| Literature DB >> 31664443 |
Nicholas A Turner1,2, Steven C Grambow3, Christopher W Woods1,4, Vance G Fowler1, Rebekah W Moehring1,2, Deverick J Anderson1,2, Sarah S Lewis1,2.
Abstract
Importance: Clostridioides difficile infection (CDI) remains a leading cause of health care facility-associated infection. A greater understanding of the regional epidemiologic profile of CDI could inform targeted prevention strategies.Entities:
Mesh:
Year: 2019 PMID: 31664443 PMCID: PMC6824221 DOI: 10.1001/jamanetworkopen.2019.14149
Source DB: PubMed Journal: JAMA Netw Open ISSN: 2574-3805
Figure 1. Flow Diagram of Clostridioides difficile Infection (CDI) Cases
Characteristics of Included Hospitals
| Variable | No. (%) |
|---|---|
| Total included, No. | 43 |
| Licensed beds, median (IQR), No. | 210 (141-303) |
| Monthly admissions, median (IQR), No. | 775 (422-1242) |
| Geographic location | |
| Florida | 2 (5) |
| Georgia | 9 (21) |
| North Carolina | 23 (54) |
| South Carolina | 3 (7) |
| Virginia | 5 (12) |
| West Virginia | 1 (2) |
| Setting | |
| Urban | 29 (67) |
| Rural | 14 (33) |
| Type | |
| Teaching or academic | 18 (42) |
| Community | 25 (58) |
| Toxin enzyme immunoassay only | 5 (12) |
| Transitioned from toxin enzyme immunoassay to NAAT | 13 (30) |
| NAAT only | 25 (58) |
| Hospitals reporting NAP1 strain incidence | 26 (61) |
Abbreviations: IQR, interquartile range; NAAT, nucleic acid amplification testing.
Figure 2. Observed Trends in Clostridioides difficile Infection (CDI) Incidence by Year in 43 Included Hospitals
Solid line indicates unadjusted median; gray shaded area, interquartile range.
Model-Based Measurement Estimates
| Variable | Adjustment | Fixed Effects | IRR or OR (95% CI) | |
|---|---|---|---|---|
| Incidence models | ||||
| Community-acquired CDI | Unadjusted | Time, mo | 1.007 (1.001-1.013) | .01 |
| Adjusted | Time, mo | 1.004 (0.999-1.009) | .14 | |
| Setting, urban relative to rural | 0.862 (0.623-1.193) | .37 | ||
| Type, academic vs community | 0.999 (0.738-1.352) | .99 | ||
| Test type (NAAT vs antigen) | 1.919 (1.653-2.228) | <.001 | ||
| Health care facility–associated CDI | Unadjusted | Time, mo | 0.998 (0.993-1.004) | .49 |
| Adjusted | Time, mo | 0.995 (0.990-0.999) | .03 | |
| Setting, urban vs rural | 0.802 (0.631-1.020) | .07 | ||
| Type, academic vs community | 1.026 (0.823-1.278) | .82 | ||
| Test type, NAAT vs antigen | 1.831 (1.591-2.108) | <.001 | ||
| Community-acquired NAP1 strain of CDI | Unadjusted | Time, mo | 1.007 (0.994-1.021) | .31 |
| Health care facility–associated NAP1 strain of CDI | Unadjusted | Time, mo | 1.011 (0.990-1.032) | .32 |
| Proportion model | ||||
| Community-acquired CDI as proportion of total CDI cases | Unadjusted | Time, mo | 1.010 (1.006-1.015) | <.001 |
| Adjusted | Time, mo | 1.010 (1.006-1.014) | <.001 | |
| Setting, urban vs rural | 1.056 (0.815-1.369) | .68 | ||
| Type, academic vs community | 0.847 (0.674-1.065) | .16 | ||
| Test type, NAAT vs antigen | 1.083 (0.904-1.296) | .39 |
Abbreviations: CDI, Clostridioides difficile infection; IRR, incidence rate ratio; NAAT, nucleic acid amplification testing; OR, odds ratio.
Values are IRRs for incidence models and OR for proportion model.
Figure 3. Estimated Trends in Clostridioides difficile Infection (CDI) Incidence Rates Over Time for a Hospital
A and B, Shaded area represents 95% CI for the model, reflecting the degree of variation between health care facilities. Estimated community-acquired CDI incidence is reported for an urban community hospital with a mean of 941 admissions per month using nucleic acid amplification testing (NAAT) CDI testing. Estimated health care facility–associated CDI incidence is reported for an urban community hospital with a mean of 4078 patient-days per month using NAAT CDI testing. C, Scatterplot points represent mean proportion of community-acquired CDI cases compared with total CDI cases across all facilities for each month in the study period. The line indicates modeled proportion of community-acquired CDI cases using mixed-effects logistic regression; shaded area, 95% CI for the model.