| Literature DB >> 31754448 |
M Paximadis1, S Perez Patrigeon2, R Rajasuriar3, R Tatoud4, E Scully5, P Arbuthnot6.
Abstract
Entities:
Year: 2019 PMID: 31754448 PMCID: PMC6844409
Source DB: PubMed Journal: J Virus Erad ISSN: 2055-6640
| HIV-1 | HBV |
|---|---|
| Disease sustained by replication in T cells and macrophages | Disease sustained by replication in hepatocytes, i.e. hepatotropic |
| Primary infection rarely cleared | Acute infection often cleared in adults |
| Has a latent phase of infection | No latent phase of infection |
| No prophylactic vaccine available | Vaccine effectively protects against new infections |
| Unknown biomarker(s) for a functional cure | Biomarker(s) for a functional cure is known but limited |
|
Chronic infections are established Virus replication cycle includes a reverse transcription step Transmitted by unprotected sex, blood contact, and perinatal transmission Current treatment controls viremia but does not lead to cure, which would require the eradication of HIV-1 provirus and HBV cccDNA Sampling of peripheral blood may not represent all tissue reservoirs in HIV-1 infection and gives a limited view of the HBV reservoir in hepatocytes | |
|
Latency established in rare and/or long-lived cell populations Risks of off-target effects of interventions aimed at eliminating integrated or episomal viral DNA Viral latency established early in the course of HIV-1 disease and with unknown kinetics for HBV; early intervention is unlikely to eliminate the reservoir in either case Difficulty in accessing tissue samples required for the study of persistent virus | |
HBV: hepatitis B virus; cccDNA: covalently closed circular DNA.
| Method/approach | Readouts | Efficiency | Reference |
|---|---|---|---|
| Nested near-full length proviral DNA PCR amplification followed by viral genome sequencing | Frequency, sequence | Low throughput | |
| Pair of qPCR primers quantify likely intact virus by digital droplet PCR (IPDA) | Frequency | High throughput | |
| Near-full length PCR, digital PCR for four viral segments, nested PCR and sequencing | Frequency, sequence | Medium throughput |
PCR: polymerase chain reaction; IPDA: intact proviral DNA assay.
| Biomarker | What it is | What it means |
|---|---|---|
| HBsAg | Viral surface protein | HBV infection or transcriptionally active HBV integration |
| HBsAb or anti-HBs | Antibodies to HBsAg | Effective immune response following infection or HBV vaccination |
| HBcAg | Viral capsid (core) protein | HBV infection |
| HBcAb or anti-HBc | Antibodies to HBcAg | Past or present HBV infection |
| HBeAg | Secreted variant of HBcAg | High HBV replication |
| HBeAb or anti-HBe | Antibodies to HBeAg | Low HBV replication |
| HBV DNA | Viral genome in virus | Active viral replication |
HBV: hepatitis B virus.