Literature DB >> 31780561

Watching helical membrane proteins fold reveals a common N-to-C-terminal folding pathway.

Hyun-Kyu Choi1,2,3, Duyoung Min4,5, Hyunook Kang2, Min Ju Shon2,3, Sang-Hyun Rah1,2,3, Hak Chan Kim2, Hawoong Jeong1, Hee-Jung Choi6, James U Bowie7, Tae-Young Yoon6,3.   

Abstract

To understand membrane protein biogenesis, we need to explore folding within a bilayer context. Here, we describe a single-molecule force microscopy technique that monitors the folding of helical membrane proteins in vesicle and bicelle environments. After completely unfolding the protein at high force, we lower the force to initiate folding while transmembrane helices are aligned in a zigzag manner within the bilayer, thereby imposing minimal constraints on folding. We used the approach to characterize the folding pathways of the n class="Species">Escherichia coli rhomboid protease GlpG and the human β2-adrenergic receptor. Despite their evolutionary distance, both proteins fold in a strict N-to-C-terminal fashion, accruing structures in units of helical hairpins. These common features suggest that integral helical membrane proteins have evolved to maximize their fitness with cotranslational folding.
Copyright © 2019 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

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Year:  2019        PMID: 31780561      PMCID: PMC7382370          DOI: 10.1126/science.aaw8208

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  60 in total

1.  Locating the barrier for folding of single molecules under an external force.

Authors:  Olga K Dudko; Thomas G W Graham; Robert B Best
Journal:  Phys Rev Lett       Date:  2011-11-07       Impact factor: 9.161

Review 2.  Lipid-Assisted Membrane Protein Folding and Topogenesis.

Authors:  William Dowhan; Heidi Vitrac; Mikhail Bogdanov
Journal:  Protein J       Date:  2019-06       Impact factor: 2.371

3.  Elasticity of short DNA molecules: theory and experiment for contour lengths of 0.6-7 microm.

Authors:  Yeonee Seol; Jinyu Li; Philip C Nelson; Thomas T Perkins; M D Betterton
Journal:  Biophys J       Date:  2007-08-31       Impact factor: 4.033

4.  Hidden dynamics in the unfolding of individual bacteriorhodopsin proteins.

Authors:  Hao Yu; Matthew G W Siewny; Devin T Edwards; Aric W Sanders; Thomas T Perkins
Journal:  Science       Date:  2017-03-03       Impact factor: 47.728

5.  A simple DNA handle attachment method for single molecule mechanical manipulation experiments.

Authors:  Duyoung Min; Mark A Arbing; Robert E Jefferson; James U Bowie
Journal:  Protein Sci       Date:  2016-06-06       Impact factor: 6.725

6.  Dynamic membrane topology in an unassembled membrane protein.

Authors:  Maximilian Seurig; Moira Ek; Gunnar von Heijne; Nir Fluman
Journal:  Nat Chem Biol       Date:  2019-09-09       Impact factor: 15.040

7.  Crystal structure of the human beta2 adrenergic G-protein-coupled receptor.

Authors:  Søren G F Rasmussen; Hee-Jung Choi; Daniel M Rosenbaum; Tong Sun Kobilka; Foon Sun Thian; Patricia C Edwards; Manfred Burghammer; Venkata R P Ratnala; Ruslan Sanishvili; Robert F Fischetti; Gebhard F X Schertler; William I Weis; Brian K Kobilka
Journal:  Nature       Date:  2007-10-21       Impact factor: 49.962

Review 8.  Mechanisms of integral membrane protein insertion and folding.

Authors:  Florian Cymer; Gunnar von Heijne; Stephen H White
Journal:  J Mol Biol       Date:  2014-09-30       Impact factor: 5.469

9.  Sec17/Sec18 act twice, enhancing membrane fusion and then disassembling cis-SNARE complexes.

Authors:  Hongki Song; Amy Orr; Mengtong Duan; Alexey J Merz; William Wickner
Journal:  Elife       Date:  2017-07-18       Impact factor: 8.140

10.  Architectural and thermodynamic principles underlying intramembrane protease function.

Authors:  Rosanna P Baker; Sinisa Urban
Journal:  Nat Chem Biol       Date:  2012-07-15       Impact factor: 15.040

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  17 in total

1.  Observing the nonvectorial yet cotranslational folding of a multidomain protein, LDL receptor, in the ER of mammalian cells.

Authors:  Hiroshi Kadokura; Yui Dazai; Yo Fukuda; Naoya Hirai; Orie Nakamura; Kenji Inaba
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-29       Impact factor: 11.205

Review 2.  How bilayer properties influence membrane protein folding.

Authors:  Karolina Corin; James U Bowie
Journal:  Protein Sci       Date:  2020-10-24       Impact factor: 6.725

3.  Free-energy changes of bacteriorhodopsin point mutants measured by single-molecule force spectroscopy.

Authors:  David R Jacobson; Thomas T Perkins
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-30       Impact factor: 11.205

Review 4.  How physical forces drive the process of helical membrane protein folding.

Authors:  Karolina Corin; James U Bowie
Journal:  EMBO Rep       Date:  2022-02-08       Impact factor: 8.807

5.  Single-molecule manipulation of macromolecules on GUV or SUV membranes using optical tweezers.

Authors:  Yukun Wang; Avinash Kumar; Huaizhou Jin; Yongli Zhang
Journal:  Biophys J       Date:  2021-11-20       Impact factor: 4.033

Review 6.  Untangling the complexity of membrane protein folding.

Authors:  Heedeok Hong; Hyun-Kyu Choi; Tae-Young Yoon
Journal:  Curr Opin Struct Biol       Date:  2022-01-05       Impact factor: 7.786

7.  Extreme parsimony in ATP consumption by 20S complexes in the global disassembly of single SNARE complexes.

Authors:  Changwon Kim; Min Ju Shon; Sung Hyun Kim; Gee Sung Eun; Je-Kyung Ryu; Changbong Hyeon; Reinhard Jahn; Tae-Young Yoon
Journal:  Nat Commun       Date:  2021-05-28       Impact factor: 14.919

Review 8.  Evolution, folding, and design of TIM barrels and related proteins.

Authors:  Sergio Romero-Romero; Sina Kordes; Florian Michel; Birte Höcker
Journal:  Curr Opin Struct Biol       Date:  2021-01-13       Impact factor: 6.809

Review 9.  Membrane proteins enter the fold.

Authors:  Dagan C Marx; Karen G Fleming
Journal:  Curr Opin Struct Biol       Date:  2021-05-08       Impact factor: 7.786

10.  Facile tethering of stable and unstable proteins for optical tweezers experiments.

Authors:  Kevin Maciuba; Fan Zhang; Christian M Kaiser
Journal:  Biophys J       Date:  2021-05-12       Impact factor: 3.699

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