Literature DB >> 31933254

Artificial Intelligence Within Pharmacovigilance: A Means to Identify Cognitive Services and the Framework for Their Validation.

Ruta Mockute1, Sameen Desai2, Sujan Perera3, Bruno Assuncao2, Karolina Danysz4, Niki Tetarenko2, Darpan Gaddam2, Danielle Abatemarco2, Mark Widdowson5, Sheryl Beauchamp2, Salvatore Cicirello4, Edward Mingle2.   

Abstract

INTRODUCTION: Pharmacovigilance (PV) detects, assesses, and prevents adverse events (AEs) and other drug-related problems by collecting, evaluating, and acting upon AEs. The volume of individual case safety reports (ICSRs) increases yearly, but it is estimated that more than 90% of AEs go unreported. In this landscape, embracing assistive technologies at scale becomes necessary to obtain a higher yield of AEs, to maintain compliance, and transform the PV professional work life. AIM: The aim of this study was to identify areas across the PV value chain that can be augmented by cognitive service solutions using the methodologies of contextual analysis and cognitive load theory. It will also provide a framework of how to validate these PV cognitive services leveraging the acceptable quality limit approach.
METHODS: The data used to train the cognitive service were an annotated corpus consisting of 20,000 ICSRS from which we developed a framework to identify and validate 40 cognitive services ranging from information extraction to complex decision making. This framework addresses the following shortcomings: (1) needing subject-matter expertise (SME) to match the artificial intelligence (AI) model predictions to the gold standard, commonly referred to as 'ground truth' in the AI space, (2) ground truth inconsistencies, (3) automated validation of prediction missing context, and (4) auto-labeling causing inaccurate test accuracy. The method consists of (1) conducting contextual analysis, (2) assessing human cognitive workload, (3) determining decision points for applying artificial intelligence (AI), (4) defining the scope of the data, or annotated corpus required for training and validation of the cognitive services, (5) identifying and standardizing PV knowledge elements, (6) developing cognitive services, and (7) reviewing and validating cognitive services.
RESULTS: By applying the framework, we (1) identified 51 decision points as candidates for AI use, (2) standardized the process to make PV knowledge explicit, (3) embedded SMEs in the process to preserve PV knowledge and context, (4) standardized acceptability by using established quality inspection principles, and (5) validated a total of 126 cognitive services.
CONCLUSION: The value of using AI methodologies in PV is compelling; however, as PV is highly regulated, acceptability will require assurances of quality, consistency, and standardization. We are proposing a foundational framework that the industry can use to identify and validate services to better support the gathering of quality data and to better serve the PV professional.

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Year:  2019        PMID: 31933254     DOI: 10.1007/s40290-019-00269-0

Source DB:  PubMed          Journal:  Pharmaceut Med        ISSN: 1178-2595


  8 in total

Review 1.  Utilizing social media data for pharmacovigilance: A review.

Authors:  Abeed Sarker; Rachel Ginn; Azadeh Nikfarjam; Karen O'Connor; Karen Smith; Swetha Jayaraman; Tejaswi Upadhaya; Graciela Gonzalez
Journal:  J Biomed Inform       Date:  2015-02-23       Impact factor: 6.317

2.  Active computerized pharmacovigilance using natural language processing, statistics, and electronic health records: a feasibility study.

Authors:  Xiaoyan Wang; George Hripcsak; Marianthi Markatou; Carol Friedman
Journal:  J Am Med Inform Assoc       Date:  2009-03-04       Impact factor: 4.497

3.  Serious adverse drug events reported to the Food and Drug Administration, 1998-2005.

Authors:  Thomas J Moore; Michael R Cohen; Curt D Furberg
Journal:  Arch Intern Med       Date:  2007-09-10

Review 4.  Natural Language Processing for EHR-Based Pharmacovigilance: A Structured Review.

Authors:  Yuan Luo; William K Thompson; Timothy M Herr; Zexian Zeng; Mark A Berendsen; Siddhartha R Jonnalagadda; Matthew B Carson; Justin Starren
Journal:  Drug Saf       Date:  2017-11       Impact factor: 5.606

Review 5.  Pharmacovigilance and Biomedical Informatics: A Model for Future Development.

Authors:  Paul Beninger; Michael A Ibara
Journal:  Clin Ther       Date:  2016-11-29       Impact factor: 3.393

Review 6.  A Biopharmaceutical Industry Perspective on the Control of Visible Particles in Biotechnology-Derived Injectable Drug Products.

Authors:  Serge Mathonet; Hanns-Christian Mahler; Stefan T Esswein; Maryam Mazaheri; Patricia W Cash; Klaus Wuchner; Georg Kallmeyer; Tapan K Das; Christof Finkler; Andrew Lennard
Journal:  PDA J Pharm Sci Technol       Date:  2016-04-18

7.  Training Augmented Intelligent Capabilities for Pharmacovigilance: Applying Deep-learning Approaches to Individual Case Safety Report Processing.

Authors:  Danielle Abatemarco; Sujan Perera; Sheng Hua Bao; Sameen Desai; Bruno Assuncao; Niki Tetarenko; Karolina Danysz; Ruta Mockute; Mark Widdowson; Nicole Fornarotto; Sheryl Beauchamp; Salvatore Cicirello; Edward Mingle
Journal:  Pharmaceut Med       Date:  2018-10-13

8.  Assessment of the Utility of Social Media for Broad-Ranging Statistical Signal Detection in Pharmacovigilance: Results from the WEB-RADR Project.

Authors:  Ola Caster; Juergen Dietrich; Marie-Laure Kürzinger; Magnus Lerch; Simon Maskell; G Niklas Norén; Stéphanie Tcherny-Lessenot; Benoit Vroman; Antoni Wisniewski; John van Stekelenborg
Journal:  Drug Saf       Date:  2018-12       Impact factor: 5.606

  8 in total
  9 in total

1.  Adverse Drug Reaction Case Safety Practices in Large Biopharmaceutical Organizations from 2007 to 2017: An Industry Survey.

Authors:  Stella Stergiopoulos; Mortiz Fehrle; Patrick Caubel; Louise Tan; Louise Jebson
Journal:  Pharmaceut Med       Date:  2019-12

2.  The Use of Artificial Intelligence in Pharmacovigilance: A Systematic Review of the Literature.

Authors:  Maribel Salas; Jan Petracek; Priyanka Yalamanchili; Omar Aimer; Dinesh Kasthuril; Sameer Dhingra; Toluwalope Junaid; Tina Bostic
Journal:  Pharmaceut Med       Date:  2022-07-29

3.  Industry Perspective on Artificial Intelligence/Machine Learning in Pharmacovigilance.

Authors:  Raymond Kassekert; Neal Grabowski; Denny Lorenz; Claudia Schaffer; Dieter Kempf; Promit Roy; Oeystein Kjoersvik; Griselda Saldana; Sarah ElShal
Journal:  Drug Saf       Date:  2022-05-17       Impact factor: 5.228

Review 4.  Artificial Intelligence-Based Pharmacovigilance in the Setting of Limited Resources.

Authors:  Likeng Liang; Jifa Hu; Gang Sun; Na Hong; Ge Wu; Yuejun He; Yong Li; Tianyong Hao; Li Liu; Mengchun Gong
Journal:  Drug Saf       Date:  2022-05-17       Impact factor: 5.228

5.  Artificial intelligence in pharmacovigilance: Practical utility.

Authors:  Kotni Murali; Sukhmeet Kaur; Ajay Prakash; Bikash Medhi
Journal:  Indian J Pharmacol       Date:  2020-01-16       Impact factor: 1.200

6.  Application of Augmented Intelligence for Pharmacovigilance Case Seriousness Determination.

Authors:  Ramani Routray; Niki Tetarenko; Claire Abu-Assal; Ruta Mockute; Bruno Assuncao; Hanqing Chen; Shenghua Bao; Karolina Danysz; Sameen Desai; Salvatore Cicirello; Van Willis; Sharon Hensley Alford; Vivek Krishnamurthy; Edward Mingle
Journal:  Drug Saf       Date:  2020-01       Impact factor: 5.606

7.  Validating Intelligent Automation Systems in Pharmacovigilance: Insights from Good Manufacturing Practices.

Authors:  Kristof Huysentruyt; Oeystein Kjoersvik; Pawel Dobracki; Elizabeth Savage; Ellen Mishalov; Mark Cherry; Eileen Leonard; Robert Taylor; Bhavin Patel; Danielle Abatemarco
Journal:  Drug Saf       Date:  2021-02-01       Impact factor: 5.606

8.  Artificial intelligence in managing clinical trial design and conduct: Man and machine still on the learning curve?

Authors:  Arun Bhatt
Journal:  Perspect Clin Res       Date:  2021-01-19

9.  Challenges and opportunities for mining adverse drug reactions: perspectives from pharma, regulatory agencies, healthcare providers and consumers.

Authors:  Graciela Gonzalez-Hernandez; Martin Krallinger; Monica Muñoz; Raul Rodriguez-Esteban; Özlem Uzuner; Lynette Hirschman
Journal:  Database (Oxford)       Date:  2022-09-02       Impact factor: 4.462

  9 in total

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