| Literature DB >> 31821353 |
Barbara Renate Vogler1, Michal Trinkler1, Hanna Marti2, Nicole Borel2, Theresa Pesch2, Barbara Prähauser2, Richard Hoop1, Prisca Mattmann1, Sarah Albini1.
Abstract
In Switzerland, domestic turkey meat is a niche product. Turkeys are fattened on mixed family-based farms scattered across the country, with most providing access to an uncovered outdoor pasture for the birds. Swiss fattening turkeys may therefore get infected with Chlamydiaceae via wild birds or their faeces, potentially shedding these bacteria at a later stage. The aim of the present study was to acquire baseline data about the shedding of Chlamydiaceae in clinically unremarkable Swiss fattening turkeys at slaughter, potentially exposing slaughterhouse workers to infection. In this large-scale study, 1008 cloacal swabs of Swiss turkeys out of 53 flocks from 28 different grow-out farms with uncovered outdoor pasture were collected over the course of 14 months and examined for the occurrence of Chlamydiaceae by a family-specific 23S-rRNA real-time PCR. Positive samples were further analyzed by Chlamydia psittaci (C. psittaci)-specific real-time PCR and the Arraymate DNA Microarray for species identification. All samples were negative for C. psittaci, but seven swabs out of one flock were tested positive for Chlamydia gallinacea (0.7%). Although turkeys with access to pasture may have contact with Chlamydiaceae-harbouring wild birds or their faeces, the infection rate in Swiss turkeys was shown to be low.Entities:
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Year: 2019 PMID: 31821353 PMCID: PMC6903705 DOI: 10.1371/journal.pone.0226091
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Number of cloacal swab samples from Swiss turkey farms located in seven different cantons.
Farm-ID consists of the canton where the farm is located followed by a consecutive number.
| Region | Farm-ID | Number of samples per flock |
|---|---|---|
| Western Switzerland | Berne-1 (1) | 20 |
| Berne-2 (1; 2; 3) | 19; 20; 20 | |
| Fribourg-1 (1) | 20 | |
| Fribourg-2 (1; 2)) | 20; 20 | |
| Fribourg-3 (1; 2) | 20; 20 | |
| Fribourg-4 (1) | 20 | |
| Fribourg-5 (1) | 20 | |
| Fribourg-6 (1) | 20 | |
| Fribourg-7 (1; 2) | 10; 20 | |
| Fribourg-8 (1; 2) | 10; 21 | |
| Fribourg-9 (1; 2) | 20; 20 | |
| Fribourg-10 (1; 2) | 20; 20 | |
| Fribourg-11 (1;2) | 20; 20 | |
| Vaud-1 (1; 2) | 4; 20 | |
| Vaud-2 (1; 2) | 20; 20 | |
| Eastern Switzerland | Aargau-1 (1) | 20 |
| Aargau-2 (1; 2) | 20; 20 | |
| St. Gallen-1 (1) | 20 | |
| St. Gallen-2 (1; 2) | 20; 20 | |
| St. Gallen-3 (1; 2; 3) | 21; 20; 20 | |
| St. Gallen-4 (1; 2; 3) | 5; 20; 20 | |
| St. Gallen-5 (1; 2) | 20; 20 | |
| Thurgau-1 (1; 2) | 20; 20 | |
| Thurgau-2 (1; 2; 3) | 20; 20; 20 | |
| Thurgau-3 (1) | 20 | |
| Thurgau-4 (1; 2; 3) | 20; 20, 20 | |
| Zurich-1 (1) | 20 | |
| Zurich-2 (1; 2; 3) | 20; 18; 20 | |
| Total | 28 farms / 53 flocks | 1008 |
Fig 1Hierarchical approach for the detection and identification of Chlamydiaceae in cloacal swab samples from turkeys (qPCR = quantitative PCR).
23S rRNA Chlamydiaceae qPCR-positive cloacal swab samples of turkeys at slaughter originating from flock 1 in farm Berne-1.
| sample | 23S rRNA | Arraymate Microarray | Conventional 16S rRNA gene PCR and sequencing | ||||
|---|---|---|---|---|---|---|---|
| 23S rRNA gene copies / swab | Sequencing result | 16S rRNA sequence identity [%] | GenBank accession number | ||||
| 59–3 | 0.058 | 3.20E+05 | negative | 100 | MN056016 | ||
| 59–4 | 0.0006 | 3.15E+04 | negative | 87.9 | MN056017 | ||
| 59–8 | 0.014 | 1.29E+05 | negative | 100 | MN056018 | ||
| 59–10 | 0.0066 | 3.87E+06 | negative | 100 | MN056019 | ||
| 59–16 | 0.0074 | 1.96E+06 | negative | 100 | MN056020 | ||
| 59–17 | 0.0014 | 2.73E+05 | negative | 100 | MN056021 | ||
| 59–20 | 0.0045 | 3.13E+05 | negative | 100 | MN056022 | ||
C. psittaci = Chlamydia psittaci; C. gallinacea = Chlamydia gallinacea
1Chlamydiaceae-DNA content compared to total DNA content
2The Chlamydia gallinacea-genome contains one copy of the 23S rRNA
3Compared to the nucleotide sequence of Chlamydia gallinacea strain JX-1 chromosome, complete genome (GenBank: CP019792.1)