Literature DB >> 30565458

Transmembrane Helix Integrity versus Fraying To Expose Hydrogen Bonds at a Membrane-Water Interface.

Fahmida Afrose1, Matthew J McKay1, Armin Mortazavi1, Vasupradha Suresh Kumar1, Denise V Greathouse1, Roger E Koeppe1.   

Abstract

Transmembrane helices dominate the landscape for many membrane proteins. Often flanked by interfacial aromatic residues, these transmembrane helices also contain loops and interhelix segments, which could help in stabilizing a transmembrane orientation. Using 2H nuclear magnetic resonance spectroscopy to monitor bilayer-incorporated model GWALP23 family peptides, we address systematically the issue of helix fraying in relation to the dynamics and orientation of highly similar individual transmembrane helices. We inserted aromatic (Phe, Trp, Tyr, and His) or non-aromatic residues (Ala and Gly) into positions 4 and 5 adjacent to a core transmembrane helix to examine the side-chain dependency of the transmembrane orientation, dynamics, and helix integrity (extent and location of unraveling). Incorporation of [2H]alanine labels enables one to assess the helicity of the core sequence and the peptide termini. For most of the helices, we observed substantial unwinding involving at least three residues at both ends. For the unique case of histidine at positions 4 and 5, an extended N-terminal unwinding was observed up to residue 7. For further investigation of the onset of fraying, we employed A4,5GWALP23 with 2H labels at residues 4 and 5 and found that the number of terminal residues involved in the unwinding depends on bilayer thicknesses and helps to govern the helix dynamics. The combined results enable us to compare and contrast the extent of fraying for each related helix, as reflected by the deviation of experimental 2H quadrupolar splitting magnitudes of juxta-terminal alanines A3 and A21 from those represented by an ideal helix geometry.

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Year:  2019        PMID: 30565458      PMCID: PMC6372336          DOI: 10.1021/acs.biochem.8b01119

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  5 in total

1.  Influence of Lipid Saturation, Hydrophobic Length and Cholesterol on Double-Arginine-Containing Helical Peptides in Bilayer Membranes.

Authors:  Karli Lipinski; Matthew J McKay; Fahmida Afrose; Ashley N Martfeld; Roger E Koeppe; Denise V Greathouse
Journal:  Chembiochem       Date:  2019-09-18       Impact factor: 3.164

2.  Breaking the Backbone: Central Arginine Residues Induce Membrane Exit and Helix Distortions within a Dynamic Membrane Peptide.

Authors:  Matthew J McKay; Riqiang Fu; Denise V Greathouse; Roger E Koeppe
Journal:  J Phys Chem B       Date:  2019-09-17       Impact factor: 2.991

3.  Influence of interfacial tryptophan residues on an arginine-flanked transmembrane helix.

Authors:  Sara J Sustich; Fahmida Afrose; Denise V Greathouse; Roger E Koeppe
Journal:  Biochim Biophys Acta Biomembr       Date:  2019-11-16       Impact factor: 3.747

4.  Comparing Interfacial Trp, Interfacial His and pH Dependence for the Anchoring of Tilted Transmembrane Helical Peptides.

Authors:  Fahmida Afrose; Roger E Koeppe Ii
Journal:  Biomolecules       Date:  2020-02-11

5.  Lipid-Dependent Titration of Glutamic Acid at a Bilayer Membrane Interface.

Authors:  Matthew J McKay; Kelsey A Marr; Jake R Price; Denise V Greathouse; Roger E Koeppe
Journal:  ACS Omega       Date:  2021-03-17
  5 in total

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