Literature DB >> 31885318

Stable tRNA halves can be sorted into extracellular vesicles and delivered to recipient cells in a concentration-dependent manner.

Fabiana Gámbaro1,2, Marco Li Calzi1, Pablo Fagúndez1,3, Bruno Costa1,3, Gonzalo Greif4, Emily Mallick5, Shawn Lyons6,7,8, Pavel Ivanov6,7,9, Kenneth Witwer5, Alfonso Cayota1,10, Juan Pablo Tosar1,3.   

Abstract

Extracellular vesicles (EVs) are cell-derived nanoparticles that act as natural carriers of nucleic acids between cells. They offer advantages as delivery vehicles for therapeutic nucleic acids such as small RNAs. Loading of desired nucleic acids into EVs can be achieved by electroporation or transfection once purified. An attractive alternative is to transfect cells with the desired small RNAs and harness the cellular machinery for RNA sorting into the EVs. This possibility has been less explored because cells are believed to secrete only specific RNAs. However, we hypothesized that, even in the presence of selective secretion, concentration-driven RNA sorting to EVs would still be feasible. To show this, we transfected cells with glycine 5' tRNA halves, which we have previously shown to better resist RNases. We then measured their levels in EVs and in recipient cells and found that, in contrast to unstable RNAs of random sequence, these tRNA halves were present in vesicles and in recipient cells in amounts proportional to the concentration of RNA used for transfection. Similar efficiencies were obtained with other stable oligonucleotides of random sequence. Our results demonstrate that RNA stability is a key factor needed to maintain high intracellular concentrations, a prerequisite for efficient non-selective RNA sorting to EVs and delivery to cells. Given that glycine 5' tRNA halves belong to the group of stress-induced tRNA fragments frequently detected in extracellular space and biofluids, we propose that upregulation of extracellular tRNA fragments is consequential to cellular stress and might be involved in intercellular signalling.

Entities:  

Keywords:  exosomes; intercellular communication; secretion; tiRNAs; vesicles

Mesh:

Substances:

Year:  2019        PMID: 31885318      PMCID: PMC7549683          DOI: 10.1080/15476286.2019.1708548

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  64 in total

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Authors:  Shawn M Lyons; Marta M Fay; Yasutoshi Akiyama; Paul J Anderson; Pavel Ivanov
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2.  Cancer exosomes perform cell-independent microRNA biogenesis and promote tumorigenesis.

Authors:  Sonia A Melo; Hikaru Sugimoto; Joyce T O'Connell; Noritoshi Kato; Alberto Villanueva; August Vidal; Le Qiu; Edward Vitkin; Lev T Perelman; Carlos A Melo; Anthony Lucci; Cristina Ivan; George A Calin; Raghu Kalluri
Journal:  Cancer Cell       Date:  2014-10-23       Impact factor: 31.743

3.  Melanoma exosomes educate bone marrow progenitor cells toward a pro-metastatic phenotype through MET.

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Journal:  Nat Med       Date:  2012-06       Impact factor: 53.440

4.  A population of tRNA-derived small RNAs is actively produced in Trypanosoma cruzi and recruited to specific cytoplasmic granules.

Authors:  Maria Rosa Garcia-Silva; Magali Frugier; Juan Pablo Tosar; Alejandro Correa-Dominguez; Lysangela Ronalte-Alves; Adriana Parodi-Talice; Carlos Rovira; Carlos Robello; Samuel Goldenberg; Alfonso Cayota
Journal:  Mol Biochem Parasitol       Date:  2010-02-13       Impact factor: 1.759

5.  Intercellular transfer of the oncogenic receptor EGFRvIII by microvesicles derived from tumour cells.

Authors:  Khalid Al-Nedawi; Brian Meehan; Johann Micallef; Vladimir Lhotak; Linda May; Abhijit Guha; Janusz Rak
Journal:  Nat Cell Biol       Date:  2008-04-20       Impact factor: 28.824

6.  Unidirectional transfer of microRNA-loaded exosomes from T cells to antigen-presenting cells.

Authors:  María Mittelbrunn; Cristina Gutiérrez-Vázquez; Carolina Villarroya-Beltri; Susana González; Fátima Sánchez-Cabo; Manuel Ángel González; Antonio Bernad; Francisco Sánchez-Madrid
Journal:  Nat Commun       Date:  2011       Impact factor: 14.919

7.  Applying extracellular vesicles based therapeutics in clinical trials - an ISEV position paper.

Authors:  Thomas Lener; Mario Gimona; Ludwig Aigner; Verena Börger; Edit Buzas; Giovanni Camussi; Nathalie Chaput; Devasis Chatterjee; Felipe A Court; Hernando A Del Portillo; Lorraine O'Driscoll; Stefano Fais; Juan M Falcon-Perez; Ursula Felderhoff-Mueser; Lorenzo Fraile; Yong Song Gho; André Görgens; Ramesh C Gupta; An Hendrix; Dirk M Hermann; Andrew F Hill; Fred Hochberg; Peter A Horn; Dominique de Kleijn; Lambros Kordelas; Boris W Kramer; Eva-Maria Krämer-Albers; Sandra Laner-Plamberger; Saara Laitinen; Tommaso Leonardi; Magdalena J Lorenowicz; Sai Kiang Lim; Jan Lötvall; Casey A Maguire; Antonio Marcilla; Irina Nazarenko; Takahiro Ochiya; Tushar Patel; Shona Pedersen; Gabriella Pocsfalvi; Stefano Pluchino; Peter Quesenberry; Ilona G Reischl; Francisco J Rivera; Ralf Sanzenbacher; Katharina Schallmoser; Ineke Slaper-Cortenbach; Dirk Strunk; Torsten Tonn; Pieter Vader; Bas W M van Balkom; Marca Wauben; Samir El Andaloussi; Clotilde Théry; Eva Rohde; Bernd Giebel
Journal:  J Extracell Vesicles       Date:  2015-12-31

8.  Obstacles and opportunities in the functional analysis of extracellular vesicle RNA - an ISEV position paper.

Authors:  Bogdan Mateescu; Emma J K Kowal; Bas W M van Balkom; Sabine Bartel; Suvendra N Bhattacharyya; Edit I Buzás; Amy H Buck; Paola de Candia; Franklin W N Chow; Saumya Das; Tom A P Driedonks; Lola Fernández-Messina; Franziska Haderk; Andrew F Hill; Jennifer C Jones; Kendall R Van Keuren-Jensen; Charles P Lai; Cecilia Lässer; Italia di Liegro; Taral R Lunavat; Magdalena J Lorenowicz; Sybren L N Maas; Imre Mäger; Maria Mittelbrunn; Stefan Momma; Kamalika Mukherjee; Muhammed Nawaz; D Michiel Pegtel; Michael W Pfaffl; Raymond M Schiffelers; Hidetoshi Tahara; Clotilde Théry; Juan Pablo Tosar; Marca H M Wauben; Kenneth W Witwer; Esther N M Nolte-'t Hoen
Journal:  J Extracell Vesicles       Date:  2017-03-07

9.  5' tRNA halves are present as abundant complexes in serum, concentrated in blood cells, and modulated by aging and calorie restriction.

Authors:  Joseph M Dhahbi; Stephen R Spindler; Hani Atamna; Amy Yamakawa; Dario Boffelli; Patricia Mote; David I K Martin
Journal:  BMC Genomics       Date:  2013-05-02       Impact factor: 3.969

10.  Selective extracellular vesicle-mediated export of an overlapping set of microRNAs from multiple cell types.

Authors:  Jasenka Guduric-Fuchs; Anna O'Connor; Bailey Camp; Christina L O'Neill; Reinhold J Medina; David A Simpson
Journal:  BMC Genomics       Date:  2012-08-01       Impact factor: 3.969

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  21 in total

1.  The regulatory world of tRNA fragments beyond canonical tRNA biology.

Authors:  Norbert Polacek; Pavel Ivanov
Journal:  RNA Biol       Date:  2020-08       Impact factor: 4.652

Review 2.  Extracellular tRNAs and tRNA-derived fragments.

Authors:  Juan Pablo Tosar; Alfonso Cayota
Journal:  RNA Biol       Date:  2020-02-19       Impact factor: 4.652

Review 3.  Landscape of Clinically Relevant Exosomal tRNA-Derived Non-coding RNAs.

Authors:  Padmanaban S Suresh; Sanu Thankachan; Thejaswini Venkatesh
Journal:  Mol Biotechnol       Date:  2022-08-23       Impact factor: 2.860

4.  Experimental paradigms revisited: oxidative stress-induced tRNA fragmentation does not correlate with stress granule formation but is associated with delayed cell death.

Authors:  Nasim Sanadgol; Lisa König; Aleksej Drino; Michaela Jovic; Matthias R Schaefer
Journal:  Nucleic Acids Res       Date:  2022-06-14       Impact factor: 19.160

Review 5.  Diverse roles of EV-RNA in cancer progression.

Authors:  Alexander Cocks; Verena Martinez-Rodriguez; Filippo Del Vecchio; Monique Schukking; Elisabetta Broseghini; Stefanos Giannakopoulos; Muller Fabbri
Journal:  Semin Cancer Biol       Date:  2021-01-10       Impact factor: 17.012

Review 6.  Revisiting Extracellular RNA Release, Processing, and Function.

Authors:  Juan Pablo Tosar; Kenneth Witwer; Alfonso Cayota
Journal:  Trends Biochem Sci       Date:  2021-01-04       Impact factor: 14.264

Review 7.  RNA delivery by extracellular vesicles in mammalian cells and its applications.

Authors:  Killian O'Brien; Koen Breyne; Stefano Ughetto; Louise C Laurent; Xandra O Breakefield
Journal:  Nat Rev Mol Cell Biol       Date:  2020-05-26       Impact factor: 94.444

Review 8.  The Malignant Role of Exosomes as Nanocarriers of Rare RNA Species.

Authors:  Alina-Andreea Zimta; Olafur Eysteinn Sigurjonsson; Diana Gulei; Ciprian Tomuleasa
Journal:  Int J Mol Sci       Date:  2020-08-15       Impact factor: 5.923

9.  Characterization of extracellular vesicles and synthetic nanoparticles with four orthogonal single-particle analysis platforms.

Authors:  Tanina Arab; Emily R Mallick; Yiyao Huang; Liang Dong; Zhaohao Liao; Zezhou Zhao; Olesia Gololobova; Barbara Smith; Norman J Haughey; Kenneth J Pienta; Barbara S Slusher; Patrick M Tarwater; Juan Pablo Tosar; Angela M Zivkovic; Wyatt N Vreeland; Michael E Paulaitis; Kenneth W Witwer
Journal:  J Extracell Vesicles       Date:  2021-04-06

Review 10.  tRNA-Derived Small RNAs and Their Potential Roles in Cardiac Hypertrophy.

Authors:  Jun Cao; Douglas B Cowan; Da-Zhi Wang
Journal:  Front Pharmacol       Date:  2020-09-17       Impact factor: 5.810

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