Literature DB >> 31773207

Exploration and genome mining of natural products from marine Streptomyces.

Zhijie Yang1,2, Jianqiao He1,2, Xin Wei1,2, Jianhua Ju1,2, Junying Ma3.   

Abstract

Marine Streptomyces sp. are an important source of bioactive compounds owing to their unique habitats and metabolic pathways. Whole-genome sequencing and bioinformatics analyses have shown that the potential of synthesizing secondary metabolites from marine-derived Streptomyces has been substantially underestimated. Genome mining is an integrated strategy used to discover natural products based on gene cluster sequences and biosynthetic pathways. Its emergence has greatly enhanced the discovery of natural compounds from marine Streptomyces, thereby yielding a large number of bioactive molecules with novel structures and potent activities. In this review, we briefly summarize the current applications of genome mining in marine Streptomyces, such as bioinformatics-based optimization of culture conditions, ribosome engineering, control of regulatory networks, heterologous expression of biosynthetic gene cluster, and combinatorial biosynthesis of natural compounds. Furthermore, we discuss the factors hindering the utilization of marine-derived natural products and conclude with the prospects for this technique.

Entities:  

Keywords:  Genome mining; Marine microorganisms; Natural products; Streptomyces

Mesh:

Substances:

Year:  2019        PMID: 31773207     DOI: 10.1007/s00253-019-10227-0

Source DB:  PubMed          Journal:  Appl Microbiol Biotechnol        ISSN: 0175-7598            Impact factor:   4.813


  5 in total

1.  Genomic Organization of Streptomyces flavotricini NGL1 and Streptomyces erythrochromogenes HMS4 Reveals Differential Plant Beneficial Attributes and Laccase Production Capabilities.

Authors:  Richa Salwan; Randhir Kaur; Vivek Sharma
Journal:  Mol Biotechnol       Date:  2021-11-16       Impact factor: 2.695

2.  Harnessing Rare Actinomycete Interactions and Intrinsic Antimicrobial Resistance Enables Discovery of an Unusual Metabolic Inhibitor.

Authors:  Dylan J McClung; Yongle Du; Dominic J Antonich; Bailey Bonet; Wenjun Zhang; Matthew F Traxler
Journal:  mBio       Date:  2022-05-24       Impact factor: 7.786

Review 3.  Recent Advances in Discovery of Lead Structures from Microbial Natural Products: Genomics- and Metabolomics-Guided Acceleration.

Authors:  Linda Sukmarini
Journal:  Molecules       Date:  2021-04-27       Impact factor: 4.411

4.  Peeling the Layers Away: The Genomic Characterization of Bacillus pumilus 64-1, an Isolate With Antimicrobial Activity From the Marine Sponge Plakina cyanorosea (Porifera, Homoscleromorpha).

Authors:  Jéssyca Freitas-Silva; Bruno Francesco Rodrigues de Oliveira; Felipe de Mello Vigoder; Guilherme Muricy; Alan D W Dobson; Marinella Silva Laport
Journal:  Front Microbiol       Date:  2021-01-08       Impact factor: 5.640

5.  Complete Genome Sequence of Two Deep-Sea Streptomyces Isolates from Madeira Archipelago and Evaluation of Their Biosynthetic Potential.

Authors:  Pedro Albuquerque; Inês Ribeiro; Sofia Correia; Ana Paula Mucha; Paula Tamagnini; Andreia Braga-Henriques; Maria de Fátima Carvalho; Marta V Mendes
Journal:  Mar Drugs       Date:  2021-11-01       Impact factor: 5.118

  5 in total

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