Literature DB >> 31798197

Ion Mobility Spectrometry and the Omics: Distinguishing Isomers, Molecular Classes and Contaminant Ions in Complex Samples.

Kristin E Burnum-Johnson1, Xueyun Zheng2, James N Dodds3, Jeremy Ash3, Denis Fourches3, Carrie D Nicora1, Jason P Wendler1, Thomas O Metz1, Katrina M Waters1, Janet K Jansson1, Richard D Smith1, Erin S Baker3.   

Abstract

Ion mobility spectrometry (IMS) is a widely used analytical technique providing rapid gas phase separations. IMS alone is useful, but its coupling with mass spectrometry (IMS-MS) and various front-end separation techniques has greatly increased the molecular information achievable from different omic analyses. IMS-MS analyses are specifically gaining attention for improving metabolomic, lipidomic, glycomic, proteomic and exposomic analyses by increasing measurement sensitivity (e.g. S/N ratio), reducing the detection limit, and amplifying peak capacity. Numerous studies including national security-related analyses, disease screenings and environmental evaluations are illustrating that IMS-MS is able to extract information not possible with MS alone. Furthermore, IMS-MS has shown great utility in salvaging molecular information for low abundance molecules of interest when high concentration contaminant ions are present in the sample by reducing detector suppression. This review highlights how IMS-MS is currently being used in omic analyses to distinguish structurally similar molecules, isomers, molecular classes and contaminant ions.

Entities:  

Keywords:  Exposomics; Glycomics; Ion Mobility Spectrometry; Lipidomics; Mass Spectrometry; Metabolomics; Omics; Proteomics

Year:  2019        PMID: 31798197      PMCID: PMC6887105          DOI: 10.1016/j.trac.2019.04.022

Source DB:  PubMed          Journal:  Trends Analyt Chem        ISSN: 0165-9936            Impact factor:   12.296


  67 in total

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Authors:  Xiaoyun Liu; Manolo Plasencia; Susanne Ragg; Stephen J Valentine; David E Clemmer
Journal:  Brief Funct Genomic Proteomic       Date:  2004-08

2.  High Resolution Separations and Improved Ion Production and Transmission in Metabolomics.

Authors:  Thomas O Metz; Jason S Page; Erin S Baker; Keqi Tang; Jie Ding; Yufeng Shen; Richard D Smith
Journal:  Trends Analyt Chem       Date:  2008-03       Impact factor: 12.296

3.  Enhancing bottom-up and top-down proteomic measurements with ion mobility separations.

Authors:  Erin Shammel Baker; Kristin E Burnum-Johnson; Yehia M Ibrahim; Daniel J Orton; Matthew E Monroe; Ryan T Kelly; Ronald J Moore; Xing Zhang; Roger Théberge; Catherine E Costello; Richard D Smith
Journal:  Proteomics       Date:  2015-07-03       Impact factor: 3.984

4.  Characterizing oligosaccharides using injected-ion mobility/mass spectrometry.

Authors:  Y Liu; D E Clemmer
Journal:  Anal Chem       Date:  1997-07-01       Impact factor: 6.986

Review 5.  The power of ion mobility-mass spectrometry for structural characterization and the study of conformational dynamics.

Authors:  Francesco Lanucara; Stephen W Holman; Christopher J Gray; Claire E Eyers
Journal:  Nat Chem       Date:  2014-04       Impact factor: 24.427

6.  Evaluating lipid mediator structural complexity using ion mobility spectrometry combined with mass spectrometry.

Authors:  Jennifer E Kyle; Noor Aly; Xueyun Zheng; Kristin E Burnum-Johnson; Richard D Smith; Erin S Baker
Journal:  Bioanalysis       Date:  2018-03-01       Impact factor: 2.681

7.  Discrimination of Isomeric Carbohydrates as the Electron Transfer Products of Group II Cation Adducts by Ion Mobility Spectrometry and Tandem Mass Spectrometry.

Authors:  Yuting Huang; Eric D Dodds
Journal:  Anal Chem       Date:  2015-05-20       Impact factor: 6.986

8.  Multi-platform 'Omics Analysis of Human Ebola Virus Disease Pathogenesis.

Authors:  Amie J Eisfeld; Peter J Halfmann; Jason P Wendler; Jennifer E Kyle; Kristin E Burnum-Johnson; Zuleyma Peralta; Tadashi Maemura; Kevin B Walters; Tokiko Watanabe; Satoshi Fukuyama; Makoto Yamashita; Jon M Jacobs; Young-Mo Kim; Cameron P Casey; Kelly G Stratton; Bobbie-Jo M Webb-Robertson; Marina A Gritsenko; Matthew E Monroe; Karl K Weitz; Anil K Shukla; Mingyuan Tian; Gabriele Neumann; Jennifer L Reed; Harm van Bakel; Thomas O Metz; Richard D Smith; Katrina M Waters; Alhaji N'jai; Foday Sahr; Yoshihiro Kawaoka
Journal:  Cell Host Microbe       Date:  2017-11-16       Impact factor: 21.023

9.  LipidCCS: Prediction of Collision Cross-Section Values for Lipids with High Precision To Support Ion Mobility-Mass Spectrometry-Based Lipidomics.

Authors:  Zhiwei Zhou; Jia Tu; Xin Xiong; Xiaotao Shen; Zheng-Jiang Zhu
Journal:  Anal Chem       Date:  2017-08-15       Impact factor: 6.986

10.  Discrimination of epimeric glycans and glycopeptides using IM-MS and its potential for carbohydrate sequencing.

Authors:  P Both; A P Green; C J Gray; R Sardzík; J Voglmeir; C Fontana; M Austeri; M Rejzek; D Richardson; R A Field; G Widmalm; S L Flitsch; C E Eyers
Journal:  Nat Chem       Date:  2013-12-08       Impact factor: 24.427

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  9 in total

1.  Spatial Metabolomics and Imaging Mass Spectrometry in the Age of Artificial Intelligence.

Authors:  Theodore Alexandrov
Journal:  Annu Rev Biomed Data Sci       Date:  2020-04-13

2.  Insights and prospects for ion mobility-mass spectrometry in clinical chemistry.

Authors:  David C Koomen; Jody C May; John A McLean
Journal:  Expert Rev Proteomics       Date:  2022-01-17       Impact factor: 3.940

3.  Analysis of per- and polyfluoroalkyl substances in Houston Ship Channel and Galveston Bay following a large-scale industrial fire using ion-mobility-spectrometry-mass spectrometry.

Authors:  Alan Valdiviezo; Noor A Aly; Yu-Syuan Luo; Alexandra Cordova; Gaston Casillas; MaKayla Foster; Erin S Baker; Ivan Rusyn
Journal:  J Environ Sci (China)       Date:  2021-08-22       Impact factor: 5.565

Review 4.  Mass Spectrometry-Based Techniques to Elucidate the Sugar Code.

Authors:  Márkó Grabarics; Maike Lettow; Carla Kirschbaum; Kim Greis; Christian Manz; Kevin Pagel
Journal:  Chem Rev       Date:  2021-09-07       Impact factor: 72.087

5.  Ion mobility collision cross-section atlas for known and unknown metabolite annotation in untargeted metabolomics.

Authors:  Zhiwei Zhou; Mingdu Luo; Xi Chen; Yandong Yin; Xin Xiong; Ruohong Wang; Zheng-Jiang Zhu
Journal:  Nat Commun       Date:  2020-08-28       Impact factor: 14.919

6.  Moisture modulates soil reservoirs of active DNA and RNA viruses.

Authors:  Ruonan Wu; Michelle R Davison; Yuqian Gao; Carrie D Nicora; Jason E Mcdermott; Kristin E Burnum-Johnson; Kirsten S Hofmockel; Janet K Jansson
Journal:  Commun Biol       Date:  2021-08-26

7.  Rapid cyclic ion mobility separations of monosaccharide building blocks as a first step toward a high-throughput reaction screening platform for carbohydrate syntheses.

Authors:  Tyler L Peterson; Gabe Nagy
Journal:  RSC Adv       Date:  2021-12-14       Impact factor: 4.036

8.  Potential of Single Pulse and Multiplexed Drift-Tube Ion Mobility Spectrometry Coupled to Micropillar Array Column for Proteomics Studies.

Authors:  Cindy Nix; Gael Cobraiville; Marie-Jia Gou; Marianne Fillet
Journal:  Int J Mol Sci       Date:  2022-07-06       Impact factor: 6.208

9.  Collision Cross-Section Calibration Strategy for Lipid Measurements in SLIM-Based High-Resolution Ion Mobility.

Authors:  Bailey S Rose; Jody C May; Allison R Reardon; John A McLean
Journal:  J Am Soc Mass Spectrom       Date:  2022-06-02       Impact factor: 3.262

  9 in total

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