Literature DB >> 31778819

Correction of respiratory artifacts in MRI head motion estimates.

Damien A Fair1, Oscar Miranda-Dominguez2, Abraham Z Snyder3, Anders Perrone2, Eric A Earl2, Andrew N Van4, Jonathan M Koller5, Eric Feczko6, M Dylan Tisdall7, Andre van der Kouwe8, Rachel L Klein9, Amy E Mirro10, Jacqueline M Hampton5, Babatunde Adeyemo11, Timothy O Laumann5, Caterina Gratton12, Deanna J Greene13, Bradley L Schlaggar14, Donald J Hagler15, Richard Watts16, Hugh Garavan17, Deanna M Barch18, Joel T Nigg19, Steven E Petersen20, Anders M Dale21, Sarah W Feldstein-Ewing9, Bonnie J Nagel19, Nico U F Dosenbach22.   

Abstract

Head motion represents one of the greatest technical obstacles in magnetic resonance imaging (MRI) of the human brain. Accurate detection of artifacts induced by head motion requires precise estimation of movement. However, head motion estimates may be corrupted by artifacts due to magnetic main field fluctuations generated by body motion. In the current report, we examine head motion estimation in multiband resting state functional connectivity MRI (rs-fcMRI) data from the Adolescent Brain and Cognitive Development (ABCD) Study and comparison 'single-shot' datasets. We show that respirations contaminate movement estimates in functional MRI and that respiration generates apparent head motion not associated with functional MRI quality reductions. We have developed a novel approach using a band-stop filter that accurately removes these respiratory effects from motion estimates. Subsequently, we demonstrate that utilizing a band-stop filter improves post-processing fMRI data quality. Lastly, we demonstrate the real-time implementation of motion estimate filtering in our FIRMM (Framewise Integrated Real-Time MRI Monitoring) software package.
Copyright © 2019 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Year:  2019        PMID: 31778819      PMCID: PMC7307712          DOI: 10.1016/j.neuroimage.2019.116400

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  77 in total

1.  Respiration-induced B0 fluctuations and their spatial distribution in the human brain at 7 Tesla.

Authors:  Pierre-François Van de Moortele; Josef Pfeuffer; Gary H Glover; Kamil Ugurbil; Xiaoping Hu
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Review 2.  Advances in functional and structural MR image analysis and implementation as FSL.

Authors:  Stephen M Smith; Mark Jenkinson; Mark W Woolrich; Christian F Beckmann; Timothy E J Behrens; Heidi Johansen-Berg; Peter R Bannister; Marilena De Luca; Ivana Drobnjak; David E Flitney; Rami K Niazy; James Saunders; John Vickers; Yongyue Zhang; Nicola De Stefano; J Michael Brady; Paul M Matthews
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

3.  Prospective motion correction with volumetric navigators (vNavs) reduces the bias and variance in brain morphometry induced by subject motion.

Authors:  M Dylan Tisdall; Martin Reuter; Abid Qureshi; Randy L Buckner; Bruce Fischl; André J W van der Kouwe
Journal:  Neuroimage       Date:  2015-12-02       Impact factor: 6.556

4.  Cortical surface-based analysis. I. Segmentation and surface reconstruction.

Authors:  A M Dale; B Fischl; M I Sereno
Journal:  Neuroimage       Date:  1999-02       Impact factor: 6.556

5.  Distinctions among real and apparent respiratory motions in human fMRI data.

Authors:  Jonathan D Power; Charles J Lynch; Benjamin M Silver; Marc J Dubin; Alex Martin; Rebecca M Jones
Journal:  Neuroimage       Date:  2019-07-22       Impact factor: 6.556

6.  Unbiased average age-appropriate atlases for pediatric studies.

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Journal:  Neuroimage       Date:  2010-07-23       Impact factor: 6.556

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Journal:  Proc Natl Acad Sci U S A       Date:  2000-09-26       Impact factor: 11.205

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Authors:  L Chen; A T Vu; J Xu; S Moeller; K Ugurbil; E Yacoub; D A Feinberg
Journal:  Neuroimage       Date:  2014-10-18       Impact factor: 6.556

9.  Integrated strategy for improving functional connectivity mapping using multiecho fMRI.

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Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-13       Impact factor: 11.205

10.  A wavelet method for modeling and despiking motion artifacts from resting-state fMRI time series.

Authors:  Ameera X Patel; Prantik Kundu; Mikail Rubinov; P Simon Jones; Petra E Vértes; Karen D Ersche; John Suckling; Edward T Bullmore
Journal:  Neuroimage       Date:  2014-03-21       Impact factor: 6.556

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  48 in total

1.  Removal of high frequency contamination from motion estimates in single-band fMRI saves data without biasing functional connectivity.

Authors:  Caterina Gratton; Ally Dworetsky; Rebecca S Coalson; Babatunde Adeyemo; Timothy O Laumann; Gagan S Wig; Tania S Kong; Gabriele Gratton; Monica Fabiani; Deanna M Barch; Daniel Tranel; Oscar Miranda-Dominguez; Damien A Fair; Nico U F Dosenbach; Abraham Z Snyder; Joel S Perlmutter; Steven E Petersen; Meghan C Campbell
Journal:  Neuroimage       Date:  2020-04-20       Impact factor: 6.556

2.  Correction of respiratory artifacts in MRI head motion estimates.

Authors:  Damien A Fair; Oscar Miranda-Dominguez; Abraham Z Snyder; Anders Perrone; Eric A Earl; Andrew N Van; Jonathan M Koller; Eric Feczko; M Dylan Tisdall; Andre van der Kouwe; Rachel L Klein; Amy E Mirro; Jacqueline M Hampton; Babatunde Adeyemo; Timothy O Laumann; Caterina Gratton; Deanna J Greene; Bradley L Schlaggar; Donald J Hagler; Richard Watts; Hugh Garavan; Deanna M Barch; Joel T Nigg; Steven E Petersen; Anders M Dale; Sarah W Feldstein-Ewing; Bonnie J Nagel; Nico U F Dosenbach
Journal:  Neuroimage       Date:  2019-11-25       Impact factor: 6.556

3.  On the analysis of rapidly sampled fMRI data.

Authors:  Jingyuan E Chen; Jonathan R Polimeni; Saskia Bollmann; Gary H Glover
Journal:  Neuroimage       Date:  2019-02-05       Impact factor: 6.556

4.  Behavioral and Neural Signatures of Working Memory in Childhood.

Authors:  Monica D Rosenberg; Steven A Martinez; Kristina M Rapuano; May I Conley; Alexandra O Cohen; M Daniela Cornejo; Donald J Hagler; Wesley J Meredith; Kevin M Anderson; Tor D Wager; Eric Feczko; Eric Earl; Damien A Fair; Deanna M Barch; Richard Watts; B J Casey
Journal:  J Neurosci       Date:  2020-05-25       Impact factor: 6.167

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Journal:  Neuroimage       Date:  2019-10-18       Impact factor: 6.556

7.  Human Brain Functional Network Organization Is Disrupted After Whole-Brain Radiation Therapy.

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Journal:  Brain Connect       Date:  2020-02

8.  Characteristics of respiratory measures in young adults scanned at rest, including systematic changes and "missed" deep breaths.

Authors:  Jonathan D Power; Charles J Lynch; Marc J Dubin; Benjamin M Silver; Alex Martin; Rebecca M Jones
Journal:  Neuroimage       Date:  2019-10-05       Impact factor: 6.556

9.  Resting-state "physiological networks".

Authors:  Jingyuan E Chen; Laura D Lewis; Catie Chang; Qiyuan Tian; Nina E Fultz; Ned A Ohringer; Bruce R Rosen; Jonathan R Polimeni
Journal:  Neuroimage       Date:  2020-03-05       Impact factor: 6.556

10.  Plasticity and Spontaneous Activity Pulses in Disused Human Brain Circuits.

Authors:  Dillan J Newbold; Timothy O Laumann; Catherine R Hoyt; Jacqueline M Hampton; David F Montez; Ryan V Raut; Mario Ortega; Anish Mitra; Ashley N Nielsen; Derek B Miller; Babatunde Adeyemo; Annie L Nguyen; Kristen M Scheidter; Aaron B Tanenbaum; Andrew N Van; Scott Marek; Bradley L Schlaggar; Alexandre R Carter; Deanna J Greene; Evan M Gordon; Marcus E Raichle; Steven E Petersen; Abraham Z Snyder; Nico U F Dosenbach
Journal:  Neuron       Date:  2020-06-16       Impact factor: 17.173

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