Literature DB >> 24651194

The power of ion mobility-mass spectrometry for structural characterization and the study of conformational dynamics.

Francesco Lanucara1, Stephen W Holman1, Christopher J Gray2, Claire E Eyers1.   

Abstract

Mass spectrometry is a vital tool for molecular characterization, and the allied technique of ion mobility is enhancing many areas of (bio)chemical analysis. Strong synergy arises between these two techniques because of their ability to ascertain complementary information about gas-phase ions. Ion mobility separates ions (from small molecules up to megadalton protein complexes) based on their differential mobility through a buffer gas. Ion mobility-mass spectrometry (IM-MS) can thus act as a tool to separate complex mixtures, to resolve ions that may be indistinguishable by mass spectrometry alone, or to determine structural information (for example rotationally averaged cross-sectional area), complementary to more traditional structural approaches. Finally, IM-MS can be used to gain insights into the conformational dynamics of a system, offering a unique means of characterizing flexibility and folding mechanisms. This Review critically describes how IM-MS has been used to enhance various areas of chemical and biophysical analysis.

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Year:  2014        PMID: 24651194     DOI: 10.1038/nchem.1889

Source DB:  PubMed          Journal:  Nat Chem        ISSN: 1755-4330            Impact factor:   24.427


  133 in total

1.  Conformation of polyalanine and polyglycine dications in the gas phase: insight from ion mobility spectrometry and replica-exchange molecular dynamics.

Authors:  Florian Albrieux; Florent Calvo; Fabien Chirot; Aleksey Vorobyev; Yury O Tsybin; Valéria Lepère; Rodolphe Antoine; Jérôme Lemoine; Philippe Dugourd
Journal:  J Phys Chem A       Date:  2010-07-01       Impact factor: 2.781

2.  Accelerated high-resolution differential ion mobility separations using hydrogen.

Authors:  Alexandre A Shvartsburg; Richard D Smith
Journal:  Anal Chem       Date:  2011-11-10       Impact factor: 6.986

3.  Structural characterization of drug-like compounds by ion mobility mass spectrometry: comparison of theoretical and experimentally derived nitrogen collision cross sections.

Authors:  Iain Campuzano; Matthew F Bush; Carol V Robinson; Claire Beaumont; Keith Richardson; Hyungjun Kim; Hugh I Kim
Journal:  Anal Chem       Date:  2011-12-27       Impact factor: 6.986

4.  A novel method for the determination of the site of glucuronidation by ion mobility spectrometry-mass spectrometry.

Authors:  Atsushi Shimizu; Tomoyuki Ohe; Masato Chiba
Journal:  Drug Metab Dispos       Date:  2012-05-18       Impact factor: 3.922

5.  Oxytocin-receptor binding: why divalent metals are essential.

Authors:  Dengfeng Liu; Alexandra B Seuthe; Oli T Ehrler; Xiaohua Zhang; Thomas Wyttenbach; Jeffrey F Hsu; Michael T Bowers
Journal:  J Am Chem Soc       Date:  2005-02-23       Impact factor: 15.419

6.  Evidence for α-helices in the gas phase: a case study using Melittin from honey bee venom.

Authors:  Hannah V Florance; Andrew P Stopford; Jason M Kalapothakis; Bryan J McCullough; Andrew Bretherick; Perdita E Barran
Journal:  Analyst       Date:  2011-06-24       Impact factor: 4.616

7.  Detection of a protein conformational equilibrium by electrospray ionisation-ion mobility-mass spectrometry.

Authors:  Matthew Jenner; Jacqueline Ellis; Wei-Cheng Huang; Emma Lloyd Raven; Gordon C K Roberts; Neil J Oldham
Journal:  Angew Chem Int Ed Engl       Date:  2011-06-17       Impact factor: 15.336

8.  Improvement of phosphoproteome analyses using FAIMS and decision tree fragmentation. application to the insulin signaling pathway in Drosophila melanogaster S2 cells.

Authors:  Gaëlle Bridon; Eric Bonneil; Tara Muratore-Schroeder; Olivier Caron-Lizotte; Pierre Thibault
Journal:  J Proteome Res       Date:  2011-12-01       Impact factor: 4.466

9.  High-resolution ion cyclotron mobility spectrometry.

Authors:  Samuel I Merenbloom; Rebecca S Glaskin; Zachary B Henson; David E Clemmer
Journal:  Anal Chem       Date:  2009-02-15       Impact factor: 6.986

10.  Assessing the dynamic range and peak capacity of nanoflow LC-FAIMS-MS on an ion trap mass spectrometer for proteomics.

Authors:  Jesse D Canterbury; Xianhua Yi; Michael R Hoopmann; Michael J MacCoss
Journal:  Anal Chem       Date:  2008-08-12       Impact factor: 6.986

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  191 in total

1.  Structural Elucidation of cis/trans Dicaffeoylquinic Acid Photoisomerization Using Ion Mobility Spectrometry-Mass Spectrometry.

Authors:  Xueyun Zheng; Ryan S Renslow; Mpho M Makola; Ian K Webb; Liulin Deng; Dennis G Thomas; Niranjan Govind; Yehia M Ibrahim; Mwadham M Kabanda; Ian A Dubery; Heino M Heyman; Richard D Smith; Ntakadzeni E Madala; Erin S Baker
Journal:  J Phys Chem Lett       Date:  2017-03-15       Impact factor: 6.475

2.  Multiple gas-phase conformations of proline-containing peptides: is it always cis/trans isomerization?

Authors:  Christopher B Lietz; Zhengwei Chen; Chang Yun Son; Xueqin Pang; Qiang Cui; Lingjun Li
Journal:  Analyst       Date:  2016-08-02       Impact factor: 4.616

3.  Lipids modulate the conformational dynamics of a secondary multidrug transporter.

Authors:  Chloé Martens; Richard A Stein; Matthieu Masureel; Aurélie Roth; Smriti Mishra; Rosie Dawaliby; Albert Konijnenberg; Frank Sobott; Cédric Govaerts; Hassane S Mchaourab
Journal:  Nat Struct Mol Biol       Date:  2016-07-11       Impact factor: 15.369

4.  Subresidue-Resolution Footprinting of Ligand-Protein Interactions by Carbene Chemistry and Ion Mobility-Mass Spectrometry.

Authors:  Gaoyuan Lu; Xiaowei Xu; Gongyu Li; Huiyong Sun; Nian Wang; Yinxue Zhu; Ning Wan; Yatao Shi; Guangji Wang; Lingjun Li; Haiping Hao; Hui Ye
Journal:  Anal Chem       Date:  2019-12-11       Impact factor: 6.986

5.  Interpreting the Collision Cross Sections of Native-like Protein Ions: Insights from Cation-to-Anion Proton-Transfer Reactions.

Authors:  Kenneth J Laszlo; Matthew F Bush
Journal:  Anal Chem       Date:  2017-07-07       Impact factor: 6.986

6.  Ion Mobility Spectrometry - High Resolution LTQ-Orbitrap Mass Spectrometry for Analysis of Homemade Explosives.

Authors:  Nathan Hagan; Ilana Goldberg; Adam Graichen; Amanda St Jean; Ching Wu; David Lawrence; Plamen Demirev
Journal:  J Am Soc Mass Spectrom       Date:  2017-04-13       Impact factor: 3.109

7.  Characterization of hydrogen bonding motifs in proteins: hydrogen elimination monitoring by ultraviolet photodissociation mass spectrometry.

Authors:  Lindsay J Morrison; Wenrui Chai; Jake A Rosenberg; Graeme Henkelman; Jennifer S Brodbelt
Journal:  Phys Chem Chem Phys       Date:  2017-08-02       Impact factor: 3.676

8.  Determining the Effect of Catechins on SOD1 Conformation and Aggregation by Ion Mobility Mass Spectrometry Combined with Optical Spectroscopy.

Authors:  Bing Zhao; Xiaoyu Zhuang; Zifeng Pi; Shu Liu; Zhiqiang Liu; Fengrui Song
Journal:  J Am Soc Mass Spectrom       Date:  2018-02-01       Impact factor: 3.109

9.  Gas-Phase Analysis of the Complex of Fibroblast GrowthFactor 1 with Heparan Sulfate: A Traveling Wave Ion Mobility Spectrometry (TWIMS) and Molecular Modeling Study.

Authors:  Yuejie Zhao; Arunima Singh; Yongmei Xu; Chengli Zong; Fuming Zhang; Geert-Jan Boons; Jian Liu; Robert J Linhardt; Robert J Woods; I Jonathan Amster
Journal:  J Am Soc Mass Spectrom       Date:  2016-09-23       Impact factor: 3.109

Review 10.  Untargeted Metabolomics Strategies-Challenges and Emerging Directions.

Authors:  Alexandra C Schrimpe-Rutledge; Simona G Codreanu; Stacy D Sherrod; John A McLean
Journal:  J Am Soc Mass Spectrom       Date:  2016-09-13       Impact factor: 3.109

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