Literature DB >> 3194198

Human 28S ribosomal RNA sequence heterogeneity.

I L Gonzalez1, J E Sylvester, R D Schmickel.   

Abstract

DNA sequencing of several cloned human 28S ribosomal RNA gene fragments has revealed sequence heterogeneity (1) but it was not clear whether these are inactive pseudogenes or are active genes that are transcribed and represented in ribosomes. S1 nuclease analysis allowed us to examine the population of ribosomal RNA molecules of a cell, and we found that 28S rRNA is a heterogeneous assortment of molecules in both mono- and polysomal preparations. Sequence variation, although largely concentrated in variable regions of the molecule, apparently also occurs in the conserved regions.

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Year:  1988        PMID: 3194198      PMCID: PMC338847          DOI: 10.1093/nar/16.21.10213

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  18 in total

1.  Paired sequence difference in ribosomal RNAs: evolutionary and phylogenetic implications.

Authors:  W C Wheeler; R L Honeycutt
Journal:  Mol Biol Evol       Date:  1988-01       Impact factor: 16.240

2.  Variation among human 28S ribosomal RNA genes.

Authors:  I L Gonzalez; J L Gorski; T J Campen; D J Dorney; J M Erickson; J E Sylvester; R D Schmickel
Journal:  Proc Natl Acad Sci U S A       Date:  1985-11       Impact factor: 11.205

3.  Complementarity between ferritin H mRNA and 28 S ribosomal RNA.

Authors:  S K Jain; J Crampton; I L Gonzalez; R D Schmickel; J W Drysdale
Journal:  Biochem Biophys Res Commun       Date:  1985-09-16       Impact factor: 3.575

4.  The complete nucleotide sequence of mouse 28S rRNA gene. Implications for the process of size increase of the large subunit rRNA in higher eukaryotes.

Authors:  N Hassouna; B Michot; J P Bachellerie
Journal:  Nucleic Acids Res       Date:  1984-04-25       Impact factor: 16.971

5.  Rate of turnover of structural variants in the rDNA gene family of Drosophila melanogaster.

Authors:  E S Coen; J M Thoday; G Dover
Journal:  Nature       Date:  1982-02-18       Impact factor: 49.962

6.  Unequal mitotic sister chromatid exchange and disproportionate replication as mechanisms regulating ribosomal RNA gene redundancy.

Authors:  K D Tartof
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1974

7.  A history of the human fetal globin gene duplication.

Authors:  S H Shen; J L Slightom; O Smithies
Journal:  Cell       Date:  1981-10       Impact factor: 41.582

8.  Homology and concerted evolution at the alpha 1 and alpha 2 loci of human alpha-globin.

Authors:  S A Liebhaber; M Goossens; Y W Kan
Journal:  Nature       Date:  1981-03-05       Impact factor: 49.962

9.  A "bulged" double helix in a RNA-protein contact site.

Authors:  D A Peattie; S Douthwaite; R A Garrett; H F Noller
Journal:  Proc Natl Acad Sci U S A       Date:  1981-12       Impact factor: 11.205

10.  Molecular evidence for genetic exchanges among ribosomal genes on nonhomologous chromosomes in man and apes.

Authors:  N Arnheim; M Krystal; R Schmickel; G Wilson; O Ryder; E Zimmer
Journal:  Proc Natl Acad Sci U S A       Date:  1980-12       Impact factor: 11.205

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  19 in total

Review 1.  The ribosome filter hypothesis.

Authors:  Vincent P Mauro; Gerald M Edelman
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-09       Impact factor: 11.205

2.  Retroposons do jump: a B2 element recently integrated in an 18S rDNA gene.

Authors:  I Oberbäumer
Journal:  Nucleic Acids Res       Date:  1992-02-25       Impact factor: 16.971

3.  Secondary structure of two regions in expansion segments ES3 and ES6 with the potential of forming a tertiary interaction in eukaryotic 40S ribosomal subunits.

Authors:  Gunnar Alkemar; Odd Nygård
Journal:  RNA       Date:  2004-03       Impact factor: 4.942

4.  'Compensatory slippage' in the evolution of ribosomal RNA genes.

Authors:  J M Hancock; G A Dover
Journal:  Nucleic Acids Res       Date:  1990-10-25       Impact factor: 16.971

5.  Concerted evolution of the tandemly repeated genes encoding human U2 snRNA (the RNU2 locus) involves rapid intrachromosomal homogenization and rare interchromosomal gene conversion.

Authors:  D Liao; T Pavelitz; J R Kidd; K K Kidd; A M Weiner
Journal:  EMBO J       Date:  1997-02-03       Impact factor: 11.598

6.  The sequence of 28S ribosomal RNA varies within and between human cell lines.

Authors:  H Leffers; A H Andersen
Journal:  Nucleic Acids Res       Date:  1993-03-25       Impact factor: 16.971

7.  Restriction site patterns in the ribosomal DNA of camelidae.

Authors:  L C Semorile; J V Crisci; L Vidal-Rioja
Journal:  Genetica       Date:  1994       Impact factor: 1.082

8.  Human ribosomal RNA variants from a single individual and their expression in different tissues.

Authors:  B A Kuo; I L Gonzalez; D A Gillespie; J E Sylvester
Journal:  Nucleic Acids Res       Date:  1996-12-01       Impact factor: 16.971

9.  Petri dish PCR: laser-heated reactions in nanoliter droplet arrays.

Authors:  Hanyoup Kim; Siarhei Vishniakou; Gregory W Faris
Journal:  Lab Chip       Date:  2009-01-19       Impact factor: 6.799

10.  Protein kinase C beta expression in melanoma cells and melanocytes: differential expression correlates with biological responses to 12-O-tetradecanoylphorbol 13-acetate.

Authors:  M B Powell; R K Rosenberg; M J Graham; M L Birch; D T Yamanishi; J A Buckmeier; F L Meyskens
Journal:  J Cancer Res Clin Oncol       Date:  1993       Impact factor: 4.553

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