Literature DB >> 3178743

Structure of a full-length cDNA clone for the prepro alpha 1(I) chain of human type I procollagen.

G Tromp1, H Kuivaniemi, A Stacey, H Shikata, C T Baldwin, R Jaenisch, D J Prockop.   

Abstract

A full-length cDNA clone for the human prepro alpha 1(I) chain of type I procollagen was characterized. Nucleotide sequencing of the first 1500 nucleotide residues of the 5'-end of the cDNA clone provided 729 nucleotide residues and the codons for 243 amino acid residues not previously defined from any species. The data made it possible, for the first time, to compare completely codon usage for the human alpha 1(I) and alpha 2(I) chains.

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Year:  1988        PMID： 3178743      PMCID： PMC1149391          DOI： 10.1042/bj2530919

Source DB:  PubMed          Journal:  Biochem J        ISSN： 0264-6021            Impact factor:   3.857


  14 in total

1.  Structure of a full-length cDNA clone for the prepro alpha 2(I) chain of human type I procollagen. Comparison with the chicken gene confirms unusual patterns of gene conservation.

Authors:  H Kuivaniemi; G Tromp; M L Chu; D J Prockop
Journal:  Biochem J       Date:  1988-06-15       Impact factor: 3.857

2.  Fine structural analysis of the human pro-alpha 1 (I) collagen gene. Promoter structure, AluI repeats, and polymorphic transcripts.

Authors:  M L Chu; W de Wet; M Bernard; F Ramirez
Journal:  J Biol Chem       Date:  1985-02-25       Impact factor: 5.157

3.  Cloning and characterization of five overlapping cDNAs specific for the human pro alpha 1(I) collagen chain.

Authors:  M L Chu; J C Myers; M P Bernard; J F Ding; F Ramirez
Journal:  Nucleic Acids Res       Date:  1982-10-11       Impact factor: 16.971

4.  New M13 vectors for cloning.

Authors:  J Messing
Journal:  Methods Enzymol       Date:  1983       Impact factor: 1.600

5.  A simple and rapid nucleotide sequencing strategy and its application in analyzing a rice histone 3 gene.

Authors:  Z G Peng; R Wu
Journal:  Gene       Date:  1986       Impact factor: 3.688

6.  Human pro alpha 1(I) collagen gene structure reveals evolutionary conservation of a pattern of introns and exons.

Authors:  M L Chu; W de Wet; M Bernard; J F Ding; M Morabito; J Myers; C Williams; F Ramirez
Journal:  Nature       Date:  1984 Jul 26-Aug 1       Impact factor: 49.962

7.  Insertion of retrovirus into the first intron of alpha 1(I) collagen gene to embryonic lethal mutation in mice.

Authors:  K Harbers; M Kuehn; H Delius; R Jaenisch
Journal:  Proc Natl Acad Sci U S A       Date:  1984-03       Impact factor: 11.205

8.  Structure of a cDNA for the pro alpha 2 chain of human type I procollagen. Comparison with chick cDNA for pro alpha 2(I) identifies structurally conserved features of the protein and the gene.

Authors:  M P Bernard; J C Myers; M L Chu; F Ramirez; E F Eikenberry; D J Prockop
Journal:  Biochemistry       Date:  1983-03-01       Impact factor: 3.162

9.  Nucleotide sequences of complementary deoxyribonucleic acids for the pro alpha 1 chain of human type I procollagen. Statistical evaluation of structures that are conserved during evolution.

Authors:  M P Bernard; M L Chu; J C Myers; F Ramirez; E F Eikenberry; D J Prockop
Journal:  Biochemistry       Date:  1983-10-25       Impact factor: 3.162

10.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205
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  17 in total

1.  Lack of a phenotype in transgenic mice aberrantly expressing COL2A1 mRNA because of highly selective post-transcriptional down-regulation.

Authors:  C M Yuan; L Ala-Kokko; D Le Guellec; S Franc; A Fertala; J S Khillan; B P Sokolov; D J Prockop
Journal:  Biochem J       Date:  2000-01-15       Impact factor: 3.857

2.  [Topical application of vitamins, phytosterols and ceramides. Protection against increased expression of interstital collagenase and reduced collagen-I expression after single exposure to UVA irradiation].

Authors:  S Grether-Beck; K Mühlberg; H Brenden; J Krutmann
Journal:  Hautarzt       Date:  2008-07       Impact factor: 0.751

3.  Defining the domains of type I collagen involved in heparin- binding and endothelial tube formation.

Authors:  S M Sweeney; C A Guy; G B Fields; J D San Antonio
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-23       Impact factor: 11.205

4.  Structure of cDNA clones coding for human type II procollagen. The alpha 1(II) chain is more similar to the alpha 1(I) chain than two other alpha chains of fibrillar collagens.

Authors:  C T Baldwin; A M Reginato; C Smith; S A Jimenez; D J Prockop
Journal:  Biochem J       Date:  1989-09-01       Impact factor: 3.857

5.  Domain-Specific Proteogenomic Analysis of Collagens to Evaluate De Novo Sequencing Results and Database Information.

Authors:  Anne J Kleinnijenhuis; Frédérique L van Holthoon
Journal:  J Mol Evol       Date:  2018-05-02       Impact factor: 2.395

6.  Mild dominant osteogenesis imperfecta with intrafamilial variability: the cause is a serine for glycine alpha 1(I) 901 substitution in a type-I collagen gene.

Authors:  M Mottes; A Sangalli; M Valli; M Gomez Lira; R Tenni; P Buttitta; P F Pignatti; G Cetta
Journal:  Hum Genet       Date:  1992-07       Impact factor: 4.132

7.  Substitution of cysteine for glycine-alpha 1-691 in the pro alpha 1(I) chain of type I procollagen in a proband with lethal osteogenesis imperfecta destabilizes the triple helix at a site C-terminal to the substitution.

Authors:  B Steinmann; A Westerhausen; C D Constantinou; A Superti-Furga; D J Prockop
Journal:  Biochem J       Date:  1991-11-01       Impact factor: 3.857

8.  Natural variation in four human collagen genes across an ethnically diverse population.

Authors:  Ting-Fung Chan; Annie Poon; Analabha Basu; Nick R Addleman; Justin Chen; Angie Phong; Peter H Byers; Teri E Klein; Pui-Yan Kwok
Journal:  Genomics       Date:  2008-02-12       Impact factor: 5.736

9.  Glycation changes the charge distribution of type I collagen fibrils.

Authors:  J C Hadley; K M Meek; N S Malik
Journal:  Glycoconj J       Date:  1998-08       Impact factor: 2.916

10.  A 5' splice site mutation affecting the pre-mRNA splicing of two upstream exons in the collagen COL1A1 gene. Exon 8 skipping and altered definition of exon 7 generates truncated pro alpha 1(I) chains with a non-collagenous insertion destabilizing the triple helix.

Authors:  J F Bateman; D Chan; I Moeller; M Hannagan; W G Cole
Journal:  Biochem J       Date:  1994-09-15       Impact factor: 3.857
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