Literature DB >> 6462220

Human pro alpha 1(I) collagen gene structure reveals evolutionary conservation of a pattern of introns and exons.

M L Chu, W de Wet, M Bernard, J F Ding, M Morabito, J Myers, C Williams, F Ramirez.   

Abstract

The collagens represent an interesting example of a structurally related but genetically distinct family of proteins. Type I, the most abundant of the vertebrate collagens, comprises two pro alpha 1(I) chains and one pro alpha 2(I) chain, each containing terminal propeptides and a central domain of 338 (Gly, X, Y) repeats. The structure of the chicken pro alpha 2(I) gene shows an intriguing relationship between exon organization and the arrangement of (Gly, X, Y) repeats (see ref. 2 for review). This has led to the suggestion that the collagens evolved from a common ancestral unit of 54 base pairs (bp). Here we present the structure of the entire human pro alpha 1(I) gene and compare this with the chicken pro alpha 2(I). The exon arrangement of the two genes is remarkably similar, although the human pro alpha 1(I) is more compact because of the shorter length of its introns. The data strongly support the notion that the type I genes have evolved from an ancestral multi-exon unit, and that once the gene was translated, a strong evolutionary pressure caused it to maintain this elaborate structure.

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Year:  1984        PMID: 6462220     DOI: 10.1038/310337a0

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  40 in total

1.  Evolution of collagen IV genes from a 54-base pair exon: a role for introns in gene evolution.

Authors:  G Butticè; P Kaytes; J D'Armiento; G Vogeli; M Kurkinen
Journal:  J Mol Evol       Date:  1990-06       Impact factor: 2.395

2.  Isolation and partial characterization of the entire human pro alpha 1(II) collagen gene.

Authors:  F O Sangiorgi; V Benson-Chanda; W J de Wet; M E Sobel; P Tsipouras; F Ramirez
Journal:  Nucleic Acids Res       Date:  1985-04-11       Impact factor: 16.971

3.  Two new polymorphic markers in the human pro alpha 2(1) collagen gene.

Authors:  D K Brebner; A F Grobler-Rabie; A J Bester; C G Mathew; C D Boyd
Journal:  Hum Genet       Date:  1985       Impact factor: 4.132

4.  Chromosomal assignments of the genes coding for human types II, III, and IV collagen: a dispersed gene family.

Authors:  E Solomon; L R Hiorns; N Spurr; M Kurkinen; D Barlow; B L Hogan; R Dalgleish
Journal:  Proc Natl Acad Sci U S A       Date:  1985-05       Impact factor: 11.205

5.  Control of types I and II collagen and fibronectin gene expression in chondrocytes delineated by viral transformation.

Authors:  E S Allebach; D Boettiger; M Pacifici; S L Adams
Journal:  Mol Cell Biol       Date:  1985-05       Impact factor: 4.272

6.  Molecular cloning and characterization of the complementary DNA and gene coding for the B-chain of subcomponent C1q of the human complement system.

Authors:  K B Reid
Journal:  Biochem J       Date:  1985-11-01       Impact factor: 3.857

7.  Large introns in the 3' end of the gene for the pro alpha 1 (IV) chain of human basement membrane collagen.

Authors:  R Soininen; L Tikka; L Chow; T Pihlajaniemi; M Kurkinen; D J Prockop; C D Boyd; K Tryggvason
Journal:  Proc Natl Acad Sci U S A       Date:  1986-03       Impact factor: 11.205

8.  Exon/intron organization of the chicken type II procollagen gene: intron size distribution suggests a minimal intron size.

Authors:  W B Upholt; L J Sandell
Journal:  Proc Natl Acad Sci U S A       Date:  1986-04       Impact factor: 11.205

Review 9.  Prenatal diagnosis and prevention of inherited abnormalities of collagen.

Authors:  F M Pope; S C Daw; P Narcisi; A R Richards; A C Nicholls
Journal:  J Inherit Metab Dis       Date:  1989       Impact factor: 4.982

10.  Structure of a full-length cDNA clone for the prepro alpha 1(I) chain of human type I procollagen.

Authors:  G Tromp; H Kuivaniemi; A Stacey; H Shikata; C T Baldwin; R Jaenisch; D J Prockop
Journal:  Biochem J       Date:  1988-08-01       Impact factor: 3.857

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