 68·2 | 98·6 | 96·7 | 90·8 | 2 |
| Acute Respiratory Infection data | 60·1 | 94·1 | 88·2 | 83·3 | 2 |
| Albania | 50·0 | 94·8 | 90·0 | 69·3 | 4 |
| Kazakhstan | 72·5 | 89·6 | 83·8 | 80·2 | 1 |
| Romania | 51·3 | 95·0 | 89·4 | 86·5 | 2 |
| Russian Federation | 76·6 | 95·6 | 90·2 | 95·0 | 1 |
| Ukraine | 50·2 | 95·7 | 87·7 | 85.3 | 2 |
*Positive predictive value.
**Negative predictive value.