Literature DB >> 34009594

Designing and Constructing Artificial Small RNAs for Gene Regulation and Carbon Flux Redirection in Photosynthetic Cyanobacteria.

Shubin Li1,2,3, Tao Sun1,2,4,5, Lei Chen1,2,3, Weiwen Zhang6,7,8,9,10.   

Abstract

Photosynthetic cyanobacteria are not only model organisms for studying photosynthesis and biological cycling of carbon in biosphere but also potential "green microbial factories" to produce renewable fuels and chemicals, due to their capability to utilizing solar energy and CO2. Therefore, strategies for gene regulation and carbon flux redirection are important for both fundamental research and metabolic engineering of cyanobacteria. To address the challenges, regulatory tools based on artificial small RNAs have been developed with satisfactory effects for single or multiple gene(s) regulation in various cyanobacterial species. When combined with the promoters of varying gradient strength and the inducible switches developed in recent years, it is now feasible to realize precise gene regulation in photosynthetic cyanobacteria for producing fuels and chemicals. Here in this chapter, we provide a detailed introduction of the design principles and constructing methods of the artificial sRNA tools to achieve accurate inducible regulation of cyanobacterial gene(s).

Entities:  

Keywords:  Carbon flux redirection; Cyanobacteria; Gene regulation; Small RNA; Synthetic biology

Year:  2021        PMID: 34009594     DOI: 10.1007/978-1-0716-1323-8_16

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  31 in total

1.  ATP drives direct photosynthetic production of 1-butanol in cyanobacteria.

Authors:  Ethan I Lan; James C Liao
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-02       Impact factor: 11.205

Review 2.  Molecular signatures for the main phyla of photosynthetic bacteria and their subgroups.

Authors:  Radhey S Gupta
Journal:  Photosynth Res       Date:  2010-04-23       Impact factor: 3.573

Review 3.  Cyanobacterial chassis engineering for enhancing production of biofuels and chemicals.

Authors:  Xinyan Gao; Tao Sun; Guangsheng Pei; Lei Chen; Weiwen Zhang
Journal:  Appl Microbiol Biotechnol       Date:  2016-02-17       Impact factor: 4.813

Review 4.  Aquatic phototrophs: efficient alternatives to land-based crops for biofuels.

Authors:  G Charles Dismukes; Damian Carrieri; Nicholas Bennette; Gennady M Ananyev; Matthew C Posewitz
Journal:  Curr Opin Biotechnol       Date:  2008-06-06       Impact factor: 9.740

5.  Metabolic engineering of Synechocystis sp. PCC 6803 for enhanced ethanol production based on flux balance analysis.

Authors:  Katsunori Yoshikawa; Yoshihiro Toya; Hiroshi Shimizu
Journal:  Bioprocess Biosyst Eng       Date:  2017-03-03       Impact factor: 3.210

6.  Metabolic engineering of Synechococcus sp. PCC 7002 to produce poly-3-hydroxybutyrate and poly-3-hydroxybutyrate-co-4-hydroxybutyrate.

Authors:  Shuyi Zhang; Yang Liu; Donald A Bryant
Journal:  Metab Eng       Date:  2015-10-22       Impact factor: 9.783

7.  Single-Stage Astaxanthin Production Enhances the Nonmevalonate Pathway and Photosynthetic Central Metabolism in Synechococcus sp. PCC 7002.

Authors:  Tomohisa Hasunuma; Ayako Takaki; Mami Matsuda; Yuichi Kato; Christopher J Vavricka; Akihiko Kondo
Journal:  ACS Synth Biol       Date:  2019-11-08       Impact factor: 5.110

8.  krCRISPR: an easy and efficient strategy for generating conditional knockout of essential genes in cells.

Authors:  Bei Wang; Zishi Wang; Daqi Wang; Baolong Zhang; Sang-Ging Ong; Mingqing Li; Wenqiang Yu; Yongming Wang
Journal:  J Biol Eng       Date:  2019-04-24       Impact factor: 4.355

9.  Biosynthesis of platform chemical 3-hydroxypropionic acid (3-HP) directly from CO2 in cyanobacterium Synechocystis sp. PCC 6803.

Authors:  Yunpeng Wang; Tao Sun; Xingyan Gao; Mengliang Shi; Lina Wu; Lei Chen; Weiwen Zhang
Journal:  Metab Eng       Date:  2015-11-09       Impact factor: 9.783

10.  The potential of Synechococcus elongatus UTEX 2973 for sugar feedstock production.

Authors:  Kuo Song; Xiaoming Tan; Yajing Liang; Xuefeng Lu
Journal:  Appl Microbiol Biotechnol       Date:  2016-04-14       Impact factor: 4.813

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