| Literature DB >> 31709082 |
M Beemarao1, S Silambarasan2, A Jamal Abdul Nasser2, M Purushothaman2, K Ravichandran1.
Abstract
The benzo-pyran ring of the title com-pound, C16H11ClN2O2, is planar [maximum deviation = 0.079 (2) Å] and is almost perpendicular to the chloro-phenyl ring [dihedral angle = 86.85 (6)°]. In the crystal, N-H⋯O, O-H⋯N, C-H⋯O and C-H⋯Cl hydrogen bonds form inter- and intra-molecular inter-actions. The DFT/B3LYP/6-311G(d,p) method was used to determine the HOMO-LUMO energy levels. The mol-ecular electrostatic potential surfaces were investigated by Hirshfeld surface analysis and two-dimensional fingerprint plots were used to analyse the inter-molecular inter-actions in the mol-ecule. © Beemarao et al. 2019.Entities:
Keywords: Hirshfeld surface analysis; crystal structure; density functional theory; hydrogen bonding; pyran
Year: 2019 PMID: 31709082 PMCID: PMC6829740 DOI: 10.1107/S2056989019013537
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1The molecular structure of the title compound, showing the atom-numbering scheme and displacement ellipsoids drawn at the 30% probability level. The intramolecular C4—H4⋯Cl1 hydrogen bond is drawn as a dashed line.
Hydrogen-bond geometry (Å, °)
Cg1, Cg3 and Cg4 are the centroids of the O1/C2–C5/C10 ring, the C11–C16 ring and the benzopyran system, respectively.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.86 | 2.19 | 3.037 (2) | 167 |
| C9—H9⋯O1i | 0.93 | 2.50 | 3.416 (2) | 168 |
| O2—H2⋯N2ii | 0.82 | 1.99 | 2.773 (2) | 160 |
| C4—H4⋯Cl1 | 0.98 | 2.58 | 3.102 (2) | 113 |
| C12—H12⋯ | 0.93 | 2.74 | 3.085 (2) | 103 |
| C12—H12⋯ | 0.93 | 2.83 | 3.291 (2) | 112 |
| C14—H14⋯ | 0.93 | 2.85 | 3.494 (2) | 127 |
Symmetry codes: (i) ; (ii) ; (iii) .
Figure 2The crystal packing of the title compound, showing an (16) motif and the C(8) chain formed via a pair of O—H⋯N and N—H⋯O hydrogen bonds.
Figure 3Part of the crystal structure showing the (8) dimers. H atoms not involved in hydrogen bonding (dashed lines) have been omitted for clarity.
Figure 4The overall crystal packing of the title compound, viewed along the a-axis direction.
Figure 5The frontier molecular orbitals (FMOs) of the title compound.
Figure 6Hirshfeld surface mapped over d norm in the range −0.6146 to 1.6047 a.u.
Figure 7The 2D fingerprint plots for the title compound.
Experimental details
| Crystal data | |
| Chemical formula | C16H11ClN2O2 |
|
| 298.72 |
| Crystal system, space group | Monoclinic, |
| Temperature (K) | 296 |
|
| 6.6658 (3), 30.1600 (16), 7.2193 (4) |
| β (°) | 106.088 (2) |
|
| 1394.53 (12) |
|
| 4 |
| Radiation type | Mo |
| μ (mm−1) | 0.28 |
| Crystal size (mm) | 0.15 × 0.10 × 0.10 |
| Data collection | |
| Diffractometer | Bruker SMART APEXII CCD |
| Absorption correction | Multi-scan ( |
|
| 0.959, 0.973 |
| No. of measured, independent and observed [ | 21888, 2941, 2115 |
|
| 0.034 |
| (sin θ/λ)max (Å−1) | 0.632 |
| Refinement | |
|
| 0.037, 0.103, 1.05 |
| No. of reflections | 2941 |
| No. of parameters | 191 |
| H-atom treatment | H-atom parameters constrained |
| Δρmax, Δρmin (e Å−3) | 0.19, −0.29 |
Computer programs: APEX2 (Bruker, 2008 ▸), SAINT (Bruker, 2008 ▸), SHELXS97 (Sheldrick, 2008 ▸), SHELXL2018 (Sheldrick, 2015 ▸), ORTEP-3 (Farrugia, 2012 ▸), SHELXL97 (Sheldrick, 2008 ▸) and PLATON (Spek, 2009 ▸).
| C16H11ClN2O2 | |
| Monoclinic, | Mo |
| Cell parameters from 2115 reflections | |
| θ = 2.7–26.7° | |
| µ = 0.28 mm−1 | |
| β = 106.088 (2)° | |
| Block, white crystalline | |
| 0.15 × 0.10 × 0.10 mm |
| Bruker SMART APEXII CCD diffractometer | 2115 reflections with |
| Radiation source: fine-focus sealed tube | |
| ω and φ scans | θmax = 26.7°, θmin = 2.7° |
| Absorption correction: multi-scan ( | |
| 21888 measured reflections | |
| 2941 independent reflections |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| (Δ/σ)max = 0.001 | |
| Δρmax = 0.19 e Å−3 | |
| 2941 reflections | Δρmin = −0.28 e Å−3 |
| 191 parameters | Extinction correction: SHELXL2018 (Sheldrick, 2015), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| 0 restraints | Extinction coefficient: 0.0061 (13) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| C2 | 0.9057 (3) | 0.54802 (6) | −0.1320 (2) | 0.0342 (4) | |
| C3 | 1.0377 (3) | 0.58264 (5) | −0.0758 (2) | 0.0334 (4) | |
| C4 | 1.0200 (3) | 0.61567 (5) | 0.0772 (2) | 0.0314 (4) | |
| H4 | 1.156330 | 0.618094 | 0.172872 | 0.038* | |
| C5 | 0.8634 (3) | 0.59885 (5) | 0.1766 (2) | 0.0314 (4) | |
| C6 | 0.8329 (3) | 0.62022 (6) | 0.3376 (3) | 0.0379 (4) | |
| H6 | 0.915142 | 0.644648 | 0.387878 | 0.045* | |
| C7 | 0.6839 (3) | 0.60615 (6) | 0.4248 (3) | 0.0408 (4) | |
| H7 | 0.665264 | 0.621197 | 0.531266 | 0.049* | |
| C8 | 0.5627 (3) | 0.56954 (6) | 0.3525 (3) | 0.0379 (4) | |
| C9 | 0.5916 (3) | 0.54711 (6) | 0.1960 (3) | 0.0398 (4) | |
| H9 | 0.512626 | 0.522076 | 0.148322 | 0.048* | |
| C10 | 0.7398 (3) | 0.56246 (6) | 0.1111 (2) | 0.0335 (4) | |
| C11 | 0.9601 (3) | 0.66108 (5) | −0.0142 (2) | 0.0322 (4) | |
| C12 | 0.7556 (3) | 0.66946 (6) | −0.1204 (3) | 0.0400 (4) | |
| H12 | 0.654979 | 0.647668 | −0.127966 | 0.048* | |
| C13 | 0.6976 (4) | 0.70909 (7) | −0.2149 (3) | 0.0539 (5) | |
| H13 | 0.559727 | 0.713738 | −0.285481 | 0.065* | |
| C14 | 0.8442 (4) | 0.74176 (7) | −0.2045 (4) | 0.0621 (6) | |
| H14 | 0.805563 | 0.768466 | −0.268905 | 0.075* | |
| C15 | 1.0465 (4) | 0.73504 (7) | −0.0995 (4) | 0.0600 (6) | |
| H15 | 1.145714 | 0.757164 | −0.091365 | 0.072* | |
| C16 | 1.1027 (3) | 0.69495 (6) | −0.0052 (3) | 0.0446 (5) | |
| C17 | 1.1869 (3) | 0.58941 (6) | −0.1782 (3) | 0.0402 (4) | |
| O1 | 0.7539 (2) | 0.53801 (4) | −0.04856 (18) | 0.0420 (3) | |
| O2 | 0.4103 (2) | 0.55394 (5) | 0.4287 (2) | 0.0552 (4) | |
| H2 | 0.406537 | 0.569128 | 0.521925 | 0.083* | |
| Cl1 | 1.36070 (9) | 0.68831 (2) | 0.12960 (12) | 0.0757 (2) | |
| N1 | 0.9057 (3) | 0.51897 (5) | −0.2734 (2) | 0.0455 (4) | |
| H1A | 0.816166 | 0.497735 | −0.298713 | 0.055* | |
| H1B | 0.995343 | 0.521634 | −0.338516 | 0.055* | |
| N2 | 1.3050 (3) | 0.59408 (7) | −0.2655 (3) | 0.0608 (5) |
| C2 | 0.0376 (10) | 0.0333 (9) | 0.0359 (9) | 0.0032 (7) | 0.0174 (8) | −0.0023 (7) |
| C3 | 0.0336 (9) | 0.0322 (9) | 0.0385 (10) | 0.0028 (7) | 0.0169 (8) | −0.0012 (7) |
| C4 | 0.0314 (9) | 0.0305 (9) | 0.0334 (9) | −0.0007 (7) | 0.0110 (7) | −0.0026 (7) |
| C5 | 0.0339 (9) | 0.0306 (9) | 0.0310 (9) | 0.0025 (7) | 0.0113 (7) | 0.0014 (7) |
| C6 | 0.0474 (11) | 0.0339 (9) | 0.0335 (9) | −0.0043 (8) | 0.0132 (8) | −0.0054 (7) |
| C7 | 0.0556 (12) | 0.0392 (10) | 0.0332 (10) | 0.0003 (9) | 0.0215 (9) | −0.0050 (8) |
| C8 | 0.0423 (10) | 0.0419 (10) | 0.0349 (10) | −0.0008 (8) | 0.0198 (8) | 0.0007 (8) |
| C9 | 0.0442 (11) | 0.0394 (10) | 0.0403 (10) | −0.0071 (8) | 0.0192 (9) | −0.0085 (8) |
| C10 | 0.0391 (10) | 0.0340 (9) | 0.0308 (9) | 0.0008 (7) | 0.0155 (8) | −0.0042 (7) |
| C11 | 0.0384 (10) | 0.0298 (8) | 0.0329 (9) | −0.0008 (7) | 0.0172 (8) | −0.0043 (7) |
| C12 | 0.0434 (11) | 0.0373 (10) | 0.0395 (10) | −0.0014 (8) | 0.0117 (9) | −0.0021 (8) |
| C13 | 0.0610 (14) | 0.0490 (12) | 0.0493 (12) | 0.0128 (10) | 0.0113 (10) | 0.0079 (10) |
| C14 | 0.0862 (18) | 0.0437 (12) | 0.0623 (15) | 0.0089 (12) | 0.0303 (13) | 0.0165 (11) |
| C15 | 0.0759 (16) | 0.0375 (11) | 0.0783 (16) | −0.0104 (11) | 0.0407 (14) | 0.0059 (11) |
| C16 | 0.0445 (11) | 0.0405 (10) | 0.0554 (12) | −0.0057 (8) | 0.0248 (10) | −0.0037 (9) |
| C17 | 0.0408 (11) | 0.0408 (10) | 0.0433 (11) | −0.0024 (8) | 0.0188 (9) | −0.0082 (8) |
| O1 | 0.0484 (8) | 0.0419 (7) | 0.0444 (7) | −0.0136 (6) | 0.0274 (6) | −0.0159 (6) |
| O2 | 0.0659 (10) | 0.0596 (9) | 0.0547 (9) | −0.0182 (7) | 0.0409 (8) | −0.0158 (7) |
| Cl1 | 0.0392 (3) | 0.0653 (4) | 0.1207 (6) | −0.0156 (3) | 0.0190 (3) | −0.0037 (4) |
| N1 | 0.0532 (10) | 0.0422 (9) | 0.0511 (10) | −0.0077 (8) | 0.0309 (8) | −0.0147 (7) |
| N2 | 0.0571 (12) | 0.0748 (13) | 0.0627 (12) | −0.0146 (10) | 0.0368 (10) | −0.0200 (10) |
| C2—N1 | 1.345 (2) | C9—H9 | 0.9300 |
| C2—O1 | 1.347 (2) | C10—O1 | 1.3932 (19) |
| C2—C3 | 1.353 (2) | C11—C16 | 1.385 (2) |
| C3—C17 | 1.408 (2) | C11—C12 | 1.389 (2) |
| C3—C4 | 1.516 (2) | C12—C13 | 1.377 (3) |
| C4—C5 | 1.509 (2) | C12—H12 | 0.9300 |
| C4—C11 | 1.525 (2) | C13—C14 | 1.375 (3) |
| C4—H4 | 0.9800 | C13—H13 | 0.9300 |
| C5—C10 | 1.375 (2) | C14—C15 | 1.367 (3) |
| C5—C6 | 1.393 (2) | C14—H14 | 0.9300 |
| C6—C7 | 1.382 (3) | C15—C16 | 1.387 (3) |
| C6—H6 | 0.9300 | C15—H15 | 0.9300 |
| C7—C8 | 1.382 (3) | C16—Cl1 | 1.737 (2) |
| C7—H7 | 0.9300 | C17—N2 | 1.146 (2) |
| C8—O2 | 1.366 (2) | O2—H2 | 0.8200 |
| C8—C9 | 1.376 (2) | N1—H1A | 0.8600 |
| C9—C10 | 1.379 (2) | N1—H1B | 0.8600 |
| N1—C2—O1 | 110.58 (15) | C5—C10—C9 | 123.36 (16) |
| N1—C2—C3 | 126.39 (16) | C5—C10—O1 | 122.36 (15) |
| O1—C2—C3 | 123.03 (15) | C9—C10—O1 | 114.28 (15) |
| C2—C3—C17 | 116.70 (15) | C16—C11—C12 | 116.58 (17) |
| C2—C3—C4 | 123.38 (15) | C16—C11—C4 | 123.24 (16) |
| C17—C3—C4 | 119.72 (15) | C12—C11—C4 | 120.11 (15) |
| C5—C4—C3 | 109.23 (13) | C13—C12—C11 | 121.94 (18) |
| C5—C4—C11 | 112.01 (13) | C13—C12—H12 | 119.0 |
| C3—C4—C11 | 109.81 (13) | C11—C12—H12 | 119.0 |
| C5—C4—H4 | 108.6 | C14—C13—C12 | 119.8 (2) |
| C3—C4—H4 | 108.6 | C14—C13—H13 | 120.1 |
| C11—C4—H4 | 108.6 | C12—C13—H13 | 120.1 |
| C10—C5—C6 | 116.37 (15) | C15—C14—C13 | 120.1 (2) |
| C10—C5—C4 | 122.16 (15) | C15—C14—H14 | 120.0 |
| C6—C5—C4 | 121.44 (15) | C13—C14—H14 | 120.0 |
| C7—C6—C5 | 121.86 (17) | C14—C15—C16 | 119.5 (2) |
| C7—C6—H6 | 119.1 | C14—C15—H15 | 120.3 |
| C5—C6—H6 | 119.1 | C16—C15—H15 | 120.3 |
| C6—C7—C8 | 119.46 (16) | C11—C16—C15 | 122.1 (2) |
| C6—C7—H7 | 120.3 | C11—C16—Cl1 | 120.11 (15) |
| C8—C7—H7 | 120.3 | C15—C16—Cl1 | 117.79 (16) |
| O2—C8—C9 | 116.76 (16) | N2—C17—C3 | 178.0 (2) |
| O2—C8—C7 | 123.03 (16) | C2—O1—C10 | 118.87 (13) |
| C9—C8—C7 | 120.21 (16) | C8—O2—H2 | 109.5 |
| C8—C9—C10 | 118.71 (17) | C2—N1—H1A | 120.0 |
| C8—C9—H9 | 120.6 | C2—N1—H1B | 120.0 |
| C10—C9—H9 | 120.6 | H1A—N1—H1B | 120.0 |
| N1—C2—C3—C17 | 1.4 (3) | C4—C5—C10—O1 | 1.5 (3) |
| O1—C2—C3—C17 | −179.18 (17) | C8—C9—C10—C5 | 1.0 (3) |
| N1—C2—C3—C4 | 176.25 (17) | C8—C9—C10—O1 | −178.75 (16) |
| O1—C2—C3—C4 | −4.3 (3) | C5—C4—C11—C16 | 138.04 (17) |
| C2—C3—C4—C5 | 10.3 (2) | C3—C4—C11—C16 | −100.42 (19) |
| C17—C3—C4—C5 | −175.06 (16) | C5—C4—C11—C12 | −45.1 (2) |
| C2—C3—C4—C11 | −112.94 (19) | C3—C4—C11—C12 | 76.49 (19) |
| C17—C3—C4—C11 | 61.7 (2) | C16—C11—C12—C13 | 1.1 (3) |
| C3—C4—C5—C10 | −8.7 (2) | C4—C11—C12—C13 | −176.05 (17) |
| C11—C4—C5—C10 | 113.14 (18) | C11—C12—C13—C14 | −0.3 (3) |
| C3—C4—C5—C6 | 172.89 (16) | C12—C13—C14—C15 | −0.5 (3) |
| C11—C4—C5—C6 | −65.2 (2) | C13—C14—C15—C16 | 0.5 (3) |
| C10—C5—C6—C7 | −1.2 (3) | C12—C11—C16—C15 | −1.0 (3) |
| C4—C5—C6—C7 | 177.30 (17) | C4—C11—C16—C15 | 175.98 (18) |
| C5—C6—C7—C8 | 0.8 (3) | C12—C11—C16—Cl1 | 178.20 (13) |
| C6—C7—C8—O2 | −179.04 (18) | C4—C11—C16—Cl1 | −4.8 (2) |
| C6—C7—C8—C9 | 0.5 (3) | C14—C15—C16—C11 | 0.3 (3) |
| O2—C8—C9—C10 | 178.20 (17) | C14—C15—C16—Cl1 | −178.97 (18) |
| C7—C8—C9—C10 | −1.4 (3) | N1—C2—O1—C10 | 175.17 (15) |
| C6—C5—C10—C9 | 0.3 (3) | C3—C2—O1—C10 | −4.3 (3) |
| C4—C5—C10—C9 | −178.19 (17) | C5—C10—O1—C2 | 5.7 (3) |
| C6—C5—C10—O1 | 179.99 (16) | C9—C10—O1—C2 | −174.53 (16) |
| H··· | ||||
| N1—H1 | 0.86 | 2.19 | 3.037 (2) | 167 |
| C9—H9···O1i | 0.93 | 2.50 | 3.416 (2) | 168 |
| O2—H2···N2ii | 0.82 | 1.99 | 2.773 (2) | 160 |
| C4—H4···Cl1 | 0.98 | 2.58 | 3.102 (2) | 113 |
| C12—H12··· | 0.93 | 2.74 | 3.085 (2) | 103 |
| C12—H12··· | 0.93 | 2.83 | 3.291 (2) | 112 |
| C14—H14··· | 0.93 | 2.85 | 3.494 (2) | 127 |