Literature DB >> 3185548

Characterization of the repressed 5S DNA minichromosomes assembled in vitro with a high-speed supernatant of Xenopus laevis oocytes.

A Shimamura1, D Tremethick, A Worcel.   

Abstract

We describe an in vitro system, based on the Xenopus laevis oocyte supernatant of Glikin et al. (G. Glikin, I. Ruberti, and A. Worcel, Cell 37:33-41, 1984), that packages DNA into minichromosomes with regularly spaced nucleosomes containing histones H3, H4, H2A, and H2B but no histone H1. The same supernatant also assembles the 5S RNA transcription complex; however, under the conditions that favor chromatin assembly, transcription is inhibited and a phased nucleosome forms over the 5S RNA gene. The minichromosomes that are fully loaded with nucleosomes remain refractory to transcriptional activation by 5S RNA transcription factors. Our data suggest that this repression is caused by a nucleosome covering the 5S RNA gene and that histone H1 is not required for regular nucleosome spacing or for gene repression in this system.

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Year:  1988        PMID: 3185548      PMCID: PMC365498          DOI: 10.1128/mcb.8.10.4257-4269.1988

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  72 in total

1.  Negative supercoiling is not required for 5S RNA transcription in vitro.

Authors:  A P Wolffe; M T Andrews; E Crawford; R Losa; D D Brown
Journal:  Cell       Date:  1987-05-08       Impact factor: 41.582

2.  Mechanism of chromatin assembly in Xenopus oocytes.

Authors:  I Ruberti; A Worcel
Journal:  J Mol Biol       Date:  1986-06-05       Impact factor: 5.469

3.  Binding of transcription factor TFIID to the major late promoter during in vitro nucleosome assembly potentiates subsequent initiation by RNA polymerase II.

Authors:  J L Workman; R G Roeder
Journal:  Cell       Date:  1987-11-20       Impact factor: 41.582

4.  High mobility group proteins 1 and 2 stimulate transcription in vitro by RNA polymerases II and III.

Authors:  D J Tremethick; P L Molloy
Journal:  J Biol Chem       Date:  1986-05-25       Impact factor: 5.157

5.  The role of DNA-mediated transfer of TFIIIA in the concerted gyration and differential activation of the Xenopus 5S RNA genes.

Authors:  E B Kmiec; F Razvi; A Worcel
Journal:  Cell       Date:  1986-04-25       Impact factor: 41.582

6.  Nucleosome assembly.

Authors:  R A Laskey; W C Earnshaw
Journal:  Nature       Date:  1980-08-21       Impact factor: 49.962

7.  Transcriptionally inactive oocyte-type 5S RNA genes of Xenopus laevis are complexed with TFIIIA in vitro.

Authors:  L J Peck; L Millstein; P Eversole-Cire; J M Gottesfeld; A Varshavsky
Journal:  Mol Cell Biol       Date:  1987-10       Impact factor: 4.272

8.  Sequence-specific positioning of nucleosomes over the steroid-inducible MMTV promoter.

Authors:  H Richard-Foy; G L Hager
Journal:  EMBO J       Date:  1987-08       Impact factor: 11.598

9.  Removal of positioned nucleosomes from the yeast PHO5 promoter upon PHO5 induction releases additional upstream activating DNA elements.

Authors:  A Almer; H Rudolph; A Hinnen; W Hörz
Journal:  EMBO J       Date:  1986-10       Impact factor: 11.598

10.  The positive transcription factor of the 5S RNA gene proteolyses during direct exchange between 5S DNA sites.

Authors:  E B Kmiec; A Worcel
Journal:  J Cell Biol       Date:  1986-09       Impact factor: 10.539

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  44 in total

1.  Chromatin assembly on replicating DNA in vitro.

Authors:  G Almouzni; D J Clark; M Méchali; A P Wolffe
Journal:  Nucleic Acids Res       Date:  1990-10-11       Impact factor: 16.971

2.  Heat shock-regulated transcription in vitro from a reconstituted chromatin template.

Authors:  P B Becker; S K Rabindran; C Wu
Journal:  Proc Natl Acad Sci U S A       Date:  1991-05-15       Impact factor: 11.205

3.  Cell-free system for assembly of transcriptionally repressed chromatin from Drosophila embryos.

Authors:  P B Becker; C Wu
Journal:  Mol Cell Biol       Date:  1992-05       Impact factor: 4.272

4.  Chromosomal organization of Xenopus laevis oocyte and somatic 5S rRNA genes in vivo.

Authors:  C C Chipev; A P Wolffe
Journal:  Mol Cell Biol       Date:  1992-01       Impact factor: 4.272

5.  Micromanipulation studies of chromatin fibers in Xenopus egg extracts reveal ATP-dependent chromatin assembly dynamics.

Authors:  Jie Yan; Thomas J Maresca; Dunja Skoko; Christian D Adams; Botao Xiao; Morten O Christensen; Rebecca Heald; John F Marko
Journal:  Mol Biol Cell       Date:  2006-11-15       Impact factor: 4.138

6.  Nucleosome hopping and sliding kinetics determined from dynamics of single chromatin fibers in Xenopus egg extracts.

Authors:  Padinhateeri Ranjith; Jie Yan; John F Marko
Journal:  Proc Natl Acad Sci U S A       Date:  2007-08-14       Impact factor: 11.205

7.  Histones H2A/H2B inhibit the interaction of transcription factor IIIA with the Xenopus borealis somatic 5S RNA gene in a nucleosome.

Authors:  J J Hayes; A P Wolffe
Journal:  Proc Natl Acad Sci U S A       Date:  1992-02-15       Impact factor: 11.205

8.  Human TFIIIA alone is sufficient to prevent nucleosomal repression of a homologous 5S gene.

Authors:  W Stünkel; I Kober; M Kauer; G Taimor; K H Seifart
Journal:  Nucleic Acids Res       Date:  1995-01-11       Impact factor: 16.971

9.  Minichromosome assembly accompanying repair-type DNA synthesis in Xenopus oocytes.

Authors:  M Ryoji; E Tominna; W Yasui
Journal:  Nucleic Acids Res       Date:  1989-12-25       Impact factor: 16.971

10.  Histone H1 deposition and histone-DNA interactions in replicating chromatin.

Authors:  S Bavykin; L Srebreva; T Banchev; R Tsanev; J Zlatanova; A Mirzabekov
Journal:  Proc Natl Acad Sci U S A       Date:  1993-05-01       Impact factor: 11.205

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