Literature DB >> 31934325

Automatic Histogram Specification for Glioma Grading Using Multicenter Data.

Xi Chen1,2, Yaping Wu3, Guohua Zhao2, Meiyun Wang3, Wenyi Gao2, Qian Zhang4, Yusong Lin1,2.   

Abstract

Multicenter sharing is an effective method to increase the data size for glioma research, but the data inconsistency among different institutions hindered the efficiency. This paper proposes a histogram specification with automatic selection of reference frames for magnetic resonance images to alleviate this problem (HSASR). The selection of reference frames is automatically performed by an optimized grid search strategy with coarse and fine search. The search range is firstly narrowed by coarse search of intraglioma samples, and then the suitable reference frame in histogram is selected by fine search within the sample selected by coarse search. Validation experiments are conducted on two datasets GliomaHPPH2018 and BraTS2017 to perform glioma grading. The results demonstrate the high performance of the proposed method. On the mixed dataset, the average AUC, accuracy, sensitivity, and specificity are 0.9786, 94.13%, 94.64%, and 93.00%, respectively. It is about 15% higher on all indicators compared with those without HSASR and has a slight advantage over the result of a manually selected reference frame by radiologists. Results show that our methods can effectively alleviate multicenter data inconsistencies and lift the performance of the prediction model.
Copyright © 2019 Xi Chen et al.

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Year:  2019        PMID: 31934325      PMCID: PMC6942805          DOI: 10.1155/2019/9414937

Source DB:  PubMed          Journal:  J Healthc Eng        ISSN: 2040-2295            Impact factor:   2.682


  14 in total

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4.  Radiomics of CT Features May Be Nonreproducible and Redundant: Influence of CT Acquisition Parameters.

Authors:  Roberto Berenguer; María Del Rosario Pastor-Juan; Jesús Canales-Vázquez; Miguel Castro-García; María Victoria Villas; Francisco Mansilla Legorburo; Sebastià Sabater
Journal:  Radiology       Date:  2018-04-24       Impact factor: 11.105

5.  Advancing The Cancer Genome Atlas glioma MRI collections with expert segmentation labels and radiomic features.

Authors:  Spyridon Bakas; Hamed Akbari; Aristeidis Sotiras; Michel Bilello; Martin Rozycki; Justin S Kirby; John B Freymann; Keyvan Farahani; Christos Davatzikos
Journal:  Sci Data       Date:  2017-09-05       Impact factor: 6.444

Review 6.  Radiomics: the process and the challenges.

Authors:  Virendra Kumar; Yuhua Gu; Satrajit Basu; Anders Berglund; Steven A Eschrich; Matthew B Schabath; Kenneth Forster; Hugo J W L Aerts; Andre Dekker; David Fenstermacher; Dmitry B Goldgof; Lawrence O Hall; Philippe Lambin; Yoganand Balagurunathan; Robert A Gatenby; Robert J Gillies
Journal:  Magn Reson Imaging       Date:  2012-08-13       Impact factor: 2.546

7.  New variants of a method of MRI scale standardization.

Authors:  L G Nyúl; J K Udupa; X Zhang
Journal:  IEEE Trans Med Imaging       Date:  2000-02       Impact factor: 10.048

8.  Image Enhancement via Subimage Histogram Equalization Based on Mean and Variance.

Authors:  Liyun Zhuang; Yepeng Guan
Journal:  Comput Intell Neurosci       Date:  2017-12-18

9.  Clinical application value of 3.0T MR diffusion tensor imaging in grade diagnosis of gliomas.

Authors:  Wei Shan; Xing-Long Wang
Journal:  Oncol Lett       Date:  2017-06-13       Impact factor: 2.967

Review 10.  The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS).

Authors:  Bjoern H Menze; Andras Jakab; Stefan Bauer; Jayashree Kalpathy-Cramer; Keyvan Farahani; Justin Kirby; Yuliya Burren; Nicole Porz; Johannes Slotboom; Roland Wiest; Levente Lanczi; Elizabeth Gerstner; Marc-André Weber; Tal Arbel; Brian B Avants; Nicholas Ayache; Patricia Buendia; D Louis Collins; Nicolas Cordier; Jason J Corso; Antonio Criminisi; Tilak Das; Hervé Delingette; Çağatay Demiralp; Christopher R Durst; Michel Dojat; Senan Doyle; Joana Festa; Florence Forbes; Ezequiel Geremia; Ben Glocker; Polina Golland; Xiaotao Guo; Andac Hamamci; Khan M Iftekharuddin; Raj Jena; Nigel M John; Ender Konukoglu; Danial Lashkari; José Antonió Mariz; Raphael Meier; Sérgio Pereira; Doina Precup; Stephen J Price; Tammy Riklin Raviv; Syed M S Reza; Michael Ryan; Duygu Sarikaya; Lawrence Schwartz; Hoo-Chang Shin; Jamie Shotton; Carlos A Silva; Nuno Sousa; Nagesh K Subbanna; Gabor Szekely; Thomas J Taylor; Owen M Thomas; Nicholas J Tustison; Gozde Unal; Flor Vasseur; Max Wintermark; Dong Hye Ye; Liang Zhao; Binsheng Zhao; Darko Zikic; Marcel Prastawa; Mauricio Reyes; Koen Van Leemput
Journal:  IEEE Trans Med Imaging       Date:  2014-12-04       Impact factor: 10.048

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  1 in total

1.  Intensity standardization of MRI prior to radiomic feature extraction for artificial intelligence research in glioma-a systematic review.

Authors:  Kavi Fatania; Farah Mohamud; Anna Clark; Michael Nix; Susan C Short; James O'Connor; Andrew F Scarsbrook; Stuart Currie
Journal:  Eur Radiol       Date:  2022-04-29       Impact factor: 7.034

  1 in total

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