| Literature DB >> 31921461 |
Sang Loon Tan1, Edward R T Tiekink1.
Abstract
The crystal and mol-ecular structures of the title 1:2 co-crystal, C14H14N4O2·2C7H6O2, are described. The oxalamide mol-ecule has a (+)-anti-periplanar conformation with the 4-pyridyl residues lying to either side of the central, almost planar C2N2O2 chromophore (r.m.s. deviation = 0.0555 Å). The benzoic acid mol-ecules have equivalent, close to planar conformations [C6/CO2 dihedral angle = 6.33 (14) and 3.43 (10)°]. The formation of hy-droxy-O-H⋯N(pyrid-yl) hydrogen bonds between the benzoic acid mol-ecules and the pyridyl residues of the di-amide leads to a three-mol-ecule aggregate. Centrosymmetrically related aggregates assemble into a six-mol-ecule aggregate via amide-N-H⋯O(amide) hydrogen bonds through a 10-membered {⋯HNC2O}2 synthon. These are linked into a supra-molecular tape via amide-N-H⋯O(carbon-yl) hydrogen bonds and 22-membered {⋯HOCO⋯NC4NH}2 synthons. The contacts between tapes to consolidate the three-dimensional architecture are of the type methyl-ene-C-H⋯O(amide) and pyridyl-C-H⋯O(carbon-yl). These inter-actions are largely electrostatic in nature. Additional non-covalent contacts are identified from an analysis of the calculated Hirshfeld surfaces. © Tan and Tiekink 2020.Entities:
Keywords: Hirshfeld surface analysis; computational chemistry; crystal structure; hydrogen bonding; oxalamide
Year: 2020 PMID: 31921461 PMCID: PMC6944079 DOI: 10.1107/S2056989019016840
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1The molecular structures of the constituents of (I) showing the atom-labelling scheme and displacement ellipsoids at the 70% probability level.
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N2—H2 | 0.88 (1) | 2.36 (1) | 2.7192 (12) | 105 (1) |
| N3—H3 | 0.88 (1) | 2.36 (1) | 2.7154 (12) | 104 (1) |
| O4—H4 | 0.86 (2) | 1.78 (2) | 2.6366 (12) | 177 (2) |
| O6—H6 | 0.86 (2) | 1.72 (2) | 2.5731 (13) | 169 (2) |
| N2—H2 | 0.88 (1) | 2.05 (1) | 2.8618 (12) | 152 (1) |
| N3—H3 | 0.88 (1) | 2.12 (1) | 2.8516 (12) | 140 (1) |
| C1—H1⋯O3v | 0.95 | 2.58 | 3.2009 (14) | 124 |
| C2—H2⋯O5 | 0.95 | 2.47 | 3.3602 (14) | 155 |
| C6—H6 | 0.99 | 2.41 | 3.3826 (14) | 166 |
| C12—H12⋯O3vi | 0.95 | 2.36 | 3.3025 (15) | 171 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .
Figure 2Molecular packing in the crystal of (I): (a) supramolecular tape sustained by hydroxy-O—H⋯N(pyridyl) (orange dashed lines) and amide-N—H⋯O(amide, carbonyl) hydrogen bonds and (b) a view of the unit-cell contents in projection down the c axis with C—H⋯O interactions shown as pink dashed lines.
A summary of short interatomic contacts (Å) in (I)
| Contact | Distance | Symmetry operation |
|---|---|---|
| O2⋯H2 | 1.94 | 1 − |
| C1⋯H13 | 2.79 | −1 + |
| N1⋯H4 | 1.65 | −1 + |
| O3⋯H1 | 2.50 | 1 + |
| N4⋯H6 | 1.60 | 1 + |
| O5⋯H3 | 2.02 | − |
| O1⋯H28 | 2.57 | − |
| O1⋯H6 | 2.32 | − |
| C8⋯H20 | 2.61 |
|
| C12⋯C21 | 3.39 |
|
| C8⋯C26 | 3.35 |
|
| O5⋯H2 | 2.35 |
|
| O3⋯H9 | 2.56 |
|
| C17⋯H9 | 2.69 |
|
| O3⋯H12 | 2.23 | 1 − |
| C21⋯H25 | 2.62 | 1 − |
| C18⋯H27 | 2.67 |
|
| O4⋯H24 | 2.58 | 1 − |
Notes: (a) The interatomic distances are calculated in Crystal Explorer 17 (Turner et al., 2017 ▸) whereby the X—H bond lengths are adjusted to their neutron values; (b) these interactions correspond to conventional hydrogen bonds.
Figure 3The d norm map showing N—H⋯O (yellow dashed line), C—H⋯O (green), C—H⋯C (red) and C⋯C (blue) close contacts as indicated by the corresponding red spots with varying intensities within the range of −0.1004 to 1.1803 arbitrary units for (a) 4 LH2, (b) 4 LH2 viewed from a different perspective, (c) BA-II and (d) BA-II (left) and BA-I (right).
Figure 4The electrostatic potential mapped onto the Hirshfeld surface within the isosurface range of −0.0562 to 0.0861 atomic units for (a) 4 LH2, (b) 4 LH2, (c) BA-II and (d) BA-II (left) and BA-I (right).
Figure 5(a) The overall two-dimensional fingerprint plots for 4 LH2, BA-I, BA-II and the three-molecule aggregate in (I), and those delineated into (b) H⋯H, (c) H⋯O/O⋯H, (d) H⋯C/C⋯H and (e) H⋯N/N⋯H contacts, with the percentage contributions specified in each plot.
A summary of interaction energies (kJ mol−1) calculated for (I)
| Contact |
|
|
|
|
| Symmetry operation |
|---|---|---|---|---|---|---|
| N2—H2 | ||||||
| C13—H13⋯C1 | −60.9 | −14.6 | −58.5 | 82.5 | −75.2 | 1 − |
| O4—H4 | ||||||
| C1—H1⋯O3 | −90.7 | −21.3 | −13.0 | 118.0 | −50.1 | −1 + |
| O6—H6 | −95.2 | −22.2 | −11.3 | 134.4 | −43.9 | 1 + |
| N3—H3 | ||||||
| C28—H28⋯O1 | −32.8 | −8.6 | −16.1 | 30.3 | −36.3 | − |
| C6—H6 | −11.4 | −5.1 | −29.5 | 26.4 | −25.1 | − |
| C20—H20⋯C8/ | ||||||
| C12⋯C21 | −5.8 | −1.5 | −32.7 | 23.8 | −21.0 |
|
| C8⋯C26 | −3.7 | −1.0 | −31.9 | 21.1 | −19.4 |
|
| C2—H2⋯O5 | −9.4 | −1.9 | −14.0 | 12.9 | −15.6 |
|
| C9—H9 | ||||||
| C9—H9 | −6.0 | −2.2 | −17.3 | 13.5 | −14.7 |
|
| C12—H12⋯O3 | −9.5 | −2.4 | −4.9 | 12.6 | −8.3 | 1 − |
Figure 6Perspective views of the energy frameworks of (I), showing the (a) electrostatic force, (b) dispersion force and (c) total energy. The cylindrical radius is proportional to the relative strength of the corresponding energies and they were adjusted to the same scale factor of 100 with a cut-off value of 8 kJ mol−1 within a 2 × 2 × 2 unit cells.
Selected geometric data, i.e. central C—C bond length, O—H⋯N and NC—H⋯O(carbonyl) separations (Å) for 4 LH2 in its co-crystals with carboxylic acids and salt with a carboxylate anion
| Carboxylic acid (CA) | Symmetry of 4
| C—C | O—H⋯N(pyridyl) | NC—H⋯O(carbonyl) | REFCODE | Reference |
|---|---|---|---|---|---|---|
| 1:1 co-crystal | ||||||
| bis(carboxymethyl)urea | – | 1.53 (2) | 1.73 | 2.54 | CAJRAH | Nguyen |
| 1.75 | 4.21 | |||||
| diglycineoxamide |
| 1.514 (5) | 1.74 | 3.11 | SEPSIP01 | Nguyen |
| poly(1,2-bis(2-carboxyethyl)tetra-1-en-3-yn-1,4-diyl |
| 1.537 (13) | 1.80 | 2.98 | DOVSIR | Curtis |
| 2:1 co-crystal | ||||||
| (4-nitrophenyl)acetic acid |
| 1.543 (2) | 1.57 | 2.72 | NAXMEG | Arman, Kaulgud |
| benzoic acid | – | 1.5401 (14) | 1.67 | 2.59 | – | This work |
| 1.72 | 3.46 | |||||
| 2-methylbenzoic acid |
| 1.5356 (19) | 1.79 | 2.60 | WADXUX | Syed |
| acetic acid |
| 1.5397 (17) | 1.75 | 2.81 | GOQQIP | Tan & Tiekink (2019 |
| 2-[(4-hydroxyphenyl)diazenyl]benzoic acid |
| 1.542 (2) | 1.89 | – | AJEZEV | Arman |
| 2,6-dinitrobenzoate |
| 1.543 (3) | 1.96 | 2.51 | TIPGUW | Arman, Miller |
Notes: (a) Characterized as a di-hydrate; (b) hydroxy-O—N(pyridyl) hydrogen bond; (c) salt with a pyridinium-N—H⋯O(carboxylate) hydrogen bond.
Experimental details
| Crystal data | |
| Chemical formula | C14H14N4O2·2C7H6O2 |
|
| 514.53 |
| Crystal system, space group | Triclinic, |
| Temperature (K) | 100 |
|
| 9.6543 (2), 9.9235 (2), 14.1670 (3) |
| α, β, γ (°) | 100.755 (2), 108.318 (2), 95.617 (2) |
|
| 1247.90 (5) |
|
| 2 |
| Radiation type | Cu |
| μ (mm−1) | 0.81 |
| Crystal size (mm) | 0.12 × 0.07 × 0.05 |
| Data collection | |
| Diffractometer | Rigaku XtaLAB Synergy Dualflex AtlasS2 |
| Absorption correction | Gaussian ( |
|
| 0.832, 1.000 |
| No. of measured, independent and observed [ | 31534, 5220, 4736 |
|
| 0.031 |
| (sin θ/λ)max (Å−1) | 0.630 |
| Refinement | |
|
| 0.034, 0.093, 1.02 |
| No. of reflections | 5220 |
| No. of parameters | 359 |
| No. of restraints | 4 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
| Δρmax, Δρmin (e Å−3) | 0.21, −0.28 |
Computer programs: CrysAlis PRO (Rigaku OD, 2018 ▸), SHELXS (Sheldrick, 2015a ▸), SHELXL2017/1 (Sheldrick, 2015b ▸), ORTEP-3 for Windows (Farrugia, 2012 ▸), DIAMOND (Brandenburg, 2006 ▸) and publCIF (Westrip, 2010 ▸).
| C14H14N4O2·2C7H6O2 | |
| Triclinic, | |
| Cu | |
| Cell parameters from 16947 reflections | |
| θ = 3.3–76.2° | |
| α = 100.755 (2)° | µ = 0.81 mm−1 |
| β = 108.318 (2)° | |
| γ = 95.617 (2)° | Prism, colourless |
| 0.12 × 0.07 × 0.05 mm |
| Rigaku XtaLAB Synergy Dualflex AtlasS2 diffractometer | 5220 independent reflections |
| Radiation source: micro-focus sealed X-ray tube | 4736 reflections with |
| Detector resolution: 5.2558 pixels mm-1 | |
| ω scans | θmax = 76.4°, θmin = 3.4° |
| Absorption correction: gaussian (CrysAlis PRO; Rigaku OD, 2018) | |
| 31534 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: mixed | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 5220 reflections | (Δ/σ)max = 0.001 |
| 359 parameters | Δρmax = 0.21 e Å−3 |
| 4 restraints | Δρmin = −0.28 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| O1 | 0.11169 (8) | 0.35585 (8) | 0.52445 (6) | 0.02229 (17) | |
| O2 | 0.49733 (8) | 0.39415 (8) | 0.58292 (6) | 0.02091 (16) | |
| N1 | −0.09947 (10) | 0.21060 (9) | 0.09622 (7) | 0.02157 (19) | |
| N2 | 0.25702 (9) | 0.46333 (9) | 0.45149 (6) | 0.01791 (18) | |
| H2N | 0.3484 (10) | 0.4904 (14) | 0.4548 (10) | 0.024 (3)* | |
| N3 | 0.35581 (9) | 0.31253 (9) | 0.66765 (6) | 0.01757 (18) | |
| H3N | 0.2664 (11) | 0.2971 (14) | 0.6716 (11) | 0.025 (3)* | |
| N4 | 0.75967 (10) | 0.62970 (10) | 0.97336 (7) | 0.0225 (2) | |
| C1 | −0.14959 (11) | 0.32758 (11) | 0.12456 (8) | 0.0211 (2) | |
| H1 | −0.240536 | 0.343746 | 0.080891 | 0.025* | |
| C2 | −0.07474 (11) | 0.42577 (11) | 0.21457 (8) | 0.0198 (2) | |
| H2 | −0.113267 | 0.507935 | 0.231404 | 0.024* | |
| C3 | 0.05805 (11) | 0.40266 (11) | 0.28035 (8) | 0.0178 (2) | |
| C4 | 0.11019 (11) | 0.28206 (11) | 0.25088 (8) | 0.0209 (2) | |
| H4 | 0.200412 | 0.262855 | 0.293315 | 0.025* | |
| C5 | 0.02905 (12) | 0.18954 (11) | 0.15858 (8) | 0.0226 (2) | |
| H5 | 0.066421 | 0.107775 | 0.138881 | 0.027* | |
| C6 | 0.13776 (11) | 0.50952 (11) | 0.37960 (8) | 0.0190 (2) | |
| H6A | 0.178912 | 0.594422 | 0.363694 | 0.023* | |
| H6B | 0.064816 | 0.535030 | 0.412815 | 0.023* | |
| C7 | 0.23279 (11) | 0.39410 (10) | 0.51848 (7) | 0.0168 (2) | |
| C8 | 0.37639 (11) | 0.36670 (10) | 0.59305 (7) | 0.0165 (2) | |
| C9 | 0.47933 (11) | 0.27763 (11) | 0.74404 (8) | 0.0198 (2) | |
| H9A | 0.539689 | 0.227162 | 0.709171 | 0.024* | |
| H9B | 0.439995 | 0.214321 | 0.779400 | 0.024* | |
| C10 | 0.57768 (11) | 0.40374 (10) | 0.82273 (7) | 0.0179 (2) | |
| C11 | 0.51872 (12) | 0.50271 (12) | 0.87410 (9) | 0.0261 (2) | |
| H11 | 0.414595 | 0.494664 | 0.858090 | 0.031* | |
| C12 | 0.61289 (13) | 0.61374 (12) | 0.94915 (9) | 0.0274 (2) | |
| H12 | 0.571438 | 0.680499 | 0.984407 | 0.033* | |
| C13 | 0.81637 (12) | 0.53568 (12) | 0.92284 (8) | 0.0242 (2) | |
| H13 | 0.920690 | 0.547791 | 0.938956 | 0.029* | |
| C14 | 0.73011 (12) | 0.42117 (12) | 0.84793 (8) | 0.0224 (2) | |
| H14 | 0.774771 | 0.355655 | 0.814404 | 0.027* | |
| O3 | 0.55315 (9) | 1.14822 (8) | 0.95498 (6) | 0.02525 (18) | |
| O4 | 0.72142 (9) | 1.01211 (8) | 0.94323 (6) | 0.02496 (18) | |
| H4O | 0.778 (2) | 1.0790 (17) | 0.9921 (12) | 0.073 (6)* | |
| C15 | 0.58610 (11) | 1.04164 (11) | 0.91631 (8) | 0.0187 (2) | |
| C16 | 0.47533 (12) | 0.93433 (11) | 0.82989 (8) | 0.0190 (2) | |
| C17 | 0.32865 (12) | 0.95458 (11) | 0.79630 (8) | 0.0212 (2) | |
| H17 | 0.299289 | 1.032279 | 0.830770 | 0.025* | |
| C18 | 0.22525 (12) | 0.86117 (12) | 0.71238 (9) | 0.0251 (2) | |
| H18 | 0.125298 | 0.875244 | 0.689406 | 0.030* | |
| C19 | 0.26769 (13) | 0.74743 (12) | 0.66210 (9) | 0.0277 (2) | |
| H19 | 0.197060 | 0.684161 | 0.604343 | 0.033* | |
| C20 | 0.41328 (14) | 0.72607 (12) | 0.69617 (9) | 0.0285 (3) | |
| H20 | 0.442188 | 0.648021 | 0.661755 | 0.034* | |
| C21 | 0.51726 (12) | 0.81880 (11) | 0.78076 (9) | 0.0234 (2) | |
| H21 | 0.616527 | 0.803107 | 0.804782 | 0.028* | |
| O5 | −0.16140 (8) | 0.74669 (8) | 0.22439 (6) | 0.02307 (17) | |
| O6 | −0.03885 (9) | 0.80244 (9) | 0.12317 (6) | 0.02892 (19) | |
| H6O | −0.1140 (19) | 0.747 (2) | 0.0769 (14) | 0.088 (8)* | |
| C22 | −0.05202 (11) | 0.80401 (10) | 0.21249 (8) | 0.0187 (2) | |
| C23 | 0.08033 (11) | 0.88364 (10) | 0.30063 (8) | 0.0180 (2) | |
| C24 | 0.20594 (11) | 0.94266 (11) | 0.28499 (8) | 0.0192 (2) | |
| H24 | 0.209182 | 0.931865 | 0.217699 | 0.023* | |
| C25 | 0.32654 (12) | 1.01739 (11) | 0.36799 (8) | 0.0220 (2) | |
| H25 | 0.412647 | 1.056907 | 0.357507 | 0.026* | |
| C26 | 0.32108 (12) | 1.03425 (11) | 0.46627 (8) | 0.0238 (2) | |
| H26 | 0.402958 | 1.086590 | 0.522807 | 0.029* | |
| C27 | 0.19693 (13) | 0.97515 (12) | 0.48208 (8) | 0.0263 (2) | |
| H27 | 0.193811 | 0.986854 | 0.549439 | 0.032* | |
| C28 | 0.07667 (12) | 0.89864 (12) | 0.39969 (8) | 0.0234 (2) | |
| H28 | −0.007838 | 0.856648 | 0.410794 | 0.028* |
| O1 | 0.0163 (3) | 0.0268 (4) | 0.0250 (4) | 0.0018 (3) | 0.0078 (3) | 0.0085 (3) |
| O2 | 0.0161 (3) | 0.0251 (4) | 0.0224 (4) | 0.0018 (3) | 0.0071 (3) | 0.0073 (3) |
| N1 | 0.0217 (4) | 0.0236 (4) | 0.0177 (4) | 0.0029 (3) | 0.0053 (3) | 0.0035 (3) |
| N2 | 0.0144 (4) | 0.0222 (4) | 0.0158 (4) | 0.0011 (3) | 0.0041 (3) | 0.0041 (3) |
| N3 | 0.0153 (4) | 0.0199 (4) | 0.0159 (4) | 0.0001 (3) | 0.0042 (3) | 0.0037 (3) |
| N4 | 0.0231 (4) | 0.0248 (5) | 0.0158 (4) | −0.0006 (4) | 0.0035 (3) | 0.0036 (3) |
| C1 | 0.0189 (5) | 0.0246 (5) | 0.0190 (5) | 0.0039 (4) | 0.0040 (4) | 0.0072 (4) |
| C2 | 0.0193 (5) | 0.0200 (5) | 0.0205 (5) | 0.0045 (4) | 0.0064 (4) | 0.0055 (4) |
| C3 | 0.0171 (5) | 0.0206 (5) | 0.0168 (5) | 0.0014 (4) | 0.0068 (4) | 0.0058 (4) |
| C4 | 0.0189 (5) | 0.0245 (5) | 0.0188 (5) | 0.0056 (4) | 0.0050 (4) | 0.0058 (4) |
| C5 | 0.0241 (5) | 0.0230 (5) | 0.0207 (5) | 0.0072 (4) | 0.0072 (4) | 0.0039 (4) |
| C6 | 0.0187 (5) | 0.0203 (5) | 0.0171 (5) | 0.0039 (4) | 0.0045 (4) | 0.0046 (4) |
| C7 | 0.0166 (5) | 0.0166 (4) | 0.0151 (4) | 0.0012 (4) | 0.0048 (4) | 0.0008 (4) |
| C8 | 0.0166 (4) | 0.0147 (4) | 0.0154 (4) | 0.0005 (3) | 0.0041 (4) | 0.0005 (4) |
| C9 | 0.0199 (5) | 0.0194 (5) | 0.0178 (5) | 0.0021 (4) | 0.0033 (4) | 0.0051 (4) |
| C10 | 0.0193 (5) | 0.0200 (5) | 0.0138 (4) | 0.0020 (4) | 0.0038 (4) | 0.0061 (4) |
| C11 | 0.0174 (5) | 0.0309 (6) | 0.0248 (5) | 0.0033 (4) | 0.0044 (4) | −0.0005 (5) |
| C12 | 0.0249 (5) | 0.0285 (6) | 0.0241 (5) | 0.0046 (4) | 0.0065 (4) | −0.0020 (4) |
| C13 | 0.0171 (5) | 0.0319 (6) | 0.0211 (5) | 0.0005 (4) | 0.0041 (4) | 0.0058 (4) |
| C14 | 0.0213 (5) | 0.0258 (5) | 0.0199 (5) | 0.0044 (4) | 0.0077 (4) | 0.0035 (4) |
| O3 | 0.0264 (4) | 0.0233 (4) | 0.0216 (4) | 0.0062 (3) | 0.0047 (3) | −0.0006 (3) |
| O4 | 0.0220 (4) | 0.0262 (4) | 0.0213 (4) | 0.0050 (3) | 0.0038 (3) | −0.0017 (3) |
| C15 | 0.0226 (5) | 0.0211 (5) | 0.0139 (4) | 0.0036 (4) | 0.0071 (4) | 0.0057 (4) |
| C16 | 0.0239 (5) | 0.0191 (5) | 0.0151 (5) | 0.0011 (4) | 0.0077 (4) | 0.0062 (4) |
| C17 | 0.0250 (5) | 0.0207 (5) | 0.0196 (5) | 0.0028 (4) | 0.0091 (4) | 0.0067 (4) |
| C18 | 0.0233 (5) | 0.0277 (6) | 0.0231 (5) | −0.0008 (4) | 0.0054 (4) | 0.0095 (4) |
| C19 | 0.0312 (6) | 0.0246 (5) | 0.0219 (5) | −0.0066 (4) | 0.0061 (4) | 0.0030 (4) |
| C20 | 0.0346 (6) | 0.0211 (5) | 0.0271 (6) | −0.0005 (5) | 0.0121 (5) | −0.0009 (4) |
| C21 | 0.0249 (5) | 0.0216 (5) | 0.0238 (5) | 0.0025 (4) | 0.0096 (4) | 0.0042 (4) |
| O5 | 0.0201 (4) | 0.0254 (4) | 0.0238 (4) | 0.0009 (3) | 0.0082 (3) | 0.0061 (3) |
| O6 | 0.0266 (4) | 0.0374 (5) | 0.0158 (4) | −0.0093 (3) | 0.0058 (3) | −0.0004 (3) |
| C22 | 0.0203 (5) | 0.0175 (5) | 0.0187 (5) | 0.0035 (4) | 0.0070 (4) | 0.0045 (4) |
| C23 | 0.0203 (5) | 0.0158 (4) | 0.0174 (5) | 0.0041 (4) | 0.0055 (4) | 0.0038 (4) |
| C24 | 0.0216 (5) | 0.0196 (5) | 0.0171 (5) | 0.0048 (4) | 0.0067 (4) | 0.0049 (4) |
| C25 | 0.0192 (5) | 0.0218 (5) | 0.0233 (5) | 0.0023 (4) | 0.0053 (4) | 0.0050 (4) |
| C26 | 0.0234 (5) | 0.0226 (5) | 0.0194 (5) | 0.0054 (4) | 0.0010 (4) | 0.0011 (4) |
| C27 | 0.0315 (6) | 0.0310 (6) | 0.0156 (5) | 0.0068 (5) | 0.0072 (4) | 0.0042 (4) |
| C28 | 0.0251 (5) | 0.0267 (5) | 0.0205 (5) | 0.0034 (4) | 0.0102 (4) | 0.0066 (4) |
| O1—C7 | 1.2270 (12) | C13—H13 | 0.9500 |
| O2—C8 | 1.2312 (12) | C14—H14 | 0.9500 |
| N1—C5 | 1.3395 (14) | O3—C15 | 1.2162 (13) |
| N1—C1 | 1.3421 (14) | O4—C15 | 1.3197 (13) |
| N2—C7 | 1.3336 (13) | O4—H4O | 0.860 (10) |
| N2—C6 | 1.4538 (13) | C15—C16 | 1.4980 (14) |
| N2—H2N | 0.881 (9) | C16—C21 | 1.3902 (15) |
| N3—C8 | 1.3298 (13) | C16—C17 | 1.3929 (15) |
| N3—C9 | 1.4570 (13) | C17—C18 | 1.3895 (15) |
| N3—H3N | 0.883 (9) | C17—H17 | 0.9500 |
| N4—C12 | 1.3346 (15) | C18—C19 | 1.3867 (17) |
| N4—C13 | 1.3338 (15) | C18—H18 | 0.9500 |
| C1—C2 | 1.3845 (15) | C19—C20 | 1.3869 (18) |
| C1—H1 | 0.9500 | C19—H19 | 0.9500 |
| C2—C3 | 1.3968 (14) | C20—C21 | 1.3935 (16) |
| C2—H2 | 0.9500 | C20—H20 | 0.9500 |
| C3—C4 | 1.3869 (15) | C21—H21 | 0.9500 |
| C3—C6 | 1.5157 (14) | O5—C22 | 1.2237 (13) |
| C4—C5 | 1.3906 (15) | O6—C22 | 1.3084 (13) |
| C4—H4 | 0.9500 | O6—H6O | 0.865 (10) |
| C5—H5 | 0.9500 | C22—C23 | 1.4991 (14) |
| C6—H6A | 0.9900 | C23—C24 | 1.3932 (15) |
| C6—H6B | 0.9900 | C23—C28 | 1.3955 (15) |
| C7—C8 | 1.5402 (14) | C24—C25 | 1.3904 (15) |
| C9—C10 | 1.5139 (14) | C24—H24 | 0.9500 |
| C9—H9A | 0.9900 | C25—C26 | 1.3893 (16) |
| C9—H9B | 0.9900 | C25—H25 | 0.9500 |
| C10—C11 | 1.3861 (15) | C26—C27 | 1.3824 (17) |
| C10—C14 | 1.3857 (15) | C26—H26 | 0.9500 |
| C11—C12 | 1.3894 (16) | C27—C28 | 1.3899 (16) |
| C11—H11 | 0.9500 | C27—H27 | 0.9500 |
| C12—H12 | 0.9500 | C28—H28 | 0.9500 |
| C13—C14 | 1.3857 (15) | ||
| C5—N1—C1 | 117.75 (9) | N4—C13—C14 | 123.03 (10) |
| C7—N2—C6 | 121.82 (9) | N4—C13—H13 | 118.5 |
| C7—N2—H2N | 119.7 (9) | C14—C13—H13 | 118.5 |
| C6—N2—H2N | 118.1 (9) | C13—C14—C10 | 118.93 (10) |
| C8—N3—C9 | 120.98 (9) | C13—C14—H14 | 120.5 |
| C8—N3—H3N | 120.2 (9) | C10—C14—H14 | 120.5 |
| C9—N3—H3N | 118.8 (9) | C15—O4—H4O | 108.5 (15) |
| C12—N4—C13 | 118.30 (9) | O3—C15—O4 | 123.81 (9) |
| N1—C1—C2 | 122.96 (10) | O3—C15—C16 | 122.06 (10) |
| N1—C1—H1 | 118.5 | O4—C15—C16 | 114.08 (9) |
| C2—C1—H1 | 118.5 | C21—C16—C17 | 119.87 (10) |
| C1—C2—C3 | 119.25 (10) | C21—C16—C15 | 121.37 (10) |
| C1—C2—H2 | 120.4 | C17—C16—C15 | 118.72 (9) |
| C3—C2—H2 | 120.4 | C16—C17—C18 | 120.01 (10) |
| C4—C3—C2 | 117.79 (9) | C16—C17—H17 | 120.0 |
| C4—C3—C6 | 123.35 (9) | C18—C17—H17 | 120.0 |
| C2—C3—C6 | 118.85 (9) | C19—C18—C17 | 120.12 (11) |
| C3—C4—C5 | 119.32 (10) | C19—C18—H18 | 119.9 |
| C3—C4—H4 | 120.3 | C17—C18—H18 | 119.9 |
| C5—C4—H4 | 120.3 | C18—C19—C20 | 119.98 (10) |
| N1—C5—C4 | 122.91 (10) | C18—C19—H19 | 120.0 |
| N1—C5—H5 | 118.5 | C20—C19—H19 | 120.0 |
| C4—C5—H5 | 118.5 | C19—C20—C21 | 120.18 (11) |
| N2—C6—C3 | 114.41 (8) | C19—C20—H20 | 119.9 |
| N2—C6—H6A | 108.7 | C21—C20—H20 | 119.9 |
| C3—C6—H6A | 108.7 | C16—C21—C20 | 119.82 (11) |
| N2—C6—H6B | 108.7 | C16—C21—H21 | 120.1 |
| C3—C6—H6B | 108.7 | C20—C21—H21 | 120.1 |
| H6A—C6—H6B | 107.6 | C22—O6—H6O | 108.4 (17) |
| O1—C7—N2 | 125.93 (9) | O5—C22—O6 | 123.94 (9) |
| O1—C7—C8 | 121.14 (9) | O5—C22—C23 | 122.33 (9) |
| N2—C7—C8 | 112.92 (8) | O6—C22—C23 | 113.73 (9) |
| O2—C8—N3 | 124.54 (9) | C24—C23—C28 | 119.83 (9) |
| O2—C8—C7 | 121.86 (9) | C24—C23—C22 | 121.07 (9) |
| N3—C8—C7 | 113.60 (9) | C28—C23—C22 | 119.10 (9) |
| N3—C9—C10 | 113.22 (8) | C25—C24—C23 | 119.91 (10) |
| N3—C9—H9A | 108.9 | C25—C24—H24 | 120.0 |
| C10—C9—H9A | 108.9 | C23—C24—H24 | 120.0 |
| N3—C9—H9B | 108.9 | C26—C25—C24 | 119.98 (10) |
| C10—C9—H9B | 108.9 | C26—C25—H25 | 120.0 |
| H9A—C9—H9B | 107.7 | C24—C25—H25 | 120.0 |
| C11—C10—C14 | 117.99 (9) | C27—C26—C25 | 120.23 (10) |
| C11—C10—C9 | 121.18 (9) | C27—C26—H26 | 119.9 |
| C14—C10—C9 | 120.79 (9) | C25—C26—H26 | 119.9 |
| C10—C11—C12 | 119.57 (10) | C26—C27—C28 | 120.18 (10) |
| C10—C11—H11 | 120.2 | C26—C27—H27 | 119.9 |
| C12—C11—H11 | 120.2 | C28—C27—H27 | 119.9 |
| N4—C12—C11 | 122.16 (11) | C27—C28—C23 | 119.85 (10) |
| N4—C12—H12 | 118.9 | C27—C28—H28 | 120.1 |
| C11—C12—H12 | 118.9 | C23—C28—H28 | 120.1 |
| C5—N1—C1—C2 | −0.12 (16) | N4—C13—C14—C10 | 1.01 (17) |
| N1—C1—C2—C3 | −0.91 (16) | C11—C10—C14—C13 | 0.07 (16) |
| C1—C2—C3—C4 | 1.13 (15) | C9—C10—C14—C13 | −177.84 (10) |
| C1—C2—C3—C6 | −178.91 (9) | O3—C15—C16—C21 | 174.45 (10) |
| C2—C3—C4—C5 | −0.39 (15) | O4—C15—C16—C21 | −3.20 (14) |
| C6—C3—C4—C5 | 179.65 (10) | O3—C15—C16—C17 | −3.13 (15) |
| C1—N1—C5—C4 | 0.91 (16) | O4—C15—C16—C17 | 179.22 (9) |
| C3—C4—C5—N1 | −0.66 (17) | C21—C16—C17—C18 | −1.48 (15) |
| C7—N2—C6—C3 | −87.36 (12) | C15—C16—C17—C18 | 176.13 (9) |
| C4—C3—C6—N2 | −12.00 (14) | C16—C17—C18—C19 | 0.20 (16) |
| C2—C3—C6—N2 | 168.05 (9) | C17—C18—C19—C20 | 0.61 (17) |
| C6—N2—C7—O1 | 3.86 (16) | C18—C19—C20—C21 | −0.12 (18) |
| C6—N2—C7—C8 | −175.03 (8) | C17—C16—C21—C20 | 1.96 (16) |
| C9—N3—C8—O2 | −1.50 (15) | C15—C16—C21—C20 | −175.59 (10) |
| C9—N3—C8—C7 | 178.88 (8) | C19—C20—C21—C16 | −1.17 (17) |
| O1—C7—C8—O2 | 173.94 (9) | O5—C22—C23—C24 | 177.14 (10) |
| N2—C7—C8—O2 | −7.10 (13) | O6—C22—C23—C24 | −3.01 (14) |
| O1—C7—C8—N3 | −6.43 (13) | O5—C22—C23—C28 | −2.98 (16) |
| N2—C7—C8—N3 | 172.52 (8) | O6—C22—C23—C28 | 176.87 (10) |
| C8—N3—C9—C10 | 75.45 (12) | C28—C23—C24—C25 | −0.63 (15) |
| N3—C9—C10—C11 | 50.59 (14) | C22—C23—C24—C25 | 179.25 (9) |
| N3—C9—C10—C14 | −131.57 (10) | C23—C24—C25—C26 | −0.63 (16) |
| C14—C10—C11—C12 | −0.84 (17) | C24—C25—C26—C27 | 1.00 (16) |
| C9—C10—C11—C12 | 177.05 (10) | C25—C26—C27—C28 | −0.10 (17) |
| C13—N4—C12—C11 | 0.40 (18) | C26—C27—C28—C23 | −1.16 (17) |
| C10—C11—C12—N4 | 0.64 (19) | C24—C23—C28—C27 | 1.52 (16) |
| C12—N4—C13—C14 | −1.24 (17) | C22—C23—C28—C27 | −178.36 (10) |
| H··· | ||||
| N2—H2 | 0.88 (1) | 2.36 (1) | 2.7192 (12) | 105 (1) |
| N3—H3 | 0.88 (1) | 2.36 (1) | 2.7154 (12) | 104 (1) |
| O4—H4 | 0.86 (2) | 1.78 (2) | 2.6366 (12) | 177 (2) |
| O6—H6 | 0.86 (2) | 1.72 (2) | 2.5731 (13) | 169 (2) |
| N2—H2 | 0.88 (1) | 2.05 (1) | 2.8618 (12) | 152 (1) |
| N3—H3 | 0.88 (1) | 2.12 (1) | 2.8516 (12) | 140 (1) |
| C1—H1···O3v | 0.95 | 2.58 | 3.2009 (14) | 124 |
| C2—H2···O5 | 0.95 | 2.47 | 3.3602 (14) | 155 |
| C6—H6 | 0.99 | 2.41 | 3.3826 (14) | 166 |
| C12—H12···O3vi | 0.95 | 2.36 | 3.3025 (15) | 171 |