Literature DB >> 31738898

Influence of interfacial tryptophan residues on an arginine-flanked transmembrane helix.

Sara J Sustich1, Fahmida Afrose1, Denise V Greathouse1, Roger E Koeppe2.   

Abstract

The transmembrane helices of membrane proteins often are flanked by interfacial charged or aromatic residues that potentially help to anchor the membrane-spanning protein. For isolated single-span helices, the interfacial residues may be especially important for stabilizing particular tilted transmembrane orientations. The peptide RWALP23 (acetyl-GR2ALW(LA)6LWLAR22A-amide) has been employed to investigate the interplay between interfacial arginines and tryptophans. Here we replace the tryptophans of RWALP23 with A5 and A19, to investigate arginines alone with respect to helix fraying and orientation in varying lipid bilayers. Deuterated alanines incorporated into the central sequence allow the orientation and stability of the core helix to be assessed by means of solid -state 2H NMR in bilayers of DOPC, DMPC and DLPC. The helix tilt from the bilayer normal is found to increase slightly when R2 and R22 are present, and increases still further when the tryptophans W5 and W19 are replaced by alanines. The extent of helix dynamic averaging remains low in all cases. The preferred helix azimuthal rotation is essentially constant for all of the helices in each of the lipid membranes considered here. The alanines located outside of the core region of the peptide are sensitive to helical integrity. The new alanines, A5 and A19, therefore, provide new information about the length of the core helix and the onset of unraveling of the terminals. Residue A19 remains essentially on the central helix in each lipid membrane, while residues A3, A5 and A21 deviate from the core helix to an extent that depends on the membrane thickness. Differential unraveling of the two ends to expose peptide backbone groups for hydrogen bonding therefore acts together with specific interfacial side chains to stabilize a transmembrane helix.
Copyright © 2019 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Arginine; Deuterium NMR; GALA; Transmembrane helix unwinding; Tryptophan

Mesh:

Substances:

Year:  2019        PMID: 31738898      PMCID: PMC6943188          DOI: 10.1016/j.bbamem.2019.183134

Source DB:  PubMed          Journal:  Biochim Biophys Acta Biomembr        ISSN: 0005-2736            Impact factor:   3.747


  39 in total

1.  The penultimate rotamer library.

Authors:  S C Lovell; J M Word; J S Richardson; D C Richardson
Journal:  Proteins       Date:  2000-08-15

Review 2.  How proteins adapt to a membrane-water interface.

Authors:  J A Killian; G von Heijne
Journal:  Trends Biochem Sci       Date:  2000-09       Impact factor: 13.807

3.  Temperature dependence of structure, bending rigidity, and bilayer interactions of dioleoylphosphatidylcholine bilayers.

Authors:  Jianjun Pan; Stephanie Tristram-Nagle; Norbert Kucerka; John F Nagle
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4.  Fluid phase lipid areas and bilayer thicknesses of commonly used phosphatidylcholines as a function of temperature.

Authors:  Norbert Kučerka; Mu-Ping Nieh; John Katsaras
Journal:  Biochim Biophys Acta       Date:  2011-07-23

5.  Transmembrane Helix Integrity versus Fraying To Expose Hydrogen Bonds at a Membrane-Water Interface.

Authors:  Fahmida Afrose; Matthew J McKay; Armin Mortazavi; Vasupradha Suresh Kumar; Denise V Greathouse; Roger E Koeppe
Journal:  Biochemistry       Date:  2019-01-03       Impact factor: 3.162

6.  Breaking the Backbone: Central Arginine Residues Induce Membrane Exit and Helix Distortions within a Dynamic Membrane Peptide.

Authors:  Matthew J McKay; Riqiang Fu; Denise V Greathouse; Roger E Koeppe
Journal:  J Phys Chem B       Date:  2019-09-17       Impact factor: 2.991

Review 7.  Helix formation and stability in membranes.

Authors:  Matthew J McKay; Fahmida Afrose; Roger E Koeppe; Denise V Greathouse
Journal:  Biochim Biophys Acta Biomembr       Date:  2018-02-13       Impact factor: 3.747

8.  Buried lysine, but not arginine, titrates and alters transmembrane helix tilt.

Authors:  Nicholas J Gleason; Vitaly V Vostrikov; Denise V Greathouse; Roger E Koeppe
Journal:  Proc Natl Acad Sci U S A       Date:  2013-01-14       Impact factor: 11.205

9.  Phosphate-mediated arginine insertion into lipid membranes and pore formation by a cationic membrane peptide from solid-state NMR.

Authors:  Ming Tang; Alan J Waring; Mei Hong
Journal:  J Am Chem Soc       Date:  2007-08-18       Impact factor: 15.419

10.  Lonely arginine seeks friendly environment.

Authors:  Benoit Roux
Journal:  J Gen Physiol       Date:  2007-07-16       Impact factor: 4.086

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