Literature DB >> 31932410

A New Comprehensive Colorectal Cancer Risk Prediction Model Incorporating Family History, Personal Characteristics, and Environmental Factors.

Mark A Jenkins1, Polly A Newcomb2,3, Yingye Zheng4,5, Xinwei Hua4,3, Aung K Win1,6, Robert J MacInnis1,7, Steven Gallinger8, Loic Le Marchand9, Noralane M Lindor10, John A Baron11, John L Hopper1, James G Dowty1, Antonis C Antoniou12, Jiayin Zheng4.   

Abstract

PURPOSE: Reducing colorectal cancer incidence and mortality through early detection would improve efficacy if targeted. We developed a colorectal cancer risk prediction model incorporating personal, family, genetic, and environmental risk factors to enhance prevention.
METHODS: A familial risk profile (FRP) was calculated to summarize individuals' risk based on detailed cancer family history (FH), family structure, probabilities of mutation in major colorectal cancer susceptibility genes, and a polygenic component. We developed risk models, including individuals' FRP or binary colorectal cancer FH, and colorectal cancer risk factors collected at enrollment using population-based colorectal cancer cases (N = 4,445) and controls (N = 3,967) recruited by the Colon Cancer Family Registry Cohort (CCFRC). Model validation used CCFRC follow-up data for population-based (N = 12,052) and clinic-based (N = 5,584) relatives with no cancer history at recruitment to assess model calibration [expected/observed rate ratio (E/O)] and discrimination [area under the receiver-operating-characteristic curve (AUC)].
RESULTS: The E/O [95% confidence interval (CI)] for FRP models for population-based relatives were 1.04 (0.74-1.45) for men and 0.86 (0.64-1.20) for women, and for clinic-based relatives were 1.15 (0.87-1.58) for men and 1.04 (0.76-1.45) for women. The age-adjusted AUCs (95% CI) for FRP models for population-based relatives were 0.69 (0.60-0.78) for men and 0.70 (0.62-0.77) for women, and for clinic-based relatives were 0.77 (0.69-0.84) for men and 0.68 (0.60-0.76) for women. The incremental values of AUC for FRP over FH models for population-based relatives were 0.08 (0.01-0.15) for men and 0.10 (0.04-0.16) for women, and for clinic-based relatives were 0.11 (0.05-0.17) for men and 0.11 (0.06-0.17) for women.
CONCLUSIONS: Both models calibrated well. The FRP-based model provided better risk stratification and risk discrimination than the FH-based model. IMPACT: Our findings suggest detailed FH may be useful for targeted risk-based screening and clinical management. ©2020 American Association for Cancer Research.

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Year:  2020        PMID: 31932410      PMCID: PMC7060114          DOI: 10.1158/1055-9965.EPI-19-0929

Source DB:  PubMed          Journal:  Cancer Epidemiol Biomarkers Prev        ISSN: 1055-9965            Impact factor:   4.254


  42 in total

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Authors:  Aung Ko Win; Robert J Macinnis; John L Hopper; Mark A Jenkins
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2011-12-14       Impact factor: 4.254

2.  Precision Screening for Colorectal Cancer: Promise and Challenges.

Authors:  Chyke A Doubeni
Journal:  Ann Intern Med       Date:  2015-09-01       Impact factor: 25.391

3.  Development and validation of a scoring system to identify individuals at high risk for advanced colorectal neoplasms who should undergo colonoscopy screening.

Authors:  Sha Tao; Michael Hoffmeister; Hermann Brenner
Journal:  Clin Gastroenterol Hepatol       Date:  2013-09-08       Impact factor: 11.382

4.  The finite polygenic mixed model: An alternative formulation for the mixed model of inheritance.

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Journal:  Theor Appl Genet       Date:  1994-07       Impact factor: 5.699

5.  Risks of Lynch syndrome cancers for MSH6 mutation carriers.

Authors:  Laura Baglietto; Noralane M Lindor; James G Dowty; Darren M White; Anja Wagner; Encarna B Gomez Garcia; Annette H J T Vriends; Nicola R Cartwright; Rebecca A Barnetson; Susan M Farrington; Albert Tenesa; Heather Hampel; Daniel Buchanan; Sven Arnold; Joanne Young; Michael D Walsh; Jeremy Jass; Finlay Macrae; Yoland Antill; Ingrid M Winship; Graham G Giles; Jack Goldblatt; Susan Parry; Graeme Suthers; Barbara Leggett; Malinda Butz; Melyssa Aronson; Jenny N Poynter; John A Baron; Loic Le Marchand; Robert Haile; Steve Gallinger; John L Hopper; John Potter; Albert de la Chapelle; Hans F Vasen; Malcolm G Dunlop; Stephen N Thibodeau; Mark A Jenkins
Journal:  J Natl Cancer Inst       Date:  2009-12-22       Impact factor: 13.506

6.  Development and validation of a risk stratification-based screening model for predicting colorectal advanced neoplasia in Korea.

Authors:  Dong Hyun Kim; Jae Myung Cha; Hyun Phil Shin; Kwang Ro Joo; Joung Il Lee; Dong Il Park
Journal:  J Clin Gastroenterol       Date:  2015-01       Impact factor: 3.062

7.  Cancer risks for MLH1 and MSH2 mutation carriers.

Authors:  James G Dowty; Aung K Win; Daniel D Buchanan; Noralane M Lindor; Finlay A Macrae; Mark Clendenning; Yoland C Antill; Stephen N Thibodeau; Graham Casey; Steve Gallinger; Loic Le Marchand; Polly A Newcomb; Robert W Haile; Graeme P Young; Paul A James; Graham G Giles; Shanaka R Gunawardena; Barbara A Leggett; Michael Gattas; Alex Boussioutas; Dennis J Ahnen; John A Baron; Susan Parry; Jack Goldblatt; Joanne P Young; John L Hopper; Mark A Jenkins
Journal:  Hum Mutat       Date:  2013-03       Impact factor: 4.878

Review 8.  Risk factors for colon neoplasia--epidemiology and biology.

Authors:  J D Potter
Journal:  Eur J Cancer       Date:  1995 Jul-Aug       Impact factor: 9.162

Review 9.  Quantifying the utility of single nucleotide polymorphisms to guide colorectal cancer screening.

Authors:  Mark A Jenkins; Enes Makalic; James G Dowty; Daniel F Schmidt; Gillian S Dite; Robert J MacInnis; Driss Ait Ouakrim; Mark Clendenning; Louisa B Flander; Oliver K Stanesby; John L Hopper; Aung K Win; Daniel D Buchanan
Journal:  Future Oncol       Date:  2016-02-01       Impact factor: 3.404

10.  Risk prediction model for colorectal cancer: National Health Insurance Corporation study, Korea.

Authors:  Aesun Shin; Jungnam Joo; Hye-Ryung Yang; Jeongin Bak; Yunjin Park; Jeongseon Kim; Jae Hwan Oh; Byung-Ho Nam
Journal:  PLoS One       Date:  2014-02-12       Impact factor: 3.240

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1.  Exploring a novel method for optimising the implementation of a colorectal cancer risk prediction tool into primary care: a qualitative study.

Authors:  Shakira Milton; Jon D Emery; Jane Rinaldi; Joanne Kinder; Adrian Bickerstaffe; Sibel Saya; Mark A Jenkins; Jennifer McIntosh
Journal:  Implement Sci       Date:  2022-05-12       Impact factor: 7.960

2.  Proteomic Profiling of Colon Cancer Tissues: Discovery of New Candidate Biomarkers.

Authors:  Miriam Buttacavoli; Nadia Ninfa Albanese; Elena Roz; Ida Pucci-Minafra; Salvatore Feo; Patrizia Cancemi
Journal:  Int J Mol Sci       Date:  2020-04-28       Impact factor: 5.923

3.  The Impact of a Comprehensive Risk Prediction Model for Colorectal Cancer on a Population Screening Program.

Authors:  Sibel Saya; Jon D Emery; James G Dowty; Jennifer G McIntosh; Ingrid M Winship; Mark A Jenkins
Journal:  JNCI Cancer Spectr       Date:  2020-07-18

4.  Translatability Analysis of National Institutes of Health-Funded Biomedical Research That Applies Artificial Intelligence.

Authors:  Feyisope R Eweje; Suzie Byun; Rajat Chandra; Fengling Hu; Ihab Kamel; Paul Zhang; Zhicheng Jiao; Harrison X Bai
Journal:  JAMA Netw Open       Date:  2022-01-04

5.  A clinical scoring tool validated with machine learning for predicting severe hand-foot syndrome from sorafenib in hepatocellular carcinoma.

Authors:  Ahmad Y Abuhelwa; Sarah Badaoui; Hoi-Yee Yuen; Ross A McKinnon; Warit Ruanglertboon; Kiran Shankaran; Anniepreet Tuteja; Michael J Sorich; Ashley M Hopkins
Journal:  Cancer Chemother Pharmacol       Date:  2022-02-28       Impact factor: 3.333

6.  Family cancer history and smoking habit associated with sarcoma in a Japanese population study.

Authors:  Yoshihiro Araki; Norio Yamamoto; Yoshikazu Tanzawa; Takahiro Higashi; Aya Kuchiba; Katsuhiro Hayashi; Akihiko Takeuchi; Shinji Miwa; Kentaro Igarashi; Makoto Endo; Eisuke Kobayashi; Hiroyuki Tsuchiya; Akira Kawai
Journal:  Sci Rep       Date:  2022-10-12       Impact factor: 4.996

7.  The SCRIPT trial: study protocol for a randomised controlled trial of a polygenic risk score to tailor colorectal cancer screening in primary care.

Authors:  Sibel Saya; Lucy Boyd; Patty Chondros; Mairead McNamara; Michelle King; Shakira Milton; Richard De Abreu Lourenco; Malcolm Clark; George Fishman; Julie Marker; Cheri Ostroff; Richard Allman; Fiona M Walter; Daniel Buchanan; Ingrid Winship; Jennifer McIntosh; Finlay Macrae; Mark Jenkins; Jon Emery
Journal:  Trials       Date:  2022-09-27       Impact factor: 2.728

8.  Translating Cancer Risk Prediction Models into Personalized Cancer Risk Assessment Tools: Stumbling Blocks and Strategies for Success.

Authors:  Erika A Waters; Jennifer M Taber; Amy McQueen; Ashley J Housten; Jamie L Studts; Laura D Scherer
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2020-10-12       Impact factor: 4.254

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