Literature DB >> 25277655

Mechanisms of integral membrane protein insertion and folding.

Florian Cymer1, Gunnar von Heijne1,2, Stephen H White3.   

Abstract

The biogenesis, folding, and structure of α-helical membrane proteins (MPs) are important to understand because they underlie virtually all physiological processes in cells including key metabolic pathways, such as the respiratory chain and the photosystems, as well as the transport of solutes and signals across membranes. Nearly all MPs require translocons--often referred to as protein-conducting channels--for proper insertion into their target membrane. Remarkable progress toward understanding the structure and functioning of translocons has been made during the past decade. Here, we review and assess this progress critically. All available evidence indicates that MPs are equilibrium structures that achieve their final structural states by folding along thermodynamically controlled pathways. The main challenge for cells is the targeting and membrane insertion of highly hydrophobic amino acid sequences. Targeting and insertion are managed in cells principally by interactions between ribosomes and membrane-embedded translocons. Our review examines the biophysical and biological boundaries of MP insertion and the folding of polytopic MPs in vivo. A theme of the review is the under-appreciated role of basic thermodynamic principles in MP folding and assembly. Thermodynamics not only dictates the final folded structure but also is the driving force for the evolution of the ribosome-translocon system of assembly. We conclude the review with a perspective suggesting a new view of translocon-guided MP insertion.
Copyright © 2014 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  lipid–protein interactions; membrane protein biogenesis; membrane protein folding; transmembrane helix

Mesh:

Substances:

Year:  2014        PMID: 25277655      PMCID: PMC4339636          DOI: 10.1016/j.jmb.2014.09.014

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  159 in total

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Authors:  S U Heinrich; W Mothes; J Brunner; T A Rapoport
Journal:  Cell       Date:  2000-07-21       Impact factor: 41.582

2.  A putative molecular-activation switch in the transmembrane domain of erbB2.

Authors:  Sarel J Fleishman; Joseph Schlessinger; Nir Ben-Tal
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-02       Impact factor: 11.205

3.  Sequence specificity in the dimerization of transmembrane alpha-helices.

Authors:  M A Lemmon; J M Flanagan; H R Treutlein; J Zhang; D M Engelman
Journal:  Biochemistry       Date:  1992-12-29       Impact factor: 3.162

4.  Conformational states of melittin at a bilayer interface.

Authors:  Magnus Andersson; Jakob P Ulmschneider; Martin B Ulmschneider; Stephen H White
Journal:  Biophys J       Date:  2013-03-19       Impact factor: 4.033

5.  In silico partitioning and transmembrane insertion of hydrophobic peptides under equilibrium conditions.

Authors:  Jakob P Ulmschneider; Jeremy C Smith; Stephen H White; Martin B Ulmschneider
Journal:  J Am Chem Soc       Date:  2011-09-14       Impact factor: 15.419

6.  Electrostatic interactions in an integral membrane protein.

Authors:  E T Johnson; W W Parson
Journal:  Biochemistry       Date:  2002-05-21       Impact factor: 3.162

7.  Membrane partitioning: distinguishing bilayer effects from the hydrophobic effect.

Authors:  W C Wimley; S H White
Journal:  Biochemistry       Date:  1993-06-29       Impact factor: 3.162

8.  The hydrophobic core of the Sec61 translocon defines the hydrophobicity threshold for membrane integration.

Authors:  Tina Junne; Lucyna Kocik; Martin Spiess
Journal:  Mol Biol Cell       Date:  2010-03-31       Impact factor: 4.138

9.  The structure of the eukaryotic ribosome at 3.0 Å resolution.

Authors:  Adam Ben-Shem; Nicolas Garreau de Loubresse; Sergey Melnikov; Lasse Jenner; Gulnara Yusupova; Marat Yusupov
Journal:  Science       Date:  2011-11-17       Impact factor: 47.728

10.  Orientational preferences of neighboring helices can drive ER insertion of a marginally hydrophobic transmembrane helix.

Authors:  Karin Ojemalm; Katrin K Halling; Ingmarie Nilsson; Gunnar von Heijne
Journal:  Mol Cell       Date:  2012-01-25       Impact factor: 17.970

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  139 in total

1.  Impact of holdase chaperones Skp and SurA on the folding of β-barrel outer-membrane proteins.

Authors:  Johannes Thoma; Björn M Burmann; Sebastian Hiller; Daniel J Müller
Journal:  Nat Struct Mol Biol       Date:  2015-09-07       Impact factor: 15.369

Review 2.  Implications of aromatic-aromatic interactions: From protein structures to peptide models.

Authors:  Kamlesh Madhusudan Makwana; Radhakrishnan Mahalakshmi
Journal:  Protein Sci       Date:  2015-10-07       Impact factor: 6.725

3.  Mapping the energy landscape for second-stage folding of a single membrane protein.

Authors:  Duyoung Min; Robert E Jefferson; James U Bowie; Tae-Young Yoon
Journal:  Nat Chem Biol       Date:  2015-10-19       Impact factor: 15.040

Review 4.  Energy coupling mechanisms of MFS transporters.

Authors:  Xuejun C Zhang; Yan Zhao; Jie Heng; Daohua Jiang
Journal:  Protein Sci       Date:  2015-09-18       Impact factor: 6.725

5.  Sec61: A static framework for membrane-protein insertion.

Authors:  Stefan Pfeffer; Friedrich Förster
Journal:  Channels (Austin)       Date:  2015-12-15       Impact factor: 2.581

6.  Type 3 Secretion Translocators Spontaneously Assemble a Hexadecameric Transmembrane Complex.

Authors:  Fabian B Romano; Yuzhou Tang; Kyle C Rossi; Kathryn R Monopoli; Jennifer L Ross; Alejandro P Heuck
Journal:  J Biol Chem       Date:  2016-01-19       Impact factor: 5.157

Review 7.  Lipid-Assisted Membrane Protein Folding and Topogenesis.

Authors:  William Dowhan; Heidi Vitrac; Mikhail Bogdanov
Journal:  Protein J       Date:  2019-06       Impact factor: 2.371

8.  Interaction of the Mechanosensitive Channel, MscS, with the Membrane Bilayer through Lipid Intercalation into Grooves and Pockets.

Authors:  Tim Rasmussen; Akiko Rasmussen; Limin Yang; Corinna Kaul; Susan Black; Heloisa Galbiati; Stuart J Conway; Samantha Miller; Paul Blount; Ian Rylance Booth
Journal:  J Mol Biol       Date:  2019-06-04       Impact factor: 5.469

9.  Membrane insertion of a Tc toxin in near-atomic detail.

Authors:  Christos Gatsogiannis; Felipe Merino; Daniel Prumbaum; Daniel Roderer; Franziska Leidreiter; Dominic Meusch; Stefan Raunser
Journal:  Nat Struct Mol Biol       Date:  2016-08-29       Impact factor: 15.369

10.  Effects of mixed proximal and distal topogenic signals on the topological sensitivity of a membrane protein to the lipid environment.

Authors:  Heidi Vitrac; William Dowhan; Mikhail Bogdanov
Journal:  Biochim Biophys Acta Biomembr       Date:  2017-04-19       Impact factor: 3.747

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