Literature DB >> 31679824

Contemporary Tools for Regulating Gene Expression in Bacteria.

Ross Kent1, Neil Dixon2.   

Abstract

Insights from novel mechanistic paradigms in gene expression control have led to the development of new gene expression systems for bioproduction, control, and sensing applications. Coupled with a greater understanding of synthetic burden and modern creative biodesign approaches, contemporary bacterial gene expression tools and systems are emerging that permit fine-tuning of expression, enabling greater predictability and maximisation of specific productivity, while minimising deleterious effects upon cell viability. These advances have been achieved by using a plethora of regulatory tools, operating at all levels of the so-called 'central dogma' of molecular biology. In this review, we discuss these gene regulation tools in the context of their design, prototyping, integration into expression systems, and biotechnological application.
Copyright © 2019 The Authors. Published by Elsevier Ltd.. All rights reserved.

Keywords:  de-coupling growth and production; dynamic regulation; genetic circuit design; regulatory tools

Mesh:

Substances:

Year:  2019        PMID: 31679824     DOI: 10.1016/j.tibtech.2019.09.007

Source DB:  PubMed          Journal:  Trends Biotechnol        ISSN: 0167-7799            Impact factor:   19.536


  12 in total

1.  Designing and Constructing Artificial Small RNAs for Gene Regulation and Carbon Flux Redirection in Photosynthetic Cyanobacteria.

Authors:  Shubin Li; Tao Sun; Lei Chen; Weiwen Zhang
Journal:  Methods Mol Biol       Date:  2021

Review 2.  Bacterial Small Membrane Proteins: the Swiss Army Knife of Regulators at the Lipid Bilayer.

Authors:  Srujana S Yadavalli; Jing Yuan
Journal:  J Bacteriol       Date:  2021-09-13       Impact factor: 3.476

Review 3.  Engineering rhizobacteria for sustainable agriculture.

Authors:  Timothy L Haskett; Andrzej Tkacz; Philip S Poole
Journal:  ISME J       Date:  2020-11-23       Impact factor: 10.302

4.  Optochemical Control of Bacterial Gene Expression: Novel Photocaged Compounds for Different Promoter Systems.

Authors:  Fabian Hogenkamp; Fabienne Hilgers; Nora Lisa Bitzenhofer; Vera Ophoven; Mona Haase; Claus Bier; Dennis Binder; Karl-Erich Jaeger; Thomas Drepper; Jörg Pietruszka
Journal:  Chembiochem       Date:  2021-12-02       Impact factor: 3.461

5.  Synthetic protein-binding DNA sponge as a tool to tune gene expression and mitigate protein toxicity.

Authors:  Xinyi Wan; Filipe Pinto; Luyang Yu; Baojun Wang
Journal:  Nat Commun       Date:  2020-11-24       Impact factor: 14.919

6.  Scale-up fermentation of Escherichia coli for the production of recombinant endoglucanase from Clostridium thermocellum.

Authors:  Iram Shahzadi; Maryam A Al-Ghamdi; Muhammad Shahid Nadeem; Muhammad Sajjad; Asif Ali; Jalaluddin Azam Khan; Imran Kazmi
Journal:  Sci Rep       Date:  2021-03-30       Impact factor: 4.379

7.  A portable library of phosphate-depletion based synthetic promoters for customable and automata control of gene expression in bacteria.

Authors:  Jesús Torres-Bacete; José Luís García; Juan Nogales
Journal:  Microb Biotechnol       Date:  2021-03-30       Impact factor: 5.813

8.  Accelerating Whole-Cell Simulations of mRNA Translation Using a Dedicated Hardware.

Authors:  David Shallom; Danny Naiger; Shlomo Weiss; Tamir Tuller
Journal:  ACS Synth Biol       Date:  2021-11-23       Impact factor: 5.110

Review 9.  Practical genetic control strategies for industrial bioprocesses.

Authors:  Jonathan C Moore; Itzel Ramos; Stephen Van Dien
Journal:  J Ind Microbiol Biotechnol       Date:  2022-04-14       Impact factor: 4.258

Review 10.  Importance of the 5' regulatory region to bacterial synthetic biology applications.

Authors:  Lisa Tietze; Rahmi Lale
Journal:  Microb Biotechnol       Date:  2021-06-25       Impact factor: 5.813

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